RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 PPP1R2P9O14990 202 aa9.09□□□□□ -0.95
HLA-DOB-209ENST00000488325 FOLR2P14207 255 aa9.09□□□□□ -0.95
HLA-DOB-209ENST00000488325 NSUN5P1Q3KNT7 163 aa9.09□□□□□ -0.95
HLA-DOB-209ENST00000488325 LCN12Q6JVE5 192 aa9.09□□□□□ -0.95
HLA-DOB-209ENST00000488325 OCC1Q8TAD7 63 aa9.09□□□□□ -0.95
HLA-DOB-209ENST00000488325 DYNLRB2Q8TF09 96 aa9.09□□□□□ -0.95
HLA-DOB-209ENST00000488325 DLX4Q92988 240 aaPredicted RBP9.09□□□□□ -0.95
HLA-DOB-209ENST00000488325 ISOC2Q96AB3 205 aa9.09□□□□□ -0.95
HLA-DOB-209ENST00000488325 ANAPC16Q96DE5 110 aa9.09□□□□□ -0.95
HLA-DOB-209ENST00000488325 MLXQ9UH92 298 aa9.09□□□□□ -0.95
HLA-DOB-209ENST00000488325 TRAV8-2A0A0B4J237 113 aa9.08□□□□□ -0.96
HLA-DOB-209ENST00000488325 ISLRO14498 428 aa9.08□□□□□ -0.96
HLA-DOB-209ENST00000488325 NHLRC4P0CG21 123 aaPredicted RBP9.08□□□□□ -0.96
HLA-DOB-209ENST00000488325 KRTAP10-11P60412 298 aa9.08□□□□□ -0.96
HLA-DOB-209ENST00000488325 PAFAH1B2P68402 229 aa9.08□□□□□ -0.96
HLA-DOB-209ENST00000488325 FLI1Q01543 452 aaPredicted RBP9.08□□□□□ -0.96
HLA-DOB-209ENST00000488325 BTN1A1Q13410 526 aa9.08□□□□□ -0.96
HLA-DOB-209ENST00000488325 PSG3Q16557 428 aa9.08□□□□□ -0.96
HLA-DOB-209ENST00000488325 RNF212Q495C1 297 aa9.08□□□□□ -0.96
HLA-DOB-209ENST00000488325 LINC00479Q96M42 142 aa9.08□□□□□ -0.96
HLA-DOB-209ENST00000488325 DUX3Q96PT4 197 aa9.08□□□□□ -0.96
HLA-DOB-209ENST00000488325 TMEM242Q9NWH2 141 aa9.08□□□□□ -0.96
HLA-DOB-209ENST00000488325 ZFP30Q9Y2G7 519 aa9.08□□□□□ -0.96
HLA-DOB-209ENST00000488325 RBAKDNA6NC62 111 aa9.07□□□□□ -0.96
HLA-DOB-209ENST00000488325 CXorf65A6NEN9 183 aa9.07□□□□□ -0.96
HLA-DOB-209ENST00000488325 PGPEP1LA6NFU8 196 aa9.07□□□□□ -0.96
HLA-DOB-209ENST00000488325 H7BYZ3 331 aa9.07□□□□□ -0.96
HLA-DOB-209ENST00000488325 DNASE2O00115 360 aaPredicted RBP9.07□□□□□ -0.96
HLA-DOB-209ENST00000488325 SOCS3O14543 225 aa9.07□□□□□ -0.96
HLA-DOB-209ENST00000488325 OVOL1O14753 267 aa9.07□□□□□ -0.96
HLA-DOB-209ENST00000488325 GCGP01275 180 aa9.07□□□□□ -0.96
HLA-DOB-209ENST00000488325 LTAP01374 205 aa9.07□□□□□ -0.96
HLA-DOB-209ENST00000488325 MGST1P10620 155 aaKnown RBP9.07□□□□□ -0.96
HLA-DOB-209ENST00000488325 PRNTQ86SH4 94 aa9.07□□□□□ -0.96
HLA-DOB-209ENST00000488325 Q86TA4 180 aa9.07□□□□□ -0.96
HLA-DOB-209ENST00000488325 C15orf54Q8N8G6 183 aa9.07□□□□□ -0.96
HLA-DOB-209ENST00000488325 TUBA4BQ9H853 241 aa9.07□□□□□ -0.96
HLA-DOB-209ENST00000488325 PSG8Q9UQ74 426 aa9.07□□□□□ -0.96
HLA-DOB-209ENST00000488325 TRAV2A0A0B4J234 112 aa9.06□□□□□ -0.96
HLA-DOB-209ENST00000488325 CSN3P07498 182 aa9.06□□□□□ -0.96
HLA-DOB-209ENST00000488325 CD33P20138 364 aa9.06□□□□□ -0.96
HLA-DOB-209ENST00000488325 EDN2P20800 178 aa9.06□□□□□ -0.96
HLA-DOB-209ENST00000488325 HLA-DMBP28068 263 aa9.06□□□□□ -0.96
HLA-DOB-209ENST00000488325 IGFL4Q6B9Z1 124 aa9.06□□□□□ -0.96
HLA-DOB-209ENST00000488325 TMEM183AQ8IXX5 376 aa9.06□□□□□ -0.96
HLA-DOB-209ENST00000488325 RNF182Q8N6D2 247 aa9.06□□□□□ -0.96
HLA-DOB-209ENST00000488325 ZNF738Q8NE65 137 aa9.06□□□□□ -0.96
HLA-DOB-209ENST00000488325 OR10G8Q8NGN5 311 aa9.06□□□□□ -0.96
HLA-DOB-209ENST00000488325 SFRP2Q96HF1 295 aa9.06□□□□□ -0.96
HLA-DOB-209ENST00000488325 NDFIP1Q9BT67 221 aa9.06□□□□□ -0.96
HLA-DOB-209ENST00000488325 SIGLEC8Q9NYZ4 499 aa9.06□□□□□ -0.96
HLA-DOB-209ENST00000488325 DNAH7Q8WXX0 4024 aa9.05□□□□□ -0.96
HLA-DOB-209ENST00000488325 IGKV3-7A0A075B6H7 116 aa9.05□□□□□ -0.96
HLA-DOB-209ENST00000488325 IGKV2-40A0A087WW87 121 aaPredicted RBP9.05□□□□□ -0.96
HLA-DOB-209ENST00000488325 TRAV8-1A0A0A6YYK1 113 aa9.05□□□□□ -0.96
HLA-DOB-209ENST00000488325 ADARB2-AS1A8MUL3 147 aa9.05□□□□□ -0.96
HLA-DOB-209ENST00000488325 IGKV2D-40P01614 121 aaPredicted RBP9.05□□□□□ -0.96
HLA-DOB-209ENST00000488325 IGLV2-11P01706 119 aa9.05□□□□□ -0.96
HLA-DOB-209ENST00000488325 IGLV2-8P01709 118 aa9.05□□□□□ -0.96
HLA-DOB-209ENST00000488325 ERVFC1-1P60608 527 aa9.05□□□□□ -0.96
HLA-DOB-209ENST00000488325 SNRPD3P62318 126 aaKnown RBP9.05□□□□□ -0.96
HLA-DOB-209ENST00000488325 SAPCD1Q5SSQ6 148 aa9.05□□□□□ -0.96
HLA-DOB-209ENST00000488325 TMEM88Q6PEY1 159 aa9.05□□□□□ -0.96
HLA-DOB-209ENST00000488325 CBLN2Q8IUK8 224 aa9.05□□□□□ -0.96
HLA-DOB-209ENST00000488325 WFDC9Q8NEX5 89 aa9.05□□□□□ -0.96
HLA-DOB-209ENST00000488325 SGK494Q96LW2 274 aa9.05□□□□□ -0.96
HLA-DOB-209ENST00000488325 MS4A6AQ9H2W1 248 aa9.05□□□□□ -0.96
HLA-DOB-209ENST00000488325 OSTCQ9NRP0 149 aa9.05□□□□□ -0.96
HLA-DOB-209ENST00000488325 TRAV25A0A0B4J276 109 aa9.04□□□□□ -0.96
HLA-DOB-209ENST00000488325 ZNF705FA8MVS1 300 aaPredicted RBP9.04□□□□□ -0.96
HLA-DOB-209ENST00000488325 K7EN84 100 aa9.04□□□□□ -0.96
HLA-DOB-209ENST00000488325 K7EQG2 157 aa9.04□□□□□ -0.96
HLA-DOB-209ENST00000488325 PF4P02776 101 aa9.04□□□□□ -0.96
HLA-DOB-209ENST00000488325 CT45A10P0DMU9 189 aa9.04□□□□□ -0.96
HLA-DOB-209ENST00000488325 S100PP25815 95 aa9.04□□□□□ -0.96
HLA-DOB-209ENST00000488325 TMEM78Q5T7P6 136 aa9.04□□□□□ -0.96
HLA-DOB-209ENST00000488325 RBPMS2Q6ZRY4 209 aaKnown RBP9.04□□□□□ -0.96
HLA-DOB-209ENST00000488325 FAM231DQ6ZW35 169 aa9.04□□□□□ -0.96
HLA-DOB-209ENST00000488325 WFDC3Q8IUB2 231 aa9.04□□□□□ -0.96
HLA-DOB-209ENST00000488325 GBGT1Q8N5D6 347 aa9.04□□□□□ -0.96
HLA-DOB-209ENST00000488325 OR10J6PQ8NGY7 276 aa9.04□□□□□ -0.96
HLA-DOB-209ENST00000488325 DCANP1Q8TF63 244 aa9.04□□□□□ -0.96
HLA-DOB-209ENST00000488325 MLST8Q9BVC4 326 aa9.04□□□□□ -0.96
HLA-DOB-209ENST00000488325 ZNF492Q9P255 531 aa9.04□□□□□ -0.96
HLA-DOB-209ENST00000488325 OR5I1Q13606 314 aa9.03□□□□□ -0.96
HLA-DOB-209ENST00000488325 IBA57Q5T440 356 aaKnown RBP9.03□□□□□ -0.96
HLA-DOB-209ENST00000488325 KCNIP4Q6PIL6 250 aa9.03□□□□□ -0.96
HLA-DOB-209ENST00000488325 ADAMTSL5Q6ZMM2 481 aa9.03□□□□□ -0.96
HLA-DOB-209ENST00000488325 C9orf47Q6ZRZ4 202 aa9.03□□□□□ -0.96
HLA-DOB-209ENST00000488325 NHLRC2Q8NBF2 726 aa9.03□□□□□ -0.96
HLA-DOB-209ENST00000488325 DAZAP1Q96EP5 407 aaKnown RBP9.03□□□□□ -0.96
HLA-DOB-209ENST00000488325 C20orf173Q96LM9 149 aa9.03□□□□□ -0.96
HLA-DOB-209ENST00000488325 IMMP2LQ96T52 175 aa9.03□□□□□ -0.96
HLA-DOB-209ENST00000488325 PRAC2D3DTV9 90 aa9.02□□□□□ -0.97
HLA-DOB-209ENST00000488325 GATCO43716 136 aaKnown RBP9.02□□□□□ -0.97
HLA-DOB-209ENST00000488325 TFPI2P48307 235 aa9.02□□□□□ -0.97
HLA-DOB-209ENST00000488325 ZNF138P52744 262 aa9.02□□□□□ -0.97
HLA-DOB-209ENST00000488325 DEFB114Q30KQ6 69 aa9.02□□□□□ -0.97
HLA-DOB-209ENST00000488325 PRR27Q6MZM9 219 aa9.02□□□□□ -0.97
HLA-DOB-209ENST00000488325 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms