RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 BAALCQ8WXS3 180 aa6.09□□□□□ -1.43
COL17A1-207ENST00000488320 STRAPQ9Y3F4 350 aaKnown RBP6.09□□□□□ -1.43
COL17A1-207ENST00000488320 LOC100131303A0A0U1RQF7 123 aa6.08□□□□□ -1.44
COL17A1-207ENST00000488320 H3BP45 60 aa6.08□□□□□ -1.44
COL17A1-207ENST00000488320 SLC17A3O00476 420 aa6.08□□□□□ -1.44
COL17A1-207ENST00000488320 SYNGR2O43760 224 aa6.08□□□□□ -1.44
COL17A1-207ENST00000488320 OR4E1P0C645 316 aa6.08□□□□□ -1.44
COL17A1-207ENST00000488320 SRPXP78539 464 aa6.08□□□□□ -1.44
COL17A1-207ENST00000488320 OPCMLQ14982 345 aa6.08□□□□□ -1.44
COL17A1-207ENST00000488320 MZT2AQ6P582 158 aa6.08□□□□□ -1.44
COL17A1-207ENST00000488320 C9orf47Q6ZRZ4 202 aa6.08□□□□□ -1.44
COL17A1-207ENST00000488320 OR10P1Q8NGE3 313 aa6.08□□□□□ -1.44
COL17A1-207ENST00000488320 LINC00477Q96M19 166 aa6.08□□□□□ -1.44
COL17A1-207ENST00000488320 SCGB3A2Q96PL1 93 aa6.08□□□□□ -1.44
COL17A1-207ENST00000488320 DPH3P1Q9H4G8 78 aa6.08□□□□□ -1.44
COL17A1-207ENST00000488320 EXTL2Q9UBQ6 330 aa6.08□□□□□ -1.44
COL17A1-207ENST00000488320 TRAV8-3A0A0A6YYJ7 113 aa6.07□□□□□ -1.44
COL17A1-207ENST00000488320 PIGBOS1A0A0B4J2F0 54 aa6.07□□□□□ -1.44
COL17A1-207ENST00000488320 KLLNB2CW77 178 aa6.07□□□□□ -1.44
COL17A1-207ENST00000488320 ANKRD65E5RJM6 399 aa6.07□□□□□ -1.44
COL17A1-207ENST00000488320 GOSR2O14653 212 aa6.07□□□□□ -1.44
COL17A1-207ENST00000488320 PITX3O75364 302 aa6.07□□□□□ -1.44
COL17A1-207ENST00000488320 IGLV2-11P01706 119 aa6.07□□□□□ -1.44
COL17A1-207ENST00000488320 TIRAPP58753 221 aa6.07□□□□□ -1.44
COL17A1-207ENST00000488320 RRAS2P62070 204 aaPredicted RBP6.07□□□□□ -1.44
COL17A1-207ENST00000488320 LAGE3Q14657 143 aa6.07□□□□□ -1.44
COL17A1-207ENST00000488320 ZNF846Q147U1 533 aa6.07□□□□□ -1.44
COL17A1-207ENST00000488320 PXDC1Q5TGL8 231 aa6.07□□□□□ -1.44
COL17A1-207ENST00000488320 Q8N976 141 aa6.07□□□□□ -1.44
COL17A1-207ENST00000488320 OR4C5Q8NGB2 326 aa6.07□□□□□ -1.44
COL17A1-207ENST00000488320 OR10G4Q8NGN3 311 aa6.07□□□□□ -1.44
COL17A1-207ENST00000488320 C15orf40Q8WUR7 153 aa6.07□□□□□ -1.44
COL17A1-207ENST00000488320 PRRT1Q99946 306 aa6.07□□□□□ -1.44
COL17A1-207ENST00000488320 NPVFQ9HCQ7 196 aa6.07□□□□□ -1.44
COL17A1-207ENST00000488320 H3BQ15 152 aa6.06□□□□□ -1.44
COL17A1-207ENST00000488320 COX7A2P2O60397 106 aa6.06□□□□□ -1.44
COL17A1-207ENST00000488320 GAS8-AS1O95177 125 aa6.06□□□□□ -1.44
COL17A1-207ENST00000488320 PFN1P07737 140 aaKnown RBP6.06□□□□□ -1.44
COL17A1-207ENST00000488320 AKAIN1P0CW23 69 aa6.06□□□□□ -1.44
COL17A1-207ENST00000488320 Q6ZRU5 148 aa6.06□□□□□ -1.44
COL17A1-207ENST00000488320 CLVS1Q8IUQ0 354 aaPredicted RBP6.06□□□□□ -1.44
COL17A1-207ENST00000488320 SAT2Q96F10 170 aaPredicted RBP6.06□□□□□ -1.44
COL17A1-207ENST00000488320 IGHV3-16A0A0C4DH30 117 aa6.05□□□□□ -1.44
COL17A1-207ENST00000488320 DUXBA0A1W2PPF3 345 aa6.05□□□□□ -1.44
COL17A1-207ENST00000488320 IGLC2P0DOY2 106 aa6.05□□□□□ -1.44
COL17A1-207ENST00000488320 SLC38A11Q08AI6 406 aa6.05□□□□□ -1.44
COL17A1-207ENST00000488320 GUK1Q16774 197 aa6.05□□□□□ -1.44
COL17A1-207ENST00000488320 Q6ZQT7 251 aa6.05□□□□□ -1.44
COL17A1-207ENST00000488320 ATP6V0E2Q8NHE4 81 aa6.05□□□□□ -1.44
COL17A1-207ENST00000488320 SRRQ9GZT4 340 aa6.05□□□□□ -1.44
COL17A1-207ENST00000488320 AGPAT4-IT1Q9H0P7 198 aa6.05□□□□□ -1.44
COL17A1-207ENST00000488320 Q9H521 79 aa6.05□□□□□ -1.44
COL17A1-207ENST00000488320 PSENENQ9NZ42 101 aa6.05□□□□□ -1.44
COL17A1-207ENST00000488320 SCP2D1Q9UJQ7 156 aa6.05□□□□□ -1.44
COL17A1-207ENST00000488320 COX11Q9Y6N1 276 aa6.05□□□□□ -1.44
COL17A1-207ENST00000488320 TRAV4A0A0B4J268 109 aa6.04□□□□□ -1.44
COL17A1-207ENST00000488320 FABP12A6NFH5 140 aa6.04□□□□□ -1.44
COL17A1-207ENST00000488320 GGTLC3B5MD39 225 aa6.04□□□□□ -1.44
COL17A1-207ENST00000488320 M0R3E3 92 aa6.04□□□□□ -1.44
COL17A1-207ENST00000488320 SLC25A6P12236 298 aa6.04□□□□□ -1.44
COL17A1-207ENST00000488320 SSBP1Q04837 148 aaKnown RBP6.04□□□□□ -1.44
COL17A1-207ENST00000488320 C4orf46Q504U0 113 aa6.04□□□□□ -1.44
COL17A1-207ENST00000488320 TOR2AQ5JU69 321 aa6.04□□□□□ -1.44
COL17A1-207ENST00000488320 MUC21Q5SSG8 566 aa6.04□□□□□ -1.44
COL17A1-207ENST00000488320 TMEM78Q5T7P6 136 aa6.04□□□□□ -1.44
COL17A1-207ENST00000488320 LELP1Q5T871 98 aa6.04□□□□□ -1.44
COL17A1-207ENST00000488320 C10orf113Q5VZT2 155 aa6.04□□□□□ -1.44
COL17A1-207ENST00000488320 FAM122CQ6P4D5 195 aa6.04□□□□□ -1.44
COL17A1-207ENST00000488320 RASL10AQ92737 203 aa6.04□□□□□ -1.44
COL17A1-207ENST00000488320 YIPF6Q96EC8 236 aa6.04□□□□□ -1.44
COL17A1-207ENST00000488320 FAM19A4Q96LR4 140 aa6.04□□□□□ -1.44
COL17A1-207ENST00000488320 SPXQ9BT56 116 aa6.04□□□□□ -1.44
COL17A1-207ENST00000488320 CCDC59Q9P031 241 aaKnown RBP6.04□□□□□ -1.44
COL17A1-207ENST00000488320 MGAT4CQ9UBM8 478 aa6.04□□□□□ -1.44
COL17A1-207ENST00000488320 RNF222A6NCQ9 220 aa6.03□□□□□ -1.44
COL17A1-207ENST00000488320 AGPAT2O15120 278 aa6.03□□□□□ -1.44
COL17A1-207ENST00000488320 NMBP08949 121 aa6.03□□□□□ -1.44
COL17A1-207ENST00000488320 HOXB5P09067 269 aa6.03□□□□□ -1.44
COL17A1-207ENST00000488320 HIST1H1EP10412 219 aaKnown RBP6.03□□□□□ -1.44
COL17A1-207ENST00000488320 CRISP2P16562 243 aa6.03□□□□□ -1.44
COL17A1-207ENST00000488320 VBP1P61758 197 aa6.03□□□□□ -1.44
COL17A1-207ENST00000488320 NCS1P62166 190 aa6.03□□□□□ -1.44
COL17A1-207ENST00000488320 C4orf48Q5BLP8 95 aa6.03□□□□□ -1.44
COL17A1-207ENST00000488320 ZNF546Q86UE3 836 aa6.03□□□□□ -1.44
COL17A1-207ENST00000488320 RAB2BQ8WUD1 216 aa6.03□□□□□ -1.44
COL17A1-207ENST00000488320 AP3S1Q92572 193 aa6.03□□□□□ -1.44
COL17A1-207ENST00000488320 RMI2Q96E14 147 aa6.03□□□□□ -1.44
COL17A1-207ENST00000488320 MRPL53Q96EL3 112 aaKnown RBP6.03□□□□□ -1.44
COL17A1-207ENST00000488320 PAXXQ9BUH6 204 aa6.03□□□□□ -1.44
COL17A1-207ENST00000488320 KRTAP9-2Q9BYQ4 174 aa6.03□□□□□ -1.44
COL17A1-207ENST00000488320 MCUBQ9NWR8 336 aa6.03□□□□□ -1.44
COL17A1-207ENST00000488320 RPH3ALQ9UNE2 315 aa6.03□□□□□ -1.44
COL17A1-207ENST00000488320 PRELID1Q9Y255 219 aa6.03□□□□□ -1.44
COL17A1-207ENST00000488320 IGKV2D-24A0A075B6R9 120 aa6.02□□□□□ -1.45
COL17A1-207ENST00000488320 POLR2GP62487 172 aaKnown RBP eCLIP6.02□□□□□ -1.45
COL17A1-207ENST00000488320 MRPS10P82664 201 aaKnown RBP6.02□□□□□ -1.45
COL17A1-207ENST00000488320 TMEM183BQ1AE95 376 aa6.02□□□□□ -1.45
COL17A1-207ENST00000488320 VWC2Q2TAL6 325 aa6.02□□□□□ -1.45
COL17A1-207ENST00000488320 PRR9Q5T870 116 aa6.02□□□□□ -1.45
COL17A1-207ENST00000488320 Q6ZRG5 221 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms