RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 KRR1Q13601 381 aaKnown RBP1.57□□□□□ -2.16
ITGB1-214ENST00000488427 DHRS4L2Q6PKH6 230 aa1.57□□□□□ -2.16
ITGB1-214ENST00000488427 EPGNQ6UW88 154 aa1.57□□□□□ -2.16
ITGB1-214ENST00000488427 SYCE1Q8N0S2 351 aa1.57□□□□□ -2.16
ITGB1-214ENST00000488427 FAM24BQ8N5W8 94 aa1.57□□□□□ -2.16
ITGB1-214ENST00000488427 TRIML2Q8N7C3 387 aa1.57□□□□□ -2.16
ITGB1-214ENST00000488427 PFN4Q8NHR9 129 aa1.57□□□□□ -2.16
ITGB1-214ENST00000488427 MRPL57Q9BQC6 102 aaKnown RBP1.57□□□□□ -2.16
ITGB1-214ENST00000488427 C7orf50Q9BRJ6 194 aaKnown RBP1.57□□□□□ -2.16
ITGB1-214ENST00000488427 ZNF706Q9Y5V0 76 aaPredicted RBP1.57□□□□□ -2.16
ITGB1-214ENST00000488427 TRAV27A0A087WT01 109 aa1.56□□□□□ -2.16
ITGB1-214ENST00000488427 A0A087WUU8 490 aa1.56□□□□□ -2.16
ITGB1-214ENST00000488427 TRAV2A0A0B4J234 112 aa1.56□□□□□ -2.16
ITGB1-214ENST00000488427 PQLC2LA1A4F0 135 aa1.56□□□□□ -2.16
ITGB1-214ENST00000488427 A6NED7 52 aa1.56□□□□□ -2.16
ITGB1-214ENST00000488427 C5orf58C9J3I9 102 aa1.56□□□□□ -2.16
ITGB1-214ENST00000488427 H3BQF6 201 aa1.56□□□□□ -2.16
ITGB1-214ENST00000488427 J3QRK9 145 aa1.56□□□□□ -2.16
ITGB1-214ENST00000488427 SULT1B1O43704 296 aa1.56□□□□□ -2.16
ITGB1-214ENST00000488427 TPST1O60507 370 aa1.56□□□□□ -2.16
ITGB1-214ENST00000488427 KRT75O95678 551 aa1.56□□□□□ -2.16
ITGB1-214ENST00000488427 OR2H2O95918 312 aa1.56□□□□□ -2.16
ITGB1-214ENST00000488427 CD14P08571 375 aa1.56□□□□□ -2.16
ITGB1-214ENST00000488427 LINC00032P0C843 101 aa1.56□□□□□ -2.16
ITGB1-214ENST00000488427 PSMB6P28072 239 aa1.56□□□□□ -2.16
ITGB1-214ENST00000488427 TAS2R41P59536 307 aa1.56□□□□□ -2.16
ITGB1-214ENST00000488427 KISS1Q15726 138 aa1.56□□□□□ -2.16
ITGB1-214ENST00000488427 Q3ZCU0 254 aa1.56□□□□□ -2.16
ITGB1-214ENST00000488427 OGFRL1Q5TC84 451 aaPredicted RBP1.56□□□□□ -2.16
ITGB1-214ENST00000488427 WFDC10BQ8IUB3 73 aa1.56□□□□□ -2.16
ITGB1-214ENST00000488427 Q8IYB0 196 aa1.56□□□□□ -2.16
ITGB1-214ENST00000488427 FAM58AQ8N1B3 248 aa1.56□□□□□ -2.16
ITGB1-214ENST00000488427 FER1L6-AS1Q8NA97 138 aa1.56□□□□□ -2.16
ITGB1-214ENST00000488427 OR8J2Q8NGG1 315 aa1.56□□□□□ -2.16
ITGB1-214ENST00000488427 RHPN1-AS1Q9BWJ2 59 aa1.56□□□□□ -2.16
ITGB1-214ENST00000488427 MS4A6AQ9H2W1 248 aa1.56□□□□□ -2.16
ITGB1-214ENST00000488427 NMNAT1Q9HAN9 279 aaPredicted RBP1.56□□□□□ -2.16
ITGB1-214ENST00000488427 BCL2L10Q9HD36 194 aa1.56□□□□□ -2.16
ITGB1-214ENST00000488427 SMPXQ9UHP9 88 aa1.56□□□□□ -2.16
ITGB1-214ENST00000488427 RABAC1Q9UI14 185 aa1.56□□□□□ -2.16
ITGB1-214ENST00000488427 FIS1Q9Y3D6 152 aa1.56□□□□□ -2.16
ITGB1-214ENST00000488427 URGCP-MRPS24S4R325 110 aa1.56□□□□□ -2.16
ITGB1-214ENST00000488427 TRAV8-7A0A075B6U6 113 aa1.55□□□□□ -2.16
ITGB1-214ENST00000488427 TRAV1-1A0A0B4J248 108 aa1.55□□□□□ -2.16
ITGB1-214ENST00000488427 PRORSD1PA6NEY8 169 aa1.55□□□□□ -2.16
ITGB1-214ENST00000488427 FAM159BA6NKW6 160 aa1.55□□□□□ -2.16
ITGB1-214ENST00000488427 FFAR1O14842 300 aa1.55□□□□□ -2.16
ITGB1-214ENST00000488427 DENRO43583 198 aaKnown RBP1.55□□□□□ -2.16
ITGB1-214ENST00000488427 SH2D1AO60880 128 aa1.55□□□□□ -2.16
ITGB1-214ENST00000488427 GYPBP06028 91 aa1.55□□□□□ -2.16
ITGB1-214ENST00000488427 RPS27P42677 84 aaKnown RBP1.55□□□□□ -2.16
ITGB1-214ENST00000488427 FXYD7P58549 80 aa1.55□□□□□ -2.16
ITGB1-214ENST00000488427 CASP8Q14790 479 aa1.55□□□□□ -2.16
ITGB1-214ENST00000488427 SPA17Q15506 151 aa1.55□□□□□ -2.16
ITGB1-214ENST00000488427 TAL2Q16559 108 aa1.55□□□□□ -2.16
ITGB1-214ENST00000488427 GLYATQ6IB77 296 aa1.55□□□□□ -2.16
ITGB1-214ENST00000488427 ERICH5Q6P6B1 374 aa1.55□□□□□ -2.16
ITGB1-214ENST00000488427 DCXRQ7Z4W1 244 aa1.55□□□□□ -2.16
ITGB1-214ENST00000488427 OR10D4PQ8NGN7 298 aa1.55□□□□□ -2.16
ITGB1-214ENST00000488427 AGR3Q8TD06 166 aa1.55□□□□□ -2.16
ITGB1-214ENST00000488427 IFT81Q8WYA0 676 aa1.55□□□□□ -2.16
ITGB1-214ENST00000488427 SLAMF6Q96DU3 332 aa1.55□□□□□ -2.16
ITGB1-214ENST00000488427 DPH3Q96FX2 82 aa1.55□□□□□ -2.16
ITGB1-214ENST00000488427 PPP3R2Q96LZ3 170 aa1.55□□□□□ -2.16
ITGB1-214ENST00000488427 APOL4Q9BPW4 351 aa1.55□□□□□ -2.16
ITGB1-214ENST00000488427 TMEM208Q9BTX3 173 aa1.55□□□□□ -2.16
ITGB1-214ENST00000488427 CLEC2DQ9UHP7 191 aa1.55□□□□□ -2.16
ITGB1-214ENST00000488427 MED31Q9Y3C7 131 aa1.55□□□□□ -2.16
ITGB1-214ENST00000488427 TRBV7-1A0A0A6YYK4 115 aa1.54□□□□□ -2.16
ITGB1-214ENST00000488427 PGPA6NDG6 321 aa1.54□□□□□ -2.16
ITGB1-214ENST00000488427 OR5H14A6NHG9 310 aa1.54□□□□□ -2.16
ITGB1-214ENST00000488427 IBA57-AS1B1ANH7 110 aa1.54□□□□□ -2.16
ITGB1-214ENST00000488427 NDUFA4O00483 81 aa1.54□□□□□ -2.16
ITGB1-214ENST00000488427 FADS2O95864 444 aaKnown RBP1.54□□□□□ -2.16
ITGB1-214ENST00000488427 CYB5AP00167 134 aa1.54□□□□□ -2.16
ITGB1-214ENST00000488427 ISG15P05161 165 aa1.54□□□□□ -2.16
ITGB1-214ENST00000488427 PPP1CCP36873 323 aaKnown RBP1.54□□□□□ -2.16
ITGB1-214ENST00000488427 PLTPP55058 493 aa1.54□□□□□ -2.16
ITGB1-214ENST00000488427 SS18Q15532 418 aa1.54□□□□□ -2.16
ITGB1-214ENST00000488427 LYPD5Q6UWN5 251 aa1.54□□□□□ -2.16
ITGB1-214ENST00000488427 SLC25A26Q70HW3 274 aa1.54□□□□□ -2.16
ITGB1-214ENST00000488427 OR51T1Q8NGJ9 327 aa1.54□□□□□ -2.16
ITGB1-214ENST00000488427 OR6N2Q8NGY6 317 aa1.54□□□□□ -2.16
ITGB1-214ENST00000488427 TMEM239Q8WW34 195 aa1.54□□□□□ -2.16
ITGB1-214ENST00000488427 MAL2Q969L2 176 aa1.54□□□□□ -2.16
ITGB1-214ENST00000488427 ARL11Q969Q4 196 aa1.54□□□□□ -2.16
ITGB1-214ENST00000488427 HIST1H2BAQ96A08 127 aa1.54□□□□□ -2.16
ITGB1-214ENST00000488427 MRPS24Q96EL2 167 aaKnown RBP1.54□□□□□ -2.16
ITGB1-214ENST00000488427 NXF2Q9GZY0 626 aaKnown RBP1.54□□□□□ -2.16
ITGB1-214ENST00000488427 WASHC3Q9Y3C0 194 aa1.54□□□□□ -2.16
ITGB1-214ENST00000488427 V9GYY9 64 aa1.54□□□□□ -2.16
ITGB1-214ENST00000488427 AZIN1O14977 448 aa1.53□□□□□ -2.16
ITGB1-214ENST00000488427 DEGS1O15121 323 aa1.53□□□□□ -2.16
ITGB1-214ENST00000488427 TPM1P09493 284 aa1.53□□□□□ -2.16
ITGB1-214ENST00000488427 PPIBP23284 216 aaKnown RBP1.53□□□□□ -2.16
ITGB1-214ENST00000488427 S100A3P33764 101 aa1.53□□□□□ -2.16
ITGB1-214ENST00000488427 CDKN2CP42773 168 aa1.53□□□□□ -2.16
ITGB1-214ENST00000488427 PSMG4Q5JS54 123 aa1.53□□□□□ -2.16
ITGB1-214ENST00000488427 CLVS2Q5SYC1 327 aa1.53□□□□□ -2.16
ITGB1-214ENST00000488427 COX6B2Q6YFQ2 88 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms