RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 NKX2-5P52952 324 aaPredicted RBP9.79□□□□□ -0.84
SPTLC1-207ENST00000488921 C9orf62Q8N4C0 152 aa9.79□□□□□ -0.84
SPTLC1-207ENST00000488921 HSD17B11Q8NBQ5 300 aa9.79□□□□□ -0.84
SPTLC1-207ENST00000488921 AAMDCQ9H7C9 122 aa9.79□□□□□ -0.84
SPTLC1-207ENST00000488921 TIMM9Q9Y5J7 89 aa9.79□□□□□ -0.84
SPTLC1-207ENST00000488921 TIMM8BQ9Y5J9 83 aaPredicted RBP9.79□□□□□ -0.84
SPTLC1-207ENST00000488921 PLAC8L1A1L4L8 177 aa9.78□□□□□ -0.84
SPTLC1-207ENST00000488921 PRAC2D3DTV9 90 aa9.78□□□□□ -0.84
SPTLC1-207ENST00000488921 NPIPB6E9PJ23 425 aa9.78□□□□□ -0.84
SPTLC1-207ENST00000488921 DEFB130BP0DP73 79 aa9.78□□□□□ -0.84
SPTLC1-207ENST00000488921 DEFB130AP0DP74 79 aa9.78□□□□□ -0.84
SPTLC1-207ENST00000488921 PRB4P10163 310 aaPredicted RBP9.78□□□□□ -0.84
SPTLC1-207ENST00000488921 TPT1P13693 172 aaKnown RBP9.78□□□□□ -0.84
SPTLC1-207ENST00000488921 AZU1P20160 251 aa9.78□□□□□ -0.84
SPTLC1-207ENST00000488921 GFI1BQ5VTD9 330 aa9.78□□□□□ -0.84
SPTLC1-207ENST00000488921 TMEM88Q6PEY1 159 aa9.78□□□□□ -0.84
SPTLC1-207ENST00000488921 MRPL32Q9BYC8 188 aaKnown RBP9.78□□□□□ -0.84
SPTLC1-207ENST00000488921 HECTD4Q9Y4D8 3996 aa9.77□□□□□ -0.85
SPTLC1-207ENST00000488921 PRM2P04554 102 aa9.77□□□□□ -0.85
SPTLC1-207ENST00000488921 ATP5G1P05496 136 aa9.77□□□□□ -0.85
SPTLC1-207ENST00000488921 ATP5G3P48201 142 aa9.77□□□□□ -0.85
SPTLC1-207ENST00000488921 RNF212Q495C1 297 aa9.77□□□□□ -0.85
SPTLC1-207ENST00000488921 EIF5AL1Q6IS14 154 aaKnown RBP9.77□□□□□ -0.85
SPTLC1-207ENST00000488921 SLC51BQ86UW2 128 aa9.77□□□□□ -0.85
SPTLC1-207ENST00000488921 CCDC28AQ8IWP9 274 aa9.77□□□□□ -0.85
SPTLC1-207ENST00000488921 RNASE8Q8TDE3 154 aaKnown RBP9.77□□□□□ -0.85
SPTLC1-207ENST00000488921 CYTL1Q9NRR1 136 aa9.77□□□□□ -0.85
SPTLC1-207ENST00000488921 PYYP10082 97 aa9.76□□□□□ -0.85
SPTLC1-207ENST00000488921 ATP6V0CP27449 155 aa9.76□□□□□ -0.85
SPTLC1-207ENST00000488921 SERF2P84101 59 aa9.76□□□□□ -0.85
SPTLC1-207ENST00000488921 GCSAMLQ5JQS6 135 aa9.76□□□□□ -0.85
SPTLC1-207ENST00000488921 LINC00336Q6ZUF6 198 aa9.76□□□□□ -0.85
SPTLC1-207ENST00000488921 BLNKQ8WV28 456 aa9.76□□□□□ -0.85
SPTLC1-207ENST00000488921 PSMG3Q9BT73 122 aaPredicted RBP9.76□□□□□ -0.85
SPTLC1-207ENST00000488921 SLC25A2Q9BXI2 301 aa9.76□□□□□ -0.85
SPTLC1-207ENST00000488921 CBY3A6NI87 242 aa9.75□□□□□ -0.85
SPTLC1-207ENST00000488921 M0R3E3 92 aa9.75□□□□□ -0.85
SPTLC1-207ENST00000488921 MBP02144 154 aa9.75□□□□□ -0.85
SPTLC1-207ENST00000488921 SLC25A5P05141 298 aaKnown RBP9.75□□□□□ -0.85
SPTLC1-207ENST00000488921 CT45A10P0DMU9 189 aa9.75□□□□□ -0.85
SPTLC1-207ENST00000488921 KIR3DS1Q14943 382 aa9.75□□□□□ -0.85
SPTLC1-207ENST00000488921 ACOT6Q3I5F7 207 aaPredicted RBP9.75□□□□□ -0.85
SPTLC1-207ENST00000488921 FFAR4Q5NUL3 377 aa9.75□□□□□ -0.85
SPTLC1-207ENST00000488921 OR2G3Q8NGZ4 309 aa9.75□□□□□ -0.85
SPTLC1-207ENST00000488921 PYGO2Q9BRQ0 406 aa9.75□□□□□ -0.85
SPTLC1-207ENST00000488921 NACAE9PAV3 2078 aa9.75□□□□□ -0.85
SPTLC1-207ENST00000488921 TRAV12-3A0A0B4J271 114 aa9.74□□□□□ -0.85
SPTLC1-207ENST00000488921 SNURFLB1AK76 121 aa9.74□□□□□ -0.85
SPTLC1-207ENST00000488921 F5H768 121 aa9.74□□□□□ -0.85
SPTLC1-207ENST00000488921 J3KRW8 73 aa9.74□□□□□ -0.85
SPTLC1-207ENST00000488921 NDUFB4O95168 129 aa9.74□□□□□ -0.85
SPTLC1-207ENST00000488921 FAM3BP58499 235 aaPredicted RBP9.74□□□□□ -0.85
SPTLC1-207ENST00000488921 LGALS9BQ3B8N2 356 aa9.74□□□□□ -0.85
SPTLC1-207ENST00000488921 MIR17HGQ75NE6 70 aa9.74□□□□□ -0.85
SPTLC1-207ENST00000488921 FAM167A-AS1Q96KT0 104 aa9.74□□□□□ -0.85
SPTLC1-207ENST00000488921 LINC00477Q96M19 166 aa9.74□□□□□ -0.85
SPTLC1-207ENST00000488921 PAXXQ9BUH6 204 aa9.74□□□□□ -0.85
SPTLC1-207ENST00000488921 OR51M1Q9H341 326 aa9.74□□□□□ -0.85
SPTLC1-207ENST00000488921 NOP10Q9NPE3 64 aaKnown RBP9.74□□□□□ -0.85
SPTLC1-207ENST00000488921 FUT9Q9Y231 359 aa9.74□□□□□ -0.85
SPTLC1-207ENST00000488921 DNAH2Q9P225 4427 aa9.73□□□□□ -0.85
SPTLC1-207ENST00000488921 OR7C2O60412 319 aa9.73□□□□□ -0.85
SPTLC1-207ENST00000488921 NBEAP1P0C6P0 100 aa9.73□□□□□ -0.85
SPTLC1-207ENST00000488921 SEC11BP0C7V7 166 aa9.73□□□□□ -0.85
SPTLC1-207ENST00000488921 ICAM4Q14773 271 aa9.73□□□□□ -0.85
SPTLC1-207ENST00000488921 AKR1C8PQ5T2L2 129 aa9.73□□□□□ -0.85
SPTLC1-207ENST00000488921 TMEM78Q5T7P6 136 aa9.73□□□□□ -0.85
SPTLC1-207ENST00000488921 EXOC3-AS1Q8N2X6 119 aa9.73□□□□□ -0.85
SPTLC1-207ENST00000488921 STOML3Q8TAV4 291 aa9.73□□□□□ -0.85
SPTLC1-207ENST00000488921 ATG101Q9BSB4 218 aa9.73□□□□□ -0.85
SPTLC1-207ENST00000488921 SH3BGRL3Q9H299 93 aa9.73□□□□□ -0.85
SPTLC1-207ENST00000488921 A0A1W2PPV4 95 aa9.72□□□□□ -0.85
SPTLC1-207ENST00000488921 C7orf71A4D174 169 aa9.72□□□□□ -0.85
SPTLC1-207ENST00000488921 KLLNB2CW77 178 aa9.72□□□□□ -0.85
SPTLC1-207ENST00000488921 NMBP08949 121 aa9.72□□□□□ -0.85
SPTLC1-207ENST00000488921 M6PRP20645 277 aa9.72□□□□□ -0.85
SPTLC1-207ENST00000488921 TAS2R45P59539 299 aa9.72□□□□□ -0.85
SPTLC1-207ENST00000488921 C9orf47Q6ZRZ4 202 aa9.72□□□□□ -0.85
SPTLC1-207ENST00000488921 ZNF680Q8NEM1 530 aa9.72□□□□□ -0.85
SPTLC1-207ENST00000488921 FAT2Q9NYQ8 4349 aa9.71□□□□□ -0.85
SPTLC1-207ENST00000488921 UMAD1C9J7I0 102 aa9.71□□□□□ -0.86
SPTLC1-207ENST00000488921 M0R2N4 97 aa9.71□□□□□ -0.86
SPTLC1-207ENST00000488921 OR10J4P0C629 311 aa9.71□□□□□ -0.86
SPTLC1-207ENST00000488921 CSN1S1P47710 185 aa9.71□□□□□ -0.86
SPTLC1-207ENST00000488921 ERCC8Q13216 396 aa9.71□□□□□ -0.86
SPTLC1-207ENST00000488921 KHDC3LQ587J8 217 aa9.71□□□□□ -0.86
SPTLC1-207ENST00000488921 FAM122CQ6P4D5 195 aa9.71□□□□□ -0.86
SPTLC1-207ENST00000488921 LYPD1Q8N2G4 141 aa9.71□□□□□ -0.86
SPTLC1-207ENST00000488921 LINC00612Q8N6U2 182 aa9.71□□□□□ -0.86
SPTLC1-207ENST00000488921 OR10G4Q8NGN3 311 aa9.71□□□□□ -0.86
SPTLC1-207ENST00000488921 OR10G9Q8NGN4 311 aa9.71□□□□□ -0.86
SPTLC1-207ENST00000488921 OR10G7Q8NGN6 311 aa9.71□□□□□ -0.86
SPTLC1-207ENST00000488921 RNF141Q8WVD5 230 aa9.71□□□□□ -0.86
SPTLC1-207ENST00000488921 FXYD5Q96DB9 178 aa9.71□□□□□ -0.86
SPTLC1-207ENST00000488921 FAM19A4Q96LR4 140 aa9.71□□□□□ -0.86
SPTLC1-207ENST00000488921 AGPAT4-IT1Q9H0P7 198 aa9.71□□□□□ -0.86
SPTLC1-207ENST00000488921 IGKV2-40A0A087WW87 121 aaPredicted RBP9.7□□□□□ -0.86
SPTLC1-207ENST00000488921 NUDT3O95989 172 aa9.7□□□□□ -0.86
SPTLC1-207ENST00000488921 IGKV2D-40P01614 121 aaPredicted RBP9.7□□□□□ -0.86
SPTLC1-207ENST00000488921 GPX1P07203 203 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms