RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 RHEBQ15382 184 aa7.97□□□□□ -1.13
USP11-209ENST00000488848 ODF3L2Q3SX64 289 aa7.97□□□□□ -1.13
USP11-209ENST00000488848 CENPWQ5EE01 88 aa7.97□□□□□ -1.13
USP11-209ENST00000488848 SAPCD1Q5SSQ6 148 aa7.97□□□□□ -1.13
USP11-209ENST00000488848 FAM231DQ6ZW35 169 aa7.97□□□□□ -1.13
USP11-209ENST00000488848 TMEM183AQ8IXX5 376 aa7.97□□□□□ -1.13
USP11-209ENST00000488848 FAM24BQ8N5W8 94 aa7.97□□□□□ -1.13
USP11-209ENST00000488848 RNF182Q8N6D2 247 aa7.97□□□□□ -1.13
USP11-209ENST00000488848 OR8A1Q8NGG7 326 aa7.97□□□□□ -1.13
USP11-209ENST00000488848 TVP23CQ96ET8 276 aa7.97□□□□□ -1.13
USP11-209ENST00000488848 SAV1Q9H4B6 383 aaPredicted RBP7.97□□□□□ -1.13
USP11-209ENST00000488848 PSG8Q9UQ74 426 aa7.97□□□□□ -1.13
USP11-209ENST00000488848 IZUMO1RA6ND01 250 aa7.96□□□□□ -1.14
USP11-209ENST00000488848 ZNF705FA8MVS1 300 aaPredicted RBP7.96□□□□□ -1.14
USP11-209ENST00000488848 SNAPINO95295 136 aa7.96□□□□□ -1.14
USP11-209ENST00000488848 GCGP01275 180 aa7.96□□□□□ -1.14
USP11-209ENST00000488848 HLA-DRB4P13762 266 aa7.96□□□□□ -1.14
USP11-209ENST00000488848 RPL11P62913 178 aaKnown RBP7.96□□□□□ -1.14
USP11-209ENST00000488848 GUCA2BQ16661 112 aa7.96□□□□□ -1.14
USP11-209ENST00000488848 ZNF738Q8NE65 137 aa7.96□□□□□ -1.14
USP11-209ENST00000488848 LINC00479Q96M42 142 aa7.96□□□□□ -1.14
USP11-209ENST00000488848 PRR25Q96S07 402 aa7.96□□□□□ -1.14
USP11-209ENST00000488848 AGPAT4-IT1Q9H0P7 198 aa7.96□□□□□ -1.14
USP11-209ENST00000488848 MAP6D1Q9H9H5 199 aa7.96□□□□□ -1.14
USP11-209ENST00000488848 BIN3Q9NQY0 253 aa7.96□□□□□ -1.14
USP11-209ENST00000488848 C19orf73Q9NVV2 129 aa7.96□□□□□ -1.14
USP11-209ENST00000488848 TMEM242Q9NWH2 141 aa7.96□□□□□ -1.14
USP11-209ENST00000488848 ZNF492Q9P255 531 aa7.96□□□□□ -1.14
USP11-209ENST00000488848 HLA-DRB4X5D2U9 266 aa7.96□□□□□ -1.14
USP11-209ENST00000488848 IGKV2-40A0A087WW87 121 aaPredicted RBP7.95□□□□□ -1.14
USP11-209ENST00000488848 TRAV8-1A0A0A6YYK1 113 aa7.95□□□□□ -1.14
USP11-209ENST00000488848 IGKV2D-40P01614 121 aaPredicted RBP7.95□□□□□ -1.14
USP11-209ENST00000488848 APOC3P02656 99 aa7.95□□□□□ -1.14
USP11-209ENST00000488848 ZNF138P52744 262 aa7.95□□□□□ -1.14
USP11-209ENST00000488848 EGFEM1PQ0D2K5 195 aa7.95□□□□□ -1.14
USP11-209ENST00000488848 PRR31Q5SQ13 230 aa7.95□□□□□ -1.14
USP11-209ENST00000488848 IGFL4Q6B9Z1 124 aa7.95□□□□□ -1.14
USP11-209ENST00000488848 BAGE2Q86Y30 109 aa7.95□□□□□ -1.14
USP11-209ENST00000488848 CLRN3Q8NCR9 226 aa7.95□□□□□ -1.14
USP11-209ENST00000488848 ISOC2Q96AB3 205 aa7.95□□□□□ -1.14
USP11-209ENST00000488848 VGLL1Q99990 258 aa7.95□□□□□ -1.14
USP11-209ENST00000488848 C19orf71A6NCJ1 209 aa7.94□□□□□ -1.14
USP11-209ENST00000488848 KLLNB2CW77 178 aa7.94□□□□□ -1.14
USP11-209ENST00000488848 K7EN84 100 aa7.94□□□□□ -1.14
USP11-209ENST00000488848 DUSP14O95147 198 aaKnown RBP7.94□□□□□ -1.14
USP11-209ENST00000488848 ZNF688P0C7X2 276 aa7.94□□□□□ -1.14
USP11-209ENST00000488848 CD33P20138 364 aa7.94□□□□□ -1.14
USP11-209ENST00000488848 ZNF674Q2M3X9 581 aa7.94□□□□□ -1.14
USP11-209ENST00000488848 CT83Q5H943 113 aa7.94□□□□□ -1.14
USP11-209ENST00000488848 PSMG4Q5JS54 123 aa7.94□□□□□ -1.14
USP11-209ENST00000488848 TMEM78Q5T7P6 136 aa7.94□□□□□ -1.14
USP11-209ENST00000488848 AMTNQ6UX39 209 aa7.94□□□□□ -1.14
USP11-209ENST00000488848 GBGT1Q8N5D6 347 aa7.94□□□□□ -1.14
USP11-209ENST00000488848 OR10J6PQ8NGY7 276 aa7.94□□□□□ -1.14
USP11-209ENST00000488848 SPATA3Q8NHX4 192 aa7.94□□□□□ -1.14
USP11-209ENST00000488848 OCC1Q8TAD7 63 aa7.94□□□□□ -1.14
USP11-209ENST00000488848 OSTCQ9NRP0 149 aa7.94□□□□□ -1.14
USP11-209ENST00000488848 TRAV34A0A0B4J273 112 aa7.93□□□□□ -1.14
USP11-209ENST00000488848 H3BMM0 161 aa7.93□□□□□ -1.14
USP11-209ENST00000488848 ZFAND2AQ8N6M9 145 aa7.93□□□□□ -1.14
USP11-209ENST00000488848 NDFIP1Q9BT67 221 aa7.93□□□□□ -1.14
USP11-209ENST00000488848 CTDSP1Q9GZU7 261 aa7.93□□□□□ -1.14
USP11-209ENST00000488848 ZMAT5Q9UDW3 170 aaKnown RBP7.93□□□□□ -1.14
USP11-209ENST00000488848 IGKV3-7A0A075B6H7 116 aa7.92□□□□□ -1.14
USP11-209ENST00000488848 CXorf65A6NEN9 183 aa7.92□□□□□ -1.14
USP11-209ENST00000488848 OR11H12B2RN74 326 aa7.92□□□□□ -1.14
USP11-209ENST00000488848 PPP1R2P9O14990 202 aa7.92□□□□□ -1.14
USP11-209ENST00000488848 CT45A10P0DMU9 189 aa7.92□□□□□ -1.14
USP11-209ENST00000488848 CEBPGP53567 150 aa7.92□□□□□ -1.14
USP11-209ENST00000488848 DEFB131AP59861 70 aa7.92□□□□□ -1.14
USP11-209ENST00000488848 Q6AWC8 147 aa7.92□□□□□ -1.14
USP11-209ENST00000488848 EBLN2Q6P2I7 272 aa7.92□□□□□ -1.14
USP11-209ENST00000488848 ANAPC16Q96DE5 110 aa7.92□□□□□ -1.14
USP11-209ENST00000488848 MDFIQ99750 246 aa7.92□□□□□ -1.14
USP11-209ENST00000488848 TUBA4BQ9H853 241 aa7.92□□□□□ -1.14
USP11-209ENST00000488848 AGRNO00468 2067 aa7.91□□□□□ -1.14
USP11-209ENST00000488848 C7orf77A4D0Y5 90 aa7.91□□□□□ -1.14
USP11-209ENST00000488848 FAM231BA6NCW3 169 aa7.91□□□□□ -1.14
USP11-209ENST00000488848 PGPEP1LA6NFU8 196 aa7.91□□□□□ -1.14
USP11-209ENST00000488848 MT-ND4LP03901 98 aa7.91□□□□□ -1.14
USP11-209ENST00000488848 CXCL1P09341 107 aa7.91□□□□□ -1.14
USP11-209ENST00000488848 TFPI2P48307 235 aa7.91□□□□□ -1.14
USP11-209ENST00000488848 ADIRFQ15847 76 aa7.91□□□□□ -1.14
USP11-209ENST00000488848 SMUG1Q53HV7 270 aa7.91□□□□□ -1.14
USP11-209ENST00000488848 GDF5OSQ5U4N7 250 aa7.91□□□□□ -1.14
USP11-209ENST00000488848 PRNTQ86SH4 94 aa7.91□□□□□ -1.14
USP11-209ENST00000488848 OR4B1Q8NGF8 309 aa7.91□□□□□ -1.14
USP11-209ENST00000488848 ZC2HC1AQ96GY0 325 aa7.91□□□□□ -1.14
USP11-209ENST00000488848 SFRP2Q96HF1 295 aa7.91□□□□□ -1.14
USP11-209ENST00000488848 IMMP2LQ96T52 175 aa7.91□□□□□ -1.14
USP11-209ENST00000488848 RPH3ALQ9UNE2 315 aa7.91□□□□□ -1.14
USP11-209ENST00000488848 F6UB75 175 aa7.9□□□□□ -1.14
USP11-209ENST00000488848 AMBPP02760 352 aa7.9□□□□□ -1.14
USP11-209ENST00000488848 TSPOP30536 169 aa7.9□□□□□ -1.14
USP11-209ENST00000488848 LEPP41159 167 aa7.9□□□□□ -1.14
USP11-209ENST00000488848 CRIP1P50238 77 aa7.9□□□□□ -1.14
USP11-209ENST00000488848 HIST1H1AQ02539 215 aaPredicted RBP7.9□□□□□ -1.14
USP11-209ENST00000488848 ERCC8Q13216 396 aa7.9□□□□□ -1.14
USP11-209ENST00000488848 TRPT1Q86TN4 253 aaKnown RBP7.9□□□□□ -1.14
USP11-209ENST00000488848 WFDC3Q8IUB2 231 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms