RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 TMEM14CQ9P0S9 112 aa12.68□□□□□ -0.38
HDAC6-231ENST00000488905 TRAV6A0A075B6T7 132 aa12.67□□□□□ -0.38
HDAC6-231ENST00000488905 TRGV1A0A0A0MS02 117 aa12.67□□□□□ -0.38
HDAC6-231ENST00000488905 IGSF23A1L1A6 192 aa12.67□□□□□ -0.38
HDAC6-231ENST00000488905 ZNF324O75467 553 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-231ENST00000488905 NDUFB4O95168 129 aa12.67□□□□□ -0.38
HDAC6-231ENST00000488905 TCRBP04435 133 aa12.67□□□□□ -0.38
HDAC6-231ENST00000488905 FGF7P21781 194 aa12.67□□□□□ -0.38
HDAC6-231ENST00000488905 S100A11P31949 105 aa12.67□□□□□ -0.38
HDAC6-231ENST00000488905 LINC00315P59091 139 aa12.67□□□□□ -0.38
HDAC6-231ENST00000488905 S100A10P60903 97 aa12.67□□□□□ -0.38
HDAC6-231ENST00000488905 HBG1P69891 147 aa12.67□□□□□ -0.38
HDAC6-231ENST00000488905 HBG2P69892 147 aa12.67□□□□□ -0.38
HDAC6-231ENST00000488905 CD300CQ08708 224 aa12.67□□□□□ -0.38
HDAC6-231ENST00000488905 ANXA2RQ3ZCQ2 193 aa12.67□□□□□ -0.38
HDAC6-231ENST00000488905 STX12Q86Y82 276 aa12.67□□□□□ -0.38
HDAC6-231ENST00000488905 EIF4E3Q8N5X7 224 aaKnown RBP12.67□□□□□ -0.38
HDAC6-231ENST00000488905 CHAC2Q8WUX2 184 aa12.67□□□□□ -0.38
HDAC6-231ENST00000488905 C2orf50Q96LR7 162 aa12.67□□□□□ -0.38
HDAC6-231ENST00000488905 NUDT15Q9NV35 164 aa12.67□□□□□ -0.38
HDAC6-231ENST00000488905 FUT9Q9Y231 359 aa12.67□□□□□ -0.38
HDAC6-231ENST00000488905 PRELID1Q9Y255 219 aa12.67□□□□□ -0.38
HDAC6-231ENST00000488905 PYYP10082 97 aa12.66□□□□□ -0.38
HDAC6-231ENST00000488905 HIST1H1EP10412 219 aaKnown RBP12.66□□□□□ -0.38
HDAC6-231ENST00000488905 TCL1AP56279 114 aa12.66□□□□□ -0.38
HDAC6-231ENST00000488905 TMEM252Q8N6L7 170 aa12.66□□□□□ -0.38
HDAC6-231ENST00000488905 LINC00477Q96M19 166 aa12.66□□□□□ -0.38
HDAC6-231ENST00000488905 SCRT2Q9NQ03 307 aa12.66□□□□□ -0.38
HDAC6-231ENST00000488905 TIMM9Q9Y5J7 89 aa12.66□□□□□ -0.38
HDAC6-231ENST00000488905 SPINK4O60575 86 aa12.65□□□□□ -0.38
HDAC6-231ENST00000488905 CRISP2P16562 243 aa12.65□□□□□ -0.38
HDAC6-231ENST00000488905 EXOC3-AS1Q8N2X6 119 aa12.65□□□□□ -0.38
HDAC6-231ENST00000488905 BLNKQ8WV28 456 aa12.65□□□□□ -0.38
HDAC6-231ENST00000488905 AGPAT4-IT1Q9H0P7 198 aa12.65□□□□□ -0.38
HDAC6-231ENST00000488905 MPDU1O75352 247 aa12.64□□□□□ -0.39
HDAC6-231ENST00000488905 RNASE4P34096 147 aaKnown RBP12.64□□□□□ -0.39
HDAC6-231ENST00000488905 RAB32Q13637 225 aa12.64□□□□□ -0.39
HDAC6-231ENST00000488905 GCSAMLQ5JQS6 135 aa12.64□□□□□ -0.39
HDAC6-231ENST00000488905 IBA57Q5T440 356 aaKnown RBP12.64□□□□□ -0.39
HDAC6-231ENST00000488905 Q6ZRN7 208 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-231ENST00000488905 C9orf47Q6ZRZ4 202 aa12.64□□□□□ -0.39
HDAC6-231ENST00000488905 NPCDR1Q9BY65 106 aa12.64□□□□□ -0.39
HDAC6-231ENST00000488905 AAMDCQ9H7C9 122 aa12.64□□□□□ -0.39
HDAC6-231ENST00000488905 KLF12Q9Y4X4 402 aa12.64□□□□□ -0.39
HDAC6-231ENST00000488905 HERC1Q15751 4861 aa12.63□□□□□ -0.39
HDAC6-231ENST00000488905 FAT1Q14517 4588 aa12.63□□□□□ -0.39
HDAC6-231ENST00000488905 IGKV2-40A0A087WW87 121 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-231ENST00000488905 SIVA1O15304 175 aa12.63□□□□□ -0.39
HDAC6-231ENST00000488905 IGKV2D-40P01614 121 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-231ENST00000488905 GPX1P07203 203 aa12.63□□□□□ -0.39
HDAC6-231ENST00000488905 NMBP08949 121 aa12.63□□□□□ -0.39
HDAC6-231ENST00000488905 IL15RAQ13261 267 aa12.63□□□□□ -0.39
HDAC6-231ENST00000488905 ATP6V1FQ16864 119 aa12.63□□□□□ -0.39
HDAC6-231ENST00000488905 TMEM78Q5T7P6 136 aa12.63□□□□□ -0.39
HDAC6-231ENST00000488905 PRR9Q5T870 116 aa12.63□□□□□ -0.39
HDAC6-231ENST00000488905 ST6GAL2Q96JF0 529 aa12.63□□□□□ -0.39
HDAC6-231ENST00000488905 SLC25A2Q9BXI2 301 aa12.63□□□□□ -0.39
HDAC6-231ENST00000488905 GPN1Q9HCN4 374 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-231ENST00000488905 ICOSQ9Y6W8 199 aa12.63□□□□□ -0.39
HDAC6-231ENST00000488905 ICAM4Q14773 271 aa12.62□□□□□ -0.39
HDAC6-231ENST00000488905 ZFAND2AQ8N6M9 145 aa12.62□□□□□ -0.39
HDAC6-231ENST00000488905 TP53TG3Q9ULZ0 132 aa12.62□□□□□ -0.39
HDAC6-231ENST00000488905 RGS13O14921 159 aa12.61□□□□□ -0.39
HDAC6-231ENST00000488905 PAX4O43316 350 aa12.61□□□□□ -0.39
HDAC6-231ENST00000488905 NXPH4O95158 308 aa12.61□□□□□ -0.39
HDAC6-231ENST00000488905 FAM122CQ6P4D5 195 aa12.61□□□□□ -0.39
HDAC6-231ENST00000488905 VGLL1Q99990 258 aa12.61□□□□□ -0.39
HDAC6-231ENST00000488905 ARPC5LQ9BPX5 153 aa12.61□□□□□ -0.39
HDAC6-231ENST00000488905 MRPL16Q9NX20 251 aaKnown RBP12.61□□□□□ -0.39
HDAC6-231ENST00000488905 IGHV1OR15-1A0A075B7D0 117 aa12.6□□□□□ -0.39
HDAC6-231ENST00000488905 IGHV3-53P01767 116 aa12.6□□□□□ -0.39
HDAC6-231ENST00000488905 H2AFB2P0C5Z0 115 aa12.6□□□□□ -0.39
HDAC6-231ENST00000488905 Q6ZQT7 251 aa12.6□□□□□ -0.39
HDAC6-231ENST00000488905 FAM167A-AS1Q96KT0 104 aa12.6□□□□□ -0.39
HDAC6-231ENST00000488905 PRO0255Q9UI72 69 aa12.6□□□□□ -0.39
HDAC6-231ENST00000488905 VPS13BQ7Z7G8 4022 aa12.6□□□□□ -0.39
HDAC6-231ENST00000488905 MIR17HGQ75NE6 70 aa12.59□□□□□ -0.39
HDAC6-231ENST00000488905 THAP6Q8TBB0 222 aa12.59□□□□□ -0.39
HDAC6-231ENST00000488905 ZNF492Q9P255 531 aa12.59□□□□□ -0.39
HDAC6-231ENST00000488905 CRYBA4P53673 196 aa12.58□□□□□ -0.4
HDAC6-231ENST00000488905 ERVFC1-1P60608 527 aa12.58□□□□□ -0.4
HDAC6-231ENST00000488905 ZNF415Q09FC8 603 aa12.58□□□□□ -0.4
HDAC6-231ENST00000488905 Q8TAT8 98 aa12.58□□□□□ -0.4
HDAC6-231ENST00000488905 NBEAP1P0C6P0 100 aa12.57□□□□□ -0.4
HDAC6-231ENST00000488905 NHLH2Q02577 135 aa12.57□□□□□ -0.4
HDAC6-231ENST00000488905 SLAQ13239 276 aa12.57□□□□□ -0.4
HDAC6-231ENST00000488905 OR5C1Q8NGR4 320 aa12.57□□□□□ -0.4
HDAC6-231ENST00000488905 PHYHIPLQ96FC7 376 aa12.57□□□□□ -0.4
HDAC6-231ENST00000488905 C8orf49Q96NF6 230 aa12.57□□□□□ -0.4
HDAC6-231ENST00000488905 CCDC32Q9BV29 185 aa12.57□□□□□ -0.4
HDAC6-231ENST00000488905 MRPL32Q9BYC8 188 aaKnown RBP12.57□□□□□ -0.4
HDAC6-231ENST00000488905 OR51M1Q9H341 326 aa12.57□□□□□ -0.4
HDAC6-231ENST00000488905 TRBV7-9A0A0J9YWB2 115 aa12.56□□□□□ -0.4
HDAC6-231ENST00000488905 FAM240BA0A1B0GVZ2 78 aa12.56□□□□□ -0.4
HDAC6-231ENST00000488905 EREGO14944 169 aa12.56□□□□□ -0.4
HDAC6-231ENST00000488905 OR10J4P0C629 311 aa12.56□□□□□ -0.4
HDAC6-231ENST00000488905 ZNF138P52744 262 aa12.56□□□□□ -0.4
HDAC6-231ENST00000488905 FHL2Q14192 279 aa12.56□□□□□ -0.4
HDAC6-231ENST00000488905 MRPL23Q16540 153 aaKnown RBP12.56□□□□□ -0.4
HDAC6-231ENST00000488905 FXYD5Q96DB9 178 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms