RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 Q8TAT8 98 aa12.25□□□□□ -0.45
RAPGEF3-211ENST00000488250 LOC102724200A0A096LPH7 203 aaPredicted RBP12.24□□□□□ -0.45
RAPGEF3-211ENST00000488250 IGHV3-49A0A0A0MS15 119 aa12.24□□□□□ -0.45
RAPGEF3-211ENST00000488250 ZNF324O75467 553 aaPredicted RBP12.24□□□□□ -0.45
RAPGEF3-211ENST00000488250 Q5PR19 223 aa12.24□□□□□ -0.45
RAPGEF3-211ENST00000488250 PRSS57Q6UWY2 283 aa12.24□□□□□ -0.45
RAPGEF3-211ENST00000488250 RNF182Q8N6D2 247 aa12.24□□□□□ -0.45
RAPGEF3-211ENST00000488250 PPP1R14DQ9NXH3 145 aa12.24□□□□□ -0.45
RAPGEF3-211ENST00000488250 ARMS2P0C7Q2 107 aa12.23□□□□□ -0.45
RAPGEF3-211ENST00000488250 NAGKQ9UJ70 344 aa12.23□□□□□ -0.45
RAPGEF3-211ENST00000488250 TSTD3H0UI37 97 aa12.23□□□□□ -0.45
RAPGEF3-211ENST00000488250 SCGB1D1O95968 90 aa12.23□□□□□ -0.45
RAPGEF3-211ENST00000488250 IGHV3-11P01762 117 aa12.23□□□□□ -0.45
RAPGEF3-211ENST00000488250 PSMB8P28062 276 aa12.23□□□□□ -0.45
RAPGEF3-211ENST00000488250 AMTP48728 403 aa12.23□□□□□ -0.45
RAPGEF3-211ENST00000488250 ZNF80P51504 273 aaPredicted RBP12.23□□□□□ -0.45
RAPGEF3-211ENST00000488250 Q6YL49 198 aa12.23□□□□□ -0.45
RAPGEF3-211ENST00000488250 BORCS7Q96B45 105 aa12.23□□□□□ -0.45
RAPGEF3-211ENST00000488250 NPFFR1Q9GZQ6 430 aa12.23□□□□□ -0.45
RAPGEF3-211ENST00000488250 MAP1AP78559 2803 aaPredicted RBP12.22□□□□□ -0.45
RAPGEF3-211ENST00000488250 POLQO75417 2590 aa12.22□□□□□ -0.45
RAPGEF3-211ENST00000488250 DMRTA1Q5VZB9 504 aa12.22□□□□□ -0.45
RAPGEF3-211ENST00000488250 ZNF493Q6ZR52 646 aa12.22□□□□□ -0.45
RAPGEF3-211ENST00000488250 VPREB3Q9UKI3 123 aa12.22□□□□□ -0.45
RAPGEF3-211ENST00000488250 FABP5P3A8MUU1 101 aa12.21□□□□□ -0.45
RAPGEF3-211ENST00000488250 SMAD7O15105 426 aaKnown RBP12.21□□□□□ -0.45
RAPGEF3-211ENST00000488250 ERCC8Q13216 396 aa12.21□□□□□ -0.45
RAPGEF3-211ENST00000488250 C9orf47Q6ZRZ4 202 aa12.21□□□□□ -0.45
RAPGEF3-211ENST00000488250 PSMG3-AS1Q96PY0 264 aa12.21□□□□□ -0.45
RAPGEF3-211ENST00000488250 AGPAT4-IT1Q9H0P7 198 aa12.21□□□□□ -0.45
RAPGEF3-211ENST00000488250 NRN1Q9NPD7 142 aa12.21□□□□□ -0.45
RAPGEF3-211ENST00000488250 CR1P17927 2039 aa12.21□□□□□ -0.45
RAPGEF3-211ENST00000488250 CSPG4Q6UVK1 2322 aa12.21□□□□□ -0.46
RAPGEF3-211ENST00000488250 CTRLP40313 264 aa12.21□□□□□ -0.46
RAPGEF3-211ENST00000488250 CTAG1AP78358 180 aa12.21□□□□□ -0.46
RAPGEF3-211ENST00000488250 ZNF664Q8N3J9 261 aa12.21□□□□□ -0.46
RAPGEF3-211ENST00000488250 PEF1Q9UBV8 284 aaKnown RBP12.21□□□□□ -0.46
RAPGEF3-211ENST00000488250 ABCA12Q86UK0 2595 aa12.21□□□□□ -0.46
RAPGEF3-211ENST00000488250 CELSR1Q9NYQ6 3014 aa12.2□□□□□ -0.46
RAPGEF3-211ENST00000488250 K7EMT4 169 aa12.2□□□□□ -0.46
RAPGEF3-211ENST00000488250 SOCS3O14543 225 aa12.2□□□□□ -0.46
RAPGEF3-211ENST00000488250 ZNF138P52744 262 aa12.2□□□□□ -0.46
RAPGEF3-211ENST00000488250 ZNF575Q86XF7 245 aa12.2□□□□□ -0.46
RAPGEF3-211ENST00000488250 KRTAP1-3Q8IUG1 177 aa12.2□□□□□ -0.46
RAPGEF3-211ENST00000488250 C16orf92Q96LL3 132 aa12.2□□□□□ -0.46
RAPGEF3-211ENST00000488250 PRRC2AP48634 2157 aaKnown RBP12.2□□□□□ -0.46
RAPGEF3-211ENST00000488250 NAV2Q8IVL1 2488 aa12.2□□□□□ -0.46
RAPGEF3-211ENST00000488250 IGLC6P0CF74 106 aa12.19□□□□□ -0.46
RAPGEF3-211ENST00000488250 PMCHP20382 165 aa12.19□□□□□ -0.46
RAPGEF3-211ENST00000488250 TMEM95Q3KNT9 176 aa12.19□□□□□ -0.46
RAPGEF3-211ENST00000488250 LINC01559Q495D7 138 aa12.19□□□□□ -0.46
RAPGEF3-211ENST00000488250 TMEM78Q5T7P6 136 aa12.19□□□□□ -0.46
RAPGEF3-211ENST00000488250 LYZL1Q6UWQ5 148 aa12.19□□□□□ -0.46
RAPGEF3-211ENST00000488250 NIT1Q86X76 327 aa12.19□□□□□ -0.46
RAPGEF3-211ENST00000488250 GPHB5Q86YW7 130 aa12.19□□□□□ -0.46
RAPGEF3-211ENST00000488250 CSMD2Q7Z408 3487 aa12.19□□□□□ -0.46
RAPGEF3-211ENST00000488250 APCP25054 2843 aa12.19□□□□□ -0.46
RAPGEF3-211ENST00000488250 IGHV7-4-1A0A0J9YVY3 117 aa12.19□□□□□ -0.46
RAPGEF3-211ENST00000488250 CYB5R2Q6BCY4 276 aa12.19□□□□□ -0.46
RAPGEF3-211ENST00000488250 LCNL1Q6ZST4 164 aa12.19□□□□□ -0.46
RAPGEF3-211ENST00000488250 IL17RELQ6ZVW7 336 aa12.19□□□□□ -0.46
RAPGEF3-211ENST00000488250 Q96MF0 132 aa12.19□□□□□ -0.46
RAPGEF3-211ENST00000488250 DAZ1Q9NQZ3 744 aaKnown RBP12.19□□□□□ -0.46
RAPGEF3-211ENST00000488250 LENEPQ9Y5L5 61 aa12.19□□□□□ -0.46
RAPGEF3-211ENST00000488250 HSBP1O75506 76 aa12.18□□□□□ -0.46
RAPGEF3-211ENST00000488250 CD33P20138 364 aa12.18□□□□□ -0.46
RAPGEF3-211ENST00000488250 HIST1H1AQ02539 215 aaPredicted RBP12.18□□□□□ -0.46
RAPGEF3-211ENST00000488250 CHCHD1Q96BP2 118 aaKnown RBP12.18□□□□□ -0.46
RAPGEF3-211ENST00000488250 URB1-AS1Q96HZ7 61 aa12.18□□□□□ -0.46
RAPGEF3-211ENST00000488250 CNFNQ9BYD5 112 aa12.18□□□□□ -0.46
RAPGEF3-211ENST00000488250 TMSB15BA0A087X1C1 80 aa12.17□□□□□ -0.46
RAPGEF3-211ENST00000488250 DDTP30046 118 aa12.17□□□□□ -0.46
RAPGEF3-211ENST00000488250 TEX43Q6ZNM6 134 aa12.17□□□□□ -0.46
RAPGEF3-211ENST00000488250 FER1L6-AS1Q8NA97 138 aa12.17□□□□□ -0.46
RAPGEF3-211ENST00000488250 TPPP3Q9BW30 176 aa12.17□□□□□ -0.46
RAPGEF3-211ENST00000488250 PRO1933Q9H354 126 aa12.17□□□□□ -0.46
RAPGEF3-211ENST00000488250 FAM106AQ4KMX7 169 aa12.17□□□□□ -0.46
RAPGEF3-211ENST00000488250 FAM19A2Q8N3H0 131 aa12.17□□□□□ -0.46
RAPGEF3-211ENST00000488250 C20orf173Q96LM9 149 aa12.17□□□□□ -0.46
RAPGEF3-211ENST00000488250 SMPXQ9UHP9 88 aa12.17□□□□□ -0.46
RAPGEF3-211ENST00000488250 RNF114Q9Y508 228 aa12.17□□□□□ -0.46
RAPGEF3-211ENST00000488250 ZFHX3Q15911 3703 aa12.16□□□□□ -0.46
RAPGEF3-211ENST00000488250 OVOL1O14753 267 aa12.16□□□□□ -0.46
RAPGEF3-211ENST00000488250 ZNF705DP0CH99 300 aaPredicted RBP12.16□□□□□ -0.46
RAPGEF3-211ENST00000488250 ZNF705BP0CI00 300 aaPredicted RBP12.16□□□□□ -0.46
RAPGEF3-211ENST00000488250 RNASEKQ6P5S7 137 aaKnown RBP12.16□□□□□ -0.46
RAPGEF3-211ENST00000488250 Q8N976 141 aa12.16□□□□□ -0.46
RAPGEF3-211ENST00000488250 MYOZ3Q8TDC0 251 aa12.16□□□□□ -0.46
RAPGEF3-211ENST00000488250 RHPN1-AS1Q9BWJ2 59 aa12.16□□□□□ -0.46
RAPGEF3-211ENST00000488250 UNC79Q9P2D8 2635 aa12.16□□□□□ -0.46
RAPGEF3-211ENST00000488250 ORM1P02763 201 aa12.15□□□□□ -0.46
RAPGEF3-211ENST00000488250 FOXE3Q13461 319 aa12.15□□□□□ -0.46
RAPGEF3-211ENST00000488250 PRR31Q5SQ13 230 aa12.15□□□□□ -0.46
RAPGEF3-211ENST00000488250 LINC00477Q96M19 166 aa12.15□□□□□ -0.46
RAPGEF3-211ENST00000488250 ZNF702PQ9H963 129 aa12.15□□□□□ -0.46
RAPGEF3-211ENST00000488250 HECTD1Q9ULT8 2610 aa12.15□□□□□ -0.46
RAPGEF3-211ENST00000488250 KIR2DL5BA0A0G2JN68 375 aa12.15□□□□□ -0.46
RAPGEF3-211ENST00000488250 KIR2DL5BA0A0G2JPC4 375 aa12.15□□□□□ -0.46
RAPGEF3-211ENST00000488250 ELANEP08246 267 aa12.15□□□□□ -0.46
RAPGEF3-211ENST00000488250 NTF3P20783 257 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms