RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 MCM3APO60318 1980 aa1.91□□□□□ -2.1
PRPF4-203ENST00000488937 IGKV1D-42A0A075B6H8 117 aa1.91□□□□□ -2.1
PRPF4-203ENST00000488937 IGLV2-18A0A075B6J9 118 aa1.91□□□□□ -2.1
PRPF4-203ENST00000488937 TRAV30A0A087WSZ9 112 aa1.91□□□□□ -2.1
PRPF4-203ENST00000488937 IGKV2D-26A0A0A0MRZ7 120 aa1.91□□□□□ -2.1
PRPF4-203ENST00000488937 MUC21A0A0G2JKD1 596 aa1.91□□□□□ -2.1
PRPF4-203ENST00000488937 MUC21A0A140T8X8 626 aa1.91□□□□□ -2.1
PRPF4-203ENST00000488937 PVALEFA0A1B0GWK0 134 aa1.91□□□□□ -2.1
PRPF4-203ENST00000488937 BBIP1A8MTZ0 92 aa1.91□□□□□ -2.1
PRPF4-203ENST00000488937 C17orf112F2Z3M2 114 aa1.91□□□□□ -2.1
PRPF4-203ENST00000488937 M0R2P5 195 aa1.91□□□□□ -2.1
PRPF4-203ENST00000488937 IFNA17P01571 189 aa1.91□□□□□ -2.1
PRPF4-203ENST00000488937 MIFP14174 115 aa1.91□□□□□ -2.1
PRPF4-203ENST00000488937 HIST1H1DP16402 221 aaKnown RBP1.91□□□□□ -2.1
PRPF4-203ENST00000488937 GNG2P59768 71 aa1.91□□□□□ -2.1
PRPF4-203ENST00000488937 TMEM258P61165 79 aa1.91□□□□□ -2.1
PRPF4-203ENST00000488937 ZNF90Q03938 601 aa1.91□□□□□ -2.1
PRPF4-203ENST00000488937 RELAQ04206 551 aa1.91□□□□□ -2.1
PRPF4-203ENST00000488937 ZNF345Q14585 488 aa1.91□□□□□ -2.1
PRPF4-203ENST00000488937 SS18Q15532 418 aa1.91□□□□□ -2.1
PRPF4-203ENST00000488937 ZNF791Q3KP31 576 aaPredicted RBP1.91□□□□□ -2.1
PRPF4-203ENST00000488937 OR5AS1Q8N127 324 aa1.91□□□□□ -2.1
PRPF4-203ENST00000488937 C9orf163Q8N9P6 203 aa1.91□□□□□ -2.1
PRPF4-203ENST00000488937 HYLS1Q96M11 299 aa1.91□□□□□ -2.1
PRPF4-203ENST00000488937 CIB3Q96Q77 187 aaPredicted RBP1.91□□□□□ -2.1
PRPF4-203ENST00000488937 Q9BRP9 147 aa1.91□□□□□ -2.1
PRPF4-203ENST00000488937 LY96Q9Y6Y9 160 aa1.91□□□□□ -2.1
PRPF4-203ENST00000488937 ZSWIM8A7E2V4 1837 aa1.91□□□□□ -2.1
PRPF4-203ENST00000488937 COL16A1Q07092 1604 aaPredicted RBP1.91□□□□□ -2.1
PRPF4-203ENST00000488937 GPR179Q6PRD1 2367 aa1.91□□□□□ -2.1
PRPF4-203ENST00000488937 COL4A5P29400 1685 aa1.9□□□□□ -2.1
PRPF4-203ENST00000488937 ABCC10Q5T3U5 1492 aa1.9□□□□□ -2.11
PRPF4-203ENST00000488937 PHIPQ8WWQ0 1821 aa1.9□□□□□ -2.11
PRPF4-203ENST00000488937 IGLV4-60A0A075B6I1 120 aa1.9□□□□□ -2.11
PRPF4-203ENST00000488937 A0A087WSZ3 146 aa1.9□□□□□ -2.11
PRPF4-203ENST00000488937 LOC107986453A0A1B0GWG9 222 aa1.9□□□□□ -2.11
PRPF4-203ENST00000488937 IBA57-AS1B1ANH7 110 aa1.9□□□□□ -2.11
PRPF4-203ENST00000488937 M0R129 80 aa1.9□□□□□ -2.11
PRPF4-203ENST00000488937 LYRM1O43325 122 aa1.9□□□□□ -2.11
PRPF4-203ENST00000488937 PEBP1P30086 187 aaKnown RBP1.9□□□□□ -2.11
PRPF4-203ENST00000488937 LINC01545Q5VT33 79 aa1.9□□□□□ -2.11
PRPF4-203ENST00000488937 C8orf59Q8N0T1 100 aaPredicted RBP1.9□□□□□ -2.11
PRPF4-203ENST00000488937 CLEC2BQ92478 149 aa1.9□□□□□ -2.11
PRPF4-203ENST00000488937 SLC50A1Q9BRV3 221 aa1.9□□□□□ -2.11
PRPF4-203ENST00000488937 RERGLQ9H628 205 aa1.9□□□□□ -2.11
PRPF4-203ENST00000488937 C14orf132Q9NPU4 83 aa1.9□□□□□ -2.11
PRPF4-203ENST00000488937 SAR1AQ9NR31 198 aa1.9□□□□□ -2.11
PRPF4-203ENST00000488937 RPRMQ9NS64 109 aa1.9□□□□□ -2.11
PRPF4-203ENST00000488937 PRO2289Q9P1D8 64 aa1.9□□□□□ -2.11
PRPF4-203ENST00000488937 TPRKBQ9Y3C4 175 aa1.9□□□□□ -2.11
PRPF4-203ENST00000488937 LHFPL6Q9Y693 200 aa1.9□□□□□ -2.11
PRPF4-203ENST00000488937 PRRC2AP48634 2157 aaKnown RBP1.9□□□□□ -2.11
PRPF4-203ENST00000488937 MAPKBP1O60336 1514 aa1.9□□□□□ -2.11
PRPF4-203ENST00000488937 SLIT2O94813 1529 aa1.9□□□□□ -2.11
PRPF4-203ENST00000488937 PLXNA2O75051 1894 aa1.9□□□□□ -2.11
PRPF4-203ENST00000488937 MYO9BQ13459 2157 aa1.89□□□□□ -2.11
PRPF4-203ENST00000488937 KIAA1549LQ6ZVL6 1849 aa1.89□□□□□ -2.11
PRPF4-203ENST00000488937 CECR2Q9BXF3 1484 aa1.89□□□□□ -2.11
PRPF4-203ENST00000488937 TRAV3A0A0B4J244 114 aa1.89□□□□□ -2.11
PRPF4-203ENST00000488937 hDV103S1A0JD37 113 aa1.89□□□□□ -2.11
PRPF4-203ENST00000488937 TMEM218A2RU14 115 aa1.89□□□□□ -2.11
PRPF4-203ENST00000488937 FNDC10F2Z333 226 aa1.89□□□□□ -2.11
PRPF4-203ENST00000488937 G3V3Q6 166 aa1.89□□□□□ -2.11
PRPF4-203ENST00000488937 YPEL1O60688 119 aa1.89□□□□□ -2.11
PRPF4-203ENST00000488937 TRACP01848 142 aa1.89□□□□□ -2.11
PRPF4-203ENST00000488937 BAALC-AS2P0C853 105 aa1.89□□□□□ -2.11
PRPF4-203ENST00000488937 PKIAP61925 76 aa1.89□□□□□ -2.11
PRPF4-203ENST00000488937 CDK6Q00534 326 aa1.89□□□□□ -2.11
PRPF4-203ENST00000488937 CLLU1Q5K131 121 aa1.89□□□□□ -2.11
PRPF4-203ENST00000488937 SPANXN5Q5MJ07 72 aa1.89□□□□□ -2.11
PRPF4-203ENST00000488937 C1orf134Q5TEV5 83 aa1.89□□□□□ -2.11
PRPF4-203ENST00000488937 Q6ZUT4 128 aa1.89□□□□□ -2.11
PRPF4-203ENST00000488937 SNX29P2Q8IUI4 249 aa1.89□□□□□ -2.11
PRPF4-203ENST00000488937 LINC00471Q8N535 108 aa1.89□□□□□ -2.11
PRPF4-203ENST00000488937 OR8B3Q8NGG8 313 aa1.89□□□□□ -2.11
PRPF4-203ENST00000488937 OTOSQ8NHW6 89 aa1.89□□□□□ -2.11
PRPF4-203ENST00000488937 MRPL57Q9BQC6 102 aaKnown RBP1.89□□□□□ -2.11
PRPF4-203ENST00000488937 AGPAT4-IT1Q9H0P7 198 aa1.89□□□□□ -2.11
PRPF4-203ENST00000488937 HEATR5BQ9P2D3 2071 aa1.89□□□□□ -2.11
PRPF4-203ENST00000488937 LTBP2Q14767 1821 aa1.89□□□□□ -2.11
PRPF4-203ENST00000488937 NRKQ7Z2Y5 1582 aa1.89□□□□□ -2.11
PRPF4-203ENST00000488937 KIAA1551Q9HCM1 1747 aa1.88□□□□□ -2.11
PRPF4-203ENST00000488937 CFTRP13569 1480 aa1.88□□□□□ -2.11
PRPF4-203ENST00000488937 RAPGEF2Q9Y4G8 1499 aa1.88□□□□□ -2.11
PRPF4-203ENST00000488937 IGLV10-54A0A075B6I4 117 aa1.88□□□□□ -2.11
PRPF4-203ENST00000488937 IGKV2D-24A0A075B6R9 120 aa1.88□□□□□ -2.11
PRPF4-203ENST00000488937 TMSB15BA0A087X1C1 80 aa1.88□□□□□ -2.11
PRPF4-203ENST00000488937 PNMA8CA0A1B0GUJ8 204 aa1.88□□□□□ -2.11
PRPF4-203ENST00000488937 LRCOL1A6NCL2 159 aa1.88□□□□□ -2.11
PRPF4-203ENST00000488937 E7EQL1 145 aa1.88□□□□□ -2.11
PRPF4-203ENST00000488937 E7EUB6 86 aa1.88□□□□□ -2.11
PRPF4-203ENST00000488937 PMP2P02689 132 aa1.88□□□□□ -2.11
PRPF4-203ENST00000488937 P0C880 135 aa1.88□□□□□ -2.11
PRPF4-203ENST00000488937 DSCR4P56555 118 aaPredicted RBP1.88□□□□□ -2.11
PRPF4-203ENST00000488937 PCBD1P61457 104 aa1.88□□□□□ -2.11
PRPF4-203ENST00000488937 IGFBP7Q16270 282 aa1.88□□□□□ -2.11
PRPF4-203ENST00000488937 LY6EQ16553 131 aa1.88□□□□□ -2.11
PRPF4-203ENST00000488937 KRTAP13-2Q52LG2 175 aa1.88□□□□□ -2.11
PRPF4-203ENST00000488937 ATP11AUNQ6ZP68 121 aa1.88□□□□□ -2.11
PRPF4-203ENST00000488937 LINC00269Q8N2A0 174 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms