RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 TMEM167BQ9NRX6 74 aa9.28□□□□□ -0.92
PHF1-210ENST00000488767 CSMD3Q7Z407 3707 aa9.28□□□□□ -0.92
PHF1-210ENST00000488767 IGKV2-40A0A087WW87 121 aaPredicted RBP9.27□□□□□ -0.93
PHF1-210ENST00000488767 LCE6AA0A183 80 aa9.27□□□□□ -0.93
PHF1-210ENST00000488767 RBAKDNA6NC62 111 aa9.27□□□□□ -0.93
PHF1-210ENST00000488767 ZNF705GA8MUZ8 300 aaPredicted RBP9.27□□□□□ -0.93
PHF1-210ENST00000488767 J3KRW8 73 aa9.27□□□□□ -0.93
PHF1-210ENST00000488767 PFDN1O60925 122 aa9.27□□□□□ -0.93
PHF1-210ENST00000488767 IGKV2D-40P01614 121 aaPredicted RBP9.27□□□□□ -0.93
PHF1-210ENST00000488767 SLC25A5P05141 298 aaKnown RBP9.27□□□□□ -0.93
PHF1-210ENST00000488767 STAG3L2P0CL84 134 aa9.27□□□□□ -0.93
PHF1-210ENST00000488767 STAG3L3P0CL85 134 aa9.27□□□□□ -0.93
PHF1-210ENST00000488767 CT45A10P0DMU9 189 aa9.27□□□□□ -0.93
PHF1-210ENST00000488767 ERCC8Q13216 396 aa9.27□□□□□ -0.93
PHF1-210ENST00000488767 GFI1BQ5VTD9 330 aa9.27□□□□□ -0.93
PHF1-210ENST00000488767 C9orf47Q6ZRZ4 202 aa9.27□□□□□ -0.93
PHF1-210ENST00000488767 IQCF2Q8IXL9 164 aa9.27□□□□□ -0.93
PHF1-210ENST00000488767 SUN5Q8TC36 379 aa9.27□□□□□ -0.93
PHF1-210ENST00000488767 C16orf74Q96GX8 76 aa9.27□□□□□ -0.93
PHF1-210ENST00000488767 YTHDF2Q9Y5A9 579 aaKnown RBP9.27□□□□□ -0.93
PHF1-210ENST00000488767 STARD9Q9P2P6 4700 aa9.26□□□□□ -0.93
PHF1-210ENST00000488767 PGPA6NDG6 321 aa9.26□□□□□ -0.93
PHF1-210ENST00000488767 K7EQM0 130 aa9.26□□□□□ -0.93
PHF1-210ENST00000488767 GPX1P07203 203 aa9.26□□□□□ -0.93
PHF1-210ENST00000488767 NMBP08949 121 aa9.26□□□□□ -0.93
PHF1-210ENST00000488767 ZNF138P52744 262 aa9.26□□□□□ -0.93
PHF1-210ENST00000488767 TCTAP57738 103 aa9.26□□□□□ -0.93
PHF1-210ENST00000488767 FAM222AQ5U5X8 452 aa9.26□□□□□ -0.93
PHF1-210ENST00000488767 ZNF493Q6ZR52 646 aa9.26□□□□□ -0.93
PHF1-210ENST00000488767 Q6ZTC4 211 aa9.26□□□□□ -0.93
PHF1-210ENST00000488767 AGPAT4-IT1Q9H0P7 198 aa9.26□□□□□ -0.93
PHF1-210ENST00000488767 RPH3ALQ9UNE2 315 aa9.26□□□□□ -0.93
PHF1-210ENST00000488767 CELA1Q9UNI1 258 aa9.26□□□□□ -0.93
PHF1-210ENST00000488767 TRAV12-3A0A0B4J271 114 aa9.25□□□□□ -0.93
PHF1-210ENST00000488767 TRBV7-9A0A0J9YWB2 115 aa9.25□□□□□ -0.93
PHF1-210ENST00000488767 CTXND1A0A1B0GTU2 59 aa9.25□□□□□ -0.93
PHF1-210ENST00000488767 C7orf71A4D174 169 aa9.25□□□□□ -0.93
PHF1-210ENST00000488767 LYRM9A8MSI8 78 aa9.25□□□□□ -0.93
PHF1-210ENST00000488767 EIF3GO75821 320 aaKnown RBP eCLIP9.25□□□□□ -0.93
PHF1-210ENST00000488767 SEC11BP0C7V7 166 aa9.25□□□□□ -0.93
PHF1-210ENST00000488767 GCHFRP30047 84 aa9.25□□□□□ -0.93
PHF1-210ENST00000488767 DAD1P61803 113 aa9.25□□□□□ -0.93
PHF1-210ENST00000488767 PYGO2Q9BRQ0 406 aa9.25□□□□□ -0.93
PHF1-210ENST00000488767 ZNF471Q9BX82 626 aaPredicted RBP9.25□□□□□ -0.93
PHF1-210ENST00000488767 DKK2Q9UBU2 259 aa9.25□□□□□ -0.93
PHF1-210ENST00000488767 DEFB131BA0A096LNP1 70 aa9.24□□□□□ -0.93
PHF1-210ENST00000488767 SERTM2A0A1B0GWG4 89 aa9.24□□□□□ -0.93
PHF1-210ENST00000488767 IGLL5B9A064 214 aa9.24□□□□□ -0.93
PHF1-210ENST00000488767 DIRC3C9JPN6 131 aa9.24□□□□□ -0.93
PHF1-210ENST00000488767 BCL2L11O43521 198 aa9.24□□□□□ -0.93
PHF1-210ENST00000488767 C1QBP02746 253 aa9.24□□□□□ -0.93
PHF1-210ENST00000488767 RNASE4P34096 147 aaKnown RBP9.24□□□□□ -0.93
PHF1-210ENST00000488767 C12orf74Q32Q52 190 aa9.24□□□□□ -0.93
PHF1-210ENST00000488767 STOML3Q8TAV4 291 aa9.24□□□□□ -0.93
PHF1-210ENST00000488767 TMEM263Q8WUH6 116 aaKnown RBP9.24□□□□□ -0.93
PHF1-210ENST00000488767 VGLL1Q99990 258 aa9.24□□□□□ -0.93
PHF1-210ENST00000488767 ZNF492Q9P255 531 aa9.24□□□□□ -0.93
PHF1-210ENST00000488767 TIMM8BQ9Y5J9 83 aaPredicted RBP9.24□□□□□ -0.93
PHF1-210ENST00000488767 LENEPQ9Y5L5 61 aa9.24□□□□□ -0.93
PHF1-210ENST00000488767 SNURFLB1AK76 121 aa9.23□□□□□ -0.93
PHF1-210ENST00000488767 UMAD1C9J7I0 102 aa9.23□□□□□ -0.93
PHF1-210ENST00000488767 CRISP2P16562 243 aa9.23□□□□□ -0.93
PHF1-210ENST00000488767 ZNF767PQ75MW2 155 aa9.23□□□□□ -0.93
PHF1-210ENST00000488767 C5orf17Q8NAS9 161 aa9.23□□□□□ -0.93
PHF1-210ENST00000488767 ZNF680Q8NEM1 530 aa9.23□□□□□ -0.93
PHF1-210ENST00000488767 TMED6Q8WW62 240 aa9.23□□□□□ -0.93
PHF1-210ENST00000488767 NDFIP1Q9BT67 221 aa9.23□□□□□ -0.93
PHF1-210ENST00000488767 CBY3A6NI87 242 aa9.22□□□□□ -0.93
PHF1-210ENST00000488767 KLLNB2CW77 178 aa9.22□□□□□ -0.93
PHF1-210ENST00000488767 RGS13O14921 159 aa9.22□□□□□ -0.93
PHF1-210ENST00000488767 LY6G6CO95867 125 aa9.22□□□□□ -0.93
PHF1-210ENST00000488767 TPT1P13693 172 aaKnown RBP9.22□□□□□ -0.93
PHF1-210ENST00000488767 EIF5AL1Q6IS14 154 aaKnown RBP9.22□□□□□ -0.93
PHF1-210ENST00000488767 GOLT1AQ6ZVE7 132 aa9.22□□□□□ -0.93
PHF1-210ENST00000488767 AKAP14Q86UN6 197 aa9.22□□□□□ -0.93
PHF1-210ENST00000488767 Q8TAT8 98 aa9.22□□□□□ -0.93
PHF1-210ENST00000488767 FAM19A4Q96LR4 140 aa9.22□□□□□ -0.93
PHF1-210ENST00000488767 DEFB130BP0DP73 79 aa9.21□□□□□ -0.94
PHF1-210ENST00000488767 DEFB130AP0DP74 79 aa9.21□□□□□ -0.94
PHF1-210ENST00000488767 HTN3P15516 51 aa9.21□□□□□ -0.94
PHF1-210ENST00000488767 AZU1P20160 251 aa9.21□□□□□ -0.94
PHF1-210ENST00000488767 BTN1A1Q13410 526 aa9.21□□□□□ -0.94
PHF1-210ENST00000488767 KIR3DS1Q14943 382 aa9.21□□□□□ -0.94
PHF1-210ENST00000488767 DPPA3Q6W0C5 159 aa9.21□□□□□ -0.94
PHF1-210ENST00000488767 TMUB2Q71RG4 321 aa9.21□□□□□ -0.94
PHF1-210ENST00000488767 RNASE8Q8TDE3 154 aaKnown RBP9.21□□□□□ -0.94
PHF1-210ENST00000488767 FAM210BQ96KR6 192 aa9.21□□□□□ -0.94
PHF1-210ENST00000488767 NDUFAF3Q9BU61 184 aa9.21□□□□□ -0.94
PHF1-210ENST00000488767 NKX6-2Q9C056 277 aaPredicted RBP9.21□□□□□ -0.94
PHF1-210ENST00000488767 DYNC2H1Q8NCM8 4307 aaKnown RBP9.21□□□□□ -0.94
PHF1-210ENST00000488767 hCG_2014768A0A024R1R8 64 aa9.2□□□□□ -0.94
PHF1-210ENST00000488767 A0A1W2PRE2 83 aa9.2□□□□□ -0.94
PHF1-210ENST00000488767 MAP1LC3B2A6NCE7 125 aa9.2□□□□□ -0.94
PHF1-210ENST00000488767 FBLL1A6NHQ2 334 aaKnown RBP9.2□□□□□ -0.94
PHF1-210ENST00000488767 IFNA7P01567 189 aa9.2□□□□□ -0.94
PHF1-210ENST00000488767 SUMO1P63165 101 aaKnown RBP9.2□□□□□ -0.94
PHF1-210ENST00000488767 CD300CQ08708 224 aa9.2□□□□□ -0.94
PHF1-210ENST00000488767 LGALSLQ3ZCW2 172 aaPredicted RBP9.2□□□□□ -0.94
PHF1-210ENST00000488767 ZFP69Q49AA0 526 aa9.2□□□□□ -0.94
PHF1-210ENST00000488767 EIF4E3Q8N5X7 224 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms