RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 INO80EQ8NBZ0 244 aaPredicted RBP11.31□□□□□ -0.6
CTDSP1-209ENST00000488627 OR10G4Q8NGN3 311 aa11.31□□□□□ -0.6
CTDSP1-209ENST00000488627 OR10G9Q8NGN4 311 aa11.31□□□□□ -0.6
CTDSP1-209ENST00000488627 OR10G7Q8NGN6 311 aa11.31□□□□□ -0.6
CTDSP1-209ENST00000488627 PSMG3Q9BT73 122 aaPredicted RBP11.31□□□□□ -0.6
CTDSP1-209ENST00000488627 Q9H3A6 140 aa11.31□□□□□ -0.6
CTDSP1-209ENST00000488627 VPS13DQ5THJ4 4388 aa11.31□□□□□ -0.6
CTDSP1-209ENST00000488627 TRAV12-3A0A0B4J271 114 aa11.3□□□□□ -0.6
CTDSP1-209ENST00000488627 LYRM9A8MSI8 78 aa11.3□□□□□ -0.6
CTDSP1-209ENST00000488627 J3KRW8 73 aa11.3□□□□□ -0.6
CTDSP1-209ENST00000488627 ZNF324O75467 553 aaPredicted RBP11.3□□□□□ -0.6
CTDSP1-209ENST00000488627 HTN1P15515 57 aa11.3□□□□□ -0.6
CTDSP1-209ENST00000488627 CRISP2P16562 243 aa11.3□□□□□ -0.6
CTDSP1-209ENST00000488627 PQLC2Q6ZP29 291 aa11.3□□□□□ -0.6
CTDSP1-209ENST00000488627 ZNF493Q6ZR52 646 aa11.3□□□□□ -0.6
CTDSP1-209ENST00000488627 ZFAND2AQ8N6M9 145 aa11.3□□□□□ -0.6
CTDSP1-209ENST00000488627 SH3BGRL3Q9H299 93 aa11.3□□□□□ -0.6
CTDSP1-209ENST00000488627 A0A1W2PPV4 95 aa11.29□□□□□ -0.6
CTDSP1-209ENST00000488627 SLC25A5P05141 298 aaKnown RBP11.29□□□□□ -0.6
CTDSP1-209ENST00000488627 NMBP08949 121 aa11.29□□□□□ -0.6
CTDSP1-209ENST00000488627 DAD1P61803 113 aa11.29□□□□□ -0.6
CTDSP1-209ENST00000488627 SERF2P84101 59 aa11.29□□□□□ -0.6
CTDSP1-209ENST00000488627 CD300CQ08708 224 aa11.29□□□□□ -0.6
CTDSP1-209ENST00000488627 RPL7L1Q6DKI1 246 aaKnown RBP11.29□□□□□ -0.6
CTDSP1-209ENST00000488627 TMEM263Q8WUH6 116 aaKnown RBP11.29□□□□□ -0.6
CTDSP1-209ENST00000488627 C16orf74Q96GX8 76 aa11.29□□□□□ -0.6
CTDSP1-209ENST00000488627 ZNF492Q9P255 531 aa11.29□□□□□ -0.6
CTDSP1-209ENST00000488627 C7orf71A4D174 169 aa11.28□□□□□ -0.6
CTDSP1-209ENST00000488627 HMGB3O15347 200 aaKnown RBP11.28□□□□□ -0.6
CTDSP1-209ENST00000488627 TIMM8BQ9Y5J9 83 aaPredicted RBP11.28□□□□□ -0.6
CTDSP1-209ENST00000488627 RBAKDNA6NC62 111 aa11.27□□□□□ -0.61
CTDSP1-209ENST00000488627 SMLR1H3BR10 107 aa11.27□□□□□ -0.61
CTDSP1-209ENST00000488627 STAG3L2P0CL84 134 aa11.27□□□□□ -0.61
CTDSP1-209ENST00000488627 STAG3L3P0CL85 134 aa11.27□□□□□ -0.61
CTDSP1-209ENST00000488627 CDC34P49427 236 aaPredicted RBP11.27□□□□□ -0.61
CTDSP1-209ENST00000488627 ZNF138P52744 262 aa11.27□□□□□ -0.61
CTDSP1-209ENST00000488627 BTN1A1Q13410 526 aa11.27□□□□□ -0.61
CTDSP1-209ENST00000488627 TMEM78Q5T7P6 136 aa11.27□□□□□ -0.61
CTDSP1-209ENST00000488627 PRR9Q5T870 116 aa11.27□□□□□ -0.61
CTDSP1-209ENST00000488627 SUN5Q8TC36 379 aa11.27□□□□□ -0.61
CTDSP1-209ENST00000488627 RAB24Q969Q5 203 aa11.27□□□□□ -0.61
CTDSP1-209ENST00000488627 FAM210BQ96KR6 192 aa11.27□□□□□ -0.61
CTDSP1-209ENST00000488627 PYGO2Q9BRQ0 406 aa11.27□□□□□ -0.61
CTDSP1-209ENST00000488627 OTORQ9NRC9 128 aa11.27□□□□□ -0.61
CTDSP1-209ENST00000488627 TRBV7-9A0A0J9YWB2 115 aa11.26□□□□□ -0.61
CTDSP1-209ENST00000488627 PGPA6NDG6 321 aa11.26□□□□□ -0.61
CTDSP1-209ENST00000488627 DIRC3C9JPN6 131 aa11.26□□□□□ -0.61
CTDSP1-209ENST00000488627 ARL14EPLP0DKL9 152 aa11.26□□□□□ -0.61
CTDSP1-209ENST00000488627 DEFB130BP0DP73 79 aa11.26□□□□□ -0.61
CTDSP1-209ENST00000488627 DEFB130AP0DP74 79 aa11.26□□□□□ -0.61
CTDSP1-209ENST00000488627 RNASE4P34096 147 aaKnown RBP11.26□□□□□ -0.61
CTDSP1-209ENST00000488627 CSN1S1P47710 185 aa11.26□□□□□ -0.61
CTDSP1-209ENST00000488627 Q6ZQT7 251 aa11.26□□□□□ -0.61
CTDSP1-209ENST00000488627 LINC00612Q8N6U2 182 aa11.26□□□□□ -0.61
CTDSP1-209ENST00000488627 Q8TAT8 98 aa11.26□□□□□ -0.61
CTDSP1-209ENST00000488627 RXFP4Q8TDU9 374 aa11.26□□□□□ -0.61
CTDSP1-209ENST00000488627 LINC00467Q9BRT7 94 aa11.26□□□□□ -0.61
CTDSP1-209ENST00000488627 NDUFAF3Q9BU61 184 aa11.26□□□□□ -0.61
CTDSP1-209ENST00000488627 NOP10Q9NPE3 64 aaKnown RBP11.26□□□□□ -0.61
CTDSP1-209ENST00000488627 CYTL1Q9NRR1 136 aa11.26□□□□□ -0.61
CTDSP1-209ENST00000488627 BORCS7-ASMTA0A0B4J1R7 106 aa11.25□□□□□ -0.61
CTDSP1-209ENST00000488627 MBP02144 154 aa11.25□□□□□ -0.61
CTDSP1-209ENST00000488627 HTN3P15516 51 aa11.25□□□□□ -0.61
CTDSP1-209ENST00000488627 CCDC28AQ8IWP9 274 aa11.25□□□□□ -0.61
CTDSP1-209ENST00000488627 GNPNAT1Q96EK6 184 aaPredicted RBP11.25□□□□□ -0.61
CTDSP1-209ENST00000488627 HYLS1Q96M11 299 aa11.25□□□□□ -0.61
CTDSP1-209ENST00000488627 CBY3A6NI87 242 aa11.24□□□□□ -0.61
CTDSP1-209ENST00000488627 ARPC5O15511 151 aa11.24□□□□□ -0.61
CTDSP1-209ENST00000488627 GPX1P07203 203 aa11.24□□□□□ -0.61
CTDSP1-209ENST00000488627 SSX7Q7RTT5 188 aa11.24□□□□□ -0.61
CTDSP1-209ENST00000488627 ARL6IP6Q8N6S5 226 aa11.24□□□□□ -0.61
CTDSP1-209ENST00000488627 OR11H4Q8NGC9 324 aa11.24□□□□□ -0.61
CTDSP1-209ENST00000488627 GCHFRP30047 84 aa11.23□□□□□ -0.61
CTDSP1-209ENST00000488627 DAZ2Q13117 558 aaKnown RBP11.23□□□□□ -0.61
CTDSP1-209ENST00000488627 ZNF726P1Q15940 193 aa11.23□□□□□ -0.61
CTDSP1-209ENST00000488627 ANXA2RQ3ZCQ2 193 aa11.23□□□□□ -0.61
CTDSP1-209ENST00000488627 TMEM88Q6PEY1 159 aa11.23□□□□□ -0.61
CTDSP1-209ENST00000488627 C11orf72Q8NBR9 251 aa11.23□□□□□ -0.61
CTDSP1-209ENST00000488627 TAAR5O14804 337 aa11.22□□□□□ -0.61
CTDSP1-209ENST00000488627 EPPK1P58107 5090 aaKnown RBP11.22□□□□□ -0.61
CTDSP1-209ENST00000488627 TMED6Q8WW62 240 aa11.22□□□□□ -0.61
CTDSP1-209ENST00000488627 ACTR3CQ9C0K3 210 aaPredicted RBP11.22□□□□□ -0.61
CTDSP1-209ENST00000488627 LENEPQ9Y5L5 61 aa11.22□□□□□ -0.61
CTDSP1-209ENST00000488627 FAM74A1Q5RGS3 127 aa11.21□□□□□ -0.61
CTDSP1-209ENST00000488627 GOLT1AQ6ZVE7 132 aa11.21□□□□□ -0.61
CTDSP1-209ENST00000488627 KCNRGQ8N5I3 272 aa11.21□□□□□ -0.61
CTDSP1-209ENST00000488627 EIF4E3Q8N5X7 224 aaKnown RBP11.21□□□□□ -0.61
CTDSP1-209ENST00000488627 CMTM2Q8TAZ6 248 aa11.21□□□□□ -0.61
CTDSP1-209ENST00000488627 TVP23CQ96ET8 276 aa11.21□□□□□ -0.61
CTDSP1-209ENST00000488627 ST6GAL2Q96JF0 529 aa11.21□□□□□ -0.61
CTDSP1-209ENST00000488627 GSN-AS1Q9NRJ2 163 aa11.21□□□□□ -0.61
CTDSP1-209ENST00000488627 TP53TG3Q9ULZ0 132 aa11.21□□□□□ -0.61
CTDSP1-209ENST00000488627 DNAH6Q9C0G6 4158 aa11.2□□□□□ -0.62
CTDSP1-209ENST00000488627 HMSDA8MTL9 139 aa11.2□□□□□ -0.62
CTDSP1-209ENST00000488627 SNURFLB1AK76 121 aa11.2□□□□□ -0.62
CTDSP1-209ENST00000488627 CXorf1O96002 111 aa11.2□□□□□ -0.62
CTDSP1-209ENST00000488627 ATP5G1P05496 136 aa11.2□□□□□ -0.62
CTDSP1-209ENST00000488627 P0DMU3 169 aa11.2□□□□□ -0.62
CTDSP1-209ENST00000488627 FAM231AP0DMU4 169 aa11.2□□□□□ -0.62
CTDSP1-209ENST00000488627 FAM231CP0DMU5 169 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms