RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 PSMF1Q92530 271 aa0.95□□□□□ -2.26
RFC4-213ENST00000489028 OVOS2A0A0G2JMS6 1433 aa0.95□□□□□ -2.26
RFC4-213ENST00000489028 LAMB2P55268 1798 aa0.95□□□□□ -2.26
RFC4-213ENST00000489028 DLC1Q96QB1 1528 aa0.94□□□□□ -2.26
RFC4-213ENST00000489028 TECTAO75443 2155 aa0.94□□□□□ -2.26
RFC4-213ENST00000489028 EXPH5Q8NEV8 1989 aa0.94□□□□□ -2.26
RFC4-213ENST00000489028 N4BP2Q86UW6 1770 aaPredicted RBP0.94□□□□□ -2.26
RFC4-213ENST00000489028 CEP192Q8TEP8 1941 aa0.94□□□□□ -2.26
RFC4-213ENST00000489028 M0QZK8 103 aa0.94□□□□□ -2.26
RFC4-213ENST00000489028 FOXA3P55318 350 aaPredicted RBP0.94□□□□□ -2.26
RFC4-213ENST00000489028 PSPHP78330 225 aa0.94□□□□□ -2.26
RFC4-213ENST00000489028 MIR22HGQ0VDD5 57 aa0.94□□□□□ -2.26
RFC4-213ENST00000489028 CASC2Q6XLA1 102 aa0.94□□□□□ -2.26
RFC4-213ENST00000489028 LINC00269Q8N2A0 174 aa0.94□□□□□ -2.26
RFC4-213ENST00000489028 PLPP5Q8NEB5 264 aa0.94□□□□□ -2.26
RFC4-213ENST00000489028 OR51A4Q8NGJ6 313 aa0.94□□□□□ -2.26
RFC4-213ENST00000489028 MAGOHBQ96A72 148 aaKnown RBP0.94□□□□□ -2.26
RFC4-213ENST00000489028 NIT2Q9NQR4 276 aa0.94□□□□□ -2.26
RFC4-213ENST00000489028 JPT1Q9UK76 154 aa0.94□□□□□ -2.26
RFC4-213ENST00000489028 CACNA1BQ00975 2339 aa0.94□□□□□ -2.26
RFC4-213ENST00000489028 POLEQ07864 2286 aa0.94□□□□□ -2.26
RFC4-213ENST00000489028 ARAP1Q96P48 1450 aa0.93□□□□□ -2.26
RFC4-213ENST00000489028 CECR2Q9BXF3 1484 aa0.93□□□□□ -2.26
RFC4-213ENST00000489028 NUP210Q8TEM1 1887 aaPredicted RBP0.93□□□□□ -2.26
RFC4-213ENST00000489028 C3orf85A0A1B0GTC6 90 aa0.93□□□□□ -2.26
RFC4-213ENST00000489028 TMEM189A5PLL7 270 aa0.93□□□□□ -2.26
RFC4-213ENST00000489028 UQCRQO14949 82 aa0.93□□□□□ -2.26
RFC4-213ENST00000489028 IGHV3-33P01772 117 aa0.93□□□□□ -2.26
RFC4-213ENST00000489028 SCTP09683 121 aa0.93□□□□□ -2.26
RFC4-213ENST00000489028 CMPK1P30085 196 aa0.93□□□□□ -2.26
RFC4-213ENST00000489028 ETV6P41212 452 aa0.93□□□□□ -2.26
RFC4-213ENST00000489028 DEFB115Q30KQ5 88 aa0.93□□□□□ -2.26
RFC4-213ENST00000489028 SPRNQ5BIV9 151 aa0.93□□□□□ -2.26
RFC4-213ENST00000489028 TCTE3Q8IZS6 198 aa0.93□□□□□ -2.26
RFC4-213ENST00000489028 CIB3Q96Q77 187 aaPredicted RBP0.93□□□□□ -2.26
RFC4-213ENST00000489028 CALML5Q9NZT1 146 aa0.93□□□□□ -2.26
RFC4-213ENST00000489028 MED23Q9ULK4 1368 aa0.93□□□□□ -2.26
RFC4-213ENST00000489028 HEATR1Q9H583 2144 aaKnown RBP0.92□□□□□ -2.26
RFC4-213ENST00000489028 KIAA1549Q9HCM3 1950 aa0.92□□□□□ -2.26
RFC4-213ENST00000489028 MYLKQ15746 1914 aa0.92□□□□□ -2.26
RFC4-213ENST00000489028 C9JAW5 83 aa0.92□□□□□ -2.26
RFC4-213ENST00000489028 JMJD7-PLA2G4BH0Y9G9 81 aa0.92□□□□□ -2.26
RFC4-213ENST00000489028 KLF7O75840 302 aaPredicted RBP0.92□□□□□ -2.26
RFC4-213ENST00000489028 TNFSF15O95150 251 aa0.92□□□□□ -2.26
RFC4-213ENST00000489028 PPYP01298 95 aa0.92□□□□□ -2.26
RFC4-213ENST00000489028 HBDP02042 147 aa0.92□□□□□ -2.26
RFC4-213ENST00000489028 PAEPP09466 180 aa0.92□□□□□ -2.26
RFC4-213ENST00000489028 SDC4P31431 198 aa0.92□□□□□ -2.26
RFC4-213ENST00000489028 DNAJB13P59910 316 aa0.92□□□□□ -2.26
RFC4-213ENST00000489028 BLCAPP62952 87 aa0.92□□□□□ -2.26
RFC4-213ENST00000489028 CCSMST1Q4G0I0 132 aa0.92□□□□□ -2.26
RFC4-213ENST00000489028 LINC00299Q6ZSB3 139 aa0.92□□□□□ -2.26
RFC4-213ENST00000489028 LZICQ8WZA0 190 aa0.92□□□□□ -2.26
RFC4-213ENST00000489028 AP1S3Q96PC3 154 aa0.92□□□□□ -2.26
RFC4-213ENST00000489028 WFDC10AQ9H1F0 79 aa0.92□□□□□ -2.26
RFC4-213ENST00000489028 FKBP11Q9NYL4 201 aa0.92□□□□□ -2.26
RFC4-213ENST00000489028 HIGD1AQ9Y241 93 aa0.92□□□□□ -2.26
RFC4-213ENST00000489028 MPC1Q9Y5U8 109 aa0.92□□□□□ -2.26
RFC4-213ENST00000489028 MGAMO43451 1857 aa0.92□□□□□ -2.26
RFC4-213ENST00000489028 TNRC6BQ9UPQ9 1833 aaKnown RBP0.92□□□□□ -2.26
RFC4-213ENST00000489028 DSPPQ9NZW4 1301 aa0.91□□□□□ -2.26
RFC4-213ENST00000489028 FAM135BQ49AJ0 1406 aa0.91□□□□□ -2.26
RFC4-213ENST00000489028 UNC13CQ8NB66 2214 aa0.91□□□□□ -2.26
RFC4-213ENST00000489028 PNMA8CA0A1B0GUJ8 204 aa0.91□□□□□ -2.26
RFC4-213ENST00000489028 LOC105371267A0A1B0GV96 52 aa0.91□□□□□ -2.26
RFC4-213ENST00000489028 BBIP1A8MTZ0 92 aa0.91□□□□□ -2.26
RFC4-213ENST00000489028 SULT1C4O75897 302 aa0.91□□□□□ -2.26
RFC4-213ENST00000489028 OR2H2O95918 312 aa0.91□□□□□ -2.26
RFC4-213ENST00000489028 SLC25A4P12235 298 aa0.91□□□□□ -2.26
RFC4-213ENST00000489028 CCL4P13236 92 aa0.91□□□□□ -2.26
RFC4-213ENST00000489028 HIST1H1BP16401 226 aaKnown RBP0.91□□□□□ -2.26
RFC4-213ENST00000489028 NEDD8Q15843 81 aa0.91□□□□□ -2.26
RFC4-213ENST00000489028 SPATA45Q537H7 98 aa0.91□□□□□ -2.26
RFC4-213ENST00000489028 HSD17B12Q53GQ0 312 aa0.91□□□□□ -2.26
RFC4-213ENST00000489028 AMELYQ99218 206 aa0.91□□□□□ -2.26
RFC4-213ENST00000489028 NABP2Q9BQ15 211 aa0.91□□□□□ -2.26
RFC4-213ENST00000489028 C22orf24Q9Y442 160 aa0.91□□□□□ -2.26
RFC4-213ENST00000489028 FHAD1B1AJZ9 1412 aa0.9□□□□□ -2.26
RFC4-213ENST00000489028 LOC107984156A0A0G2JMH3 177 aa0.9□□□□□ -2.27
RFC4-213ENST00000489028 A0A0J9YY99 117 aa0.9□□□□□ -2.27
RFC4-213ENST00000489028 IFITM5A6NNB3 132 aa0.9□□□□□ -2.27
RFC4-213ENST00000489028 SMIM24O75264 130 aa0.9□□□□□ -2.27
RFC4-213ENST00000489028 TCRAP04437 139 aa0.9□□□□□ -2.27
RFC4-213ENST00000489028 CKS2P33552 79 aa0.9□□□□□ -2.27
RFC4-213ENST00000489028 ASB16-AS1Q495Z4 193 aa0.9□□□□□ -2.27
RFC4-213ENST00000489028 MORN2Q502X0 79 aa0.9□□□□□ -2.27
RFC4-213ENST00000489028 TMEM244Q5VVB8 128 aa0.9□□□□□ -2.27
RFC4-213ENST00000489028 Q5XG85 94 aa0.9□□□□□ -2.27
RFC4-213ENST00000489028 IZUMO2Q6UXV1 221 aa0.9□□□□□ -2.27
RFC4-213ENST00000489028 ZCCHC23Q6ZST2 131 aa0.9□□□□□ -2.27
RFC4-213ENST00000489028 ARL17AQ8IVW1 177 aa0.9□□□□□ -2.27
RFC4-213ENST00000489028 C5orf17Q8NAS9 161 aa0.9□□□□□ -2.27
RFC4-213ENST00000489028 OR4S1Q8NGB4 309 aa0.9□□□□□ -2.27
RFC4-213ENST00000489028 MAFIPQ8WZ33 124 aa0.9□□□□□ -2.27
RFC4-213ENST00000489028 SMIM7Q9BQ49 75 aa0.9□□□□□ -2.27
RFC4-213ENST00000489028 GSKIPQ9P0R6 139 aa0.9□□□□□ -2.27
RFC4-213ENST00000489028 ARHGEF10O15013 1369 aa0.9□□□□□ -2.27
RFC4-213ENST00000489028 ANKRD31Q8N7Z5 1873 aa0.9□□□□□ -2.27
RFC4-213ENST00000489028 TNRC6AQ8NDV7 1962 aaKnown RBP0.9□□□□□ -2.27
RFC4-213ENST00000489028 COL24A1Q17RW2 1714 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms