RNA–Protein interactions for RNA: ENST00000489030.1

USP11-210, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-210ENST00000489030 OTORQ9NRC9 128 aa8.34□□□□□ -1.07
USP11-210ENST00000489030 APLNQ9ULZ1 77 aa8.34□□□□□ -1.07
USP11-210ENST00000489030 DNAH11Q96DT5 4516 aa8.34□□□□□ -1.07
USP11-210ENST00000489030 FAM74A7A6NL05 159 aa8.33□□□□□ -1.08
USP11-210ENST00000489030 PAGE4O60829 102 aa8.33□□□□□ -1.08
USP11-210ENST00000489030 NMBP08949 121 aa8.33□□□□□ -1.08
USP11-210ENST00000489030 DEFB131AP59861 70 aa8.33□□□□□ -1.08
USP11-210ENST00000489030 UBE2G2P60604 165 aa8.33□□□□□ -1.08
USP11-210ENST00000489030 PSMG4Q5JS54 123 aa8.33□□□□□ -1.08
USP11-210ENST00000489030 CLLU1Q5K131 121 aa8.33□□□□□ -1.08
USP11-210ENST00000489030 CST9LP1Q5W188 147 aa8.33□□□□□ -1.08
USP11-210ENST00000489030 IGFL4Q6B9Z1 124 aa8.33□□□□□ -1.08
USP11-210ENST00000489030 EXOC3-AS1Q8N2X6 119 aa8.33□□□□□ -1.08
USP11-210ENST00000489030 FAM24BQ8N5W8 94 aa8.33□□□□□ -1.08
USP11-210ENST00000489030 RNF182Q8N6D2 247 aa8.33□□□□□ -1.08
USP11-210ENST00000489030 ZNF738Q8NE65 137 aa8.33□□□□□ -1.08
USP11-210ENST00000489030 C11orf45Q8TAV5 145 aa8.33□□□□□ -1.08
USP11-210ENST00000489030 CMTM2Q8TAZ6 248 aa8.33□□□□□ -1.08
USP11-210ENST00000489030 GNG13Q9P2W3 67 aa8.33□□□□□ -1.08
USP11-210ENST00000489030 DNAH17Q9UFH2 4485 aa8.32□□□□□ -1.08
USP11-210ENST00000489030 RGS13O14921 159 aa8.32□□□□□ -1.08
USP11-210ENST00000489030 SLC25A5P05141 298 aaKnown RBP8.32□□□□□ -1.08
USP11-210ENST00000489030 HLA-DMBP28068 263 aa8.32□□□□□ -1.08
USP11-210ENST00000489030 EBLN2Q6P2I7 272 aa8.32□□□□□ -1.08
USP11-210ENST00000489030 OR11H2Q8NH07 326 aa8.32□□□□□ -1.08
USP11-210ENST00000489030 RARRES2Q99969 163 aa8.32□□□□□ -1.08
USP11-210ENST00000489030 YTHDF2Q9Y5A9 579 aaKnown RBP8.32□□□□□ -1.08
USP11-210ENST00000489030 AGRNO00468 2067 aa8.32□□□□□ -1.08
USP11-210ENST00000489030 RBFOX3A6NFN3 312 aa8.31□□□□□ -1.08
USP11-210ENST00000489030 ZNF705FA8MVS1 300 aaPredicted RBP8.31□□□□□ -1.08
USP11-210ENST00000489030 F6UZH7 168 aa8.31□□□□□ -1.08
USP11-210ENST00000489030 C5orf17Q8NAS9 161 aa8.31□□□□□ -1.08
USP11-210ENST00000489030 PCNPQ8WW12 178 aaKnown RBP8.31□□□□□ -1.08
USP11-210ENST00000489030 RPUSD4Q96CM3 377 aaKnown RBP8.31□□□□□ -1.08
USP11-210ENST00000489030 C20orf173Q96LM9 149 aa8.31□□□□□ -1.08
USP11-210ENST00000489030 TCEAL7Q9BRU2 100 aa8.31□□□□□ -1.08
USP11-210ENST00000489030 CSTL1Q9H114 145 aa8.31□□□□□ -1.08
USP11-210ENST00000489030 VAX2Q9UIW0 290 aa8.31□□□□□ -1.08
USP11-210ENST00000489030 EPDR1Q9UM22 224 aa8.31□□□□□ -1.08
USP11-210ENST00000489030 SERTM2A0A1B0GWG4 89 aa8.3□□□□□ -1.08
USP11-210ENST00000489030 IGLL5B9A064 214 aa8.3□□□□□ -1.08
USP11-210ENST00000489030 DIRC3C9JPN6 131 aa8.3□□□□□ -1.08
USP11-210ENST00000489030 C11orf94C9JXX5 98 aa8.3□□□□□ -1.08
USP11-210ENST00000489030 K7EQM0 130 aa8.3□□□□□ -1.08
USP11-210ENST00000489030 M0R3E3 92 aa8.3□□□□□ -1.08
USP11-210ENST00000489030 DUSP14O95147 198 aaKnown RBP8.3□□□□□ -1.08
USP11-210ENST00000489030 FOXI2Q6ZQN5 318 aa8.3□□□□□ -1.08
USP11-210ENST00000489030 OR10J6PQ8NGY7 276 aa8.3□□□□□ -1.08
USP11-210ENST00000489030 C2CD4CQ8TF44 421 aa8.3□□□□□ -1.08
USP11-210ENST00000489030 FAM210AQ96ND0 272 aa8.3□□□□□ -1.08
USP11-210ENST00000489030 EIF5A2Q9GZV4 153 aaKnown RBP8.3□□□□□ -1.08
USP11-210ENST00000489030 C11orf68Q9H3H3 251 aaKnown RBP8.3□□□□□ -1.08
USP11-210ENST00000489030 SAV1Q9H4B6 383 aaPredicted RBP8.3□□□□□ -1.08
USP11-210ENST00000489030 A0A0J9YX75 114 aa8.29□□□□□ -1.08
USP11-210ENST00000489030 RBAKDNA6NC62 111 aa8.29□□□□□ -1.08
USP11-210ENST00000489030 GGTLC3B5MD39 225 aa8.29□□□□□ -1.08
USP11-210ENST00000489030 GIG44P09565 113 aaPredicted RBP8.29□□□□□ -1.08
USP11-210ENST00000489030 BCL2P10415 239 aa8.29□□□□□ -1.08
USP11-210ENST00000489030 MEF2BQ02080 365 aaPredicted RBP8.29□□□□□ -1.08
USP11-210ENST00000489030 STHQ8IWL8 128 aa8.29□□□□□ -1.08
USP11-210ENST00000489030 CCDC28AQ8IWP9 274 aa8.29□□□□□ -1.08
USP11-210ENST00000489030 OR8A1Q8NGG7 326 aa8.29□□□□□ -1.08
USP11-210ENST00000489030 HIST1H2BAQ96A08 127 aa8.29□□□□□ -1.08
USP11-210ENST00000489030 LINC00477Q96M19 166 aa8.29□□□□□ -1.08
USP11-210ENST00000489030 LOC102723971A0A1B0GUV8 181 aa8.28□□□□□ -1.08
USP11-210ENST00000489030 FBLL1A6NHQ2 334 aaKnown RBP8.28□□□□□ -1.08
USP11-210ENST00000489030 RTL8CO15255 209 aa8.28□□□□□ -1.08
USP11-210ENST00000489030 PDE6DO43924 150 aa8.28□□□□□ -1.08
USP11-210ENST00000489030 NDUFS6O75380 124 aaKnown RBP8.28□□□□□ -1.08
USP11-210ENST00000489030 TCRAP04437 139 aa8.28□□□□□ -1.08
USP11-210ENST00000489030 RBMY1A1P0DJD3 496 aaKnown RBP8.28□□□□□ -1.08
USP11-210ENST00000489030 RBMY1CP0DJD4 496 aa8.28□□□□□ -1.08
USP11-210ENST00000489030 HLA-DRB4P13762 266 aa8.28□□□□□ -1.08
USP11-210ENST00000489030 ATP5G3P48201 142 aa8.28□□□□□ -1.08
USP11-210ENST00000489030 RBMY1FQ15415 496 aaKnown RBP8.28□□□□□ -1.08
USP11-210ENST00000489030 ZNF506Q5JVG8 444 aa8.28□□□□□ -1.08
USP11-210ENST00000489030 ACTL10Q5JWF8 245 aa8.28□□□□□ -1.08
USP11-210ENST00000489030 Q8NAQ8 132 aa8.28□□□□□ -1.08
USP11-210ENST00000489030 ATG101Q9BSB4 218 aa8.28□□□□□ -1.08
USP11-210ENST00000489030 SMDT1Q9H4I9 107 aa8.28□□□□□ -1.08
USP11-210ENST00000489030 PPP1R14DQ9NXH3 145 aa8.28□□□□□ -1.08
USP11-210ENST00000489030 RPH3ALQ9UNE2 315 aa8.28□□□□□ -1.08
USP11-210ENST00000489030 HLA-DRB4X5D2U9 266 aa8.28□□□□□ -1.08
USP11-210ENST00000489030 KNCNA6PVL3 124 aa8.27□□□□□ -1.09
USP11-210ENST00000489030 PRAC2D3DTV9 90 aa8.27□□□□□ -1.09
USP11-210ENST00000489030 F6UB75 175 aa8.27□□□□□ -1.09
USP11-210ENST00000489030 H3BMM0 161 aa8.27□□□□□ -1.09
USP11-210ENST00000489030 CA1P00915 261 aaPredicted RBP8.27□□□□□ -1.09
USP11-210ENST00000489030 S100A9P06702 114 aaKnown RBP8.27□□□□□ -1.09
USP11-210ENST00000489030 HIST1H1AQ02539 215 aaPredicted RBP8.27□□□□□ -1.09
USP11-210ENST00000489030 PEA15Q15121 130 aa8.27□□□□□ -1.09
USP11-210ENST00000489030 TOR2AQ5JU69 321 aa8.27□□□□□ -1.09
USP11-210ENST00000489030 TMEM78Q5T7P6 136 aa8.27□□□□□ -1.09
USP11-210ENST00000489030 GDF5OSQ5U4N7 250 aa8.27□□□□□ -1.09
USP11-210ENST00000489030 C9orf47Q6ZRZ4 202 aa8.27□□□□□ -1.09
USP11-210ENST00000489030 GOLT1AQ6ZVE7 132 aa8.27□□□□□ -1.09
USP11-210ENST00000489030 CYB561D1Q8N8Q1 229 aa8.27□□□□□ -1.09
USP11-210ENST00000489030 OR4B1Q8NGF8 309 aa8.27□□□□□ -1.09
USP11-210ENST00000489030 CLUHP3Q96NS8 147 aa8.27□□□□□ -1.09
USP11-210ENST00000489030 IGHV4-28A0A0C4DH34 117 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms