RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 OMPP47874 163 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 MT4P47944 62 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 RAB5CP51148 216 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 UBE2D1P51668 147 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 TCL1AP56279 114 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 DNAJB13P59910 316 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 ELOF1P60002 83 aaKnown RBP-0.04□□□□□ -2.42
SMC4-219ENST00000487747 CDC42P60953 191 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 UBE2D3P61077 147 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 SNRPFP62306 86 aaKnown RBP-0.04□□□□□ -2.42
SMC4-219ENST00000487747 ARF6P62330 175 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 UBE2D2P62837 147 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 CCL8P80075 99 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 PSG9Q00887 426 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 Q0VG73 95 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 FADDQ13158 208 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 EIF3IQ13347 325 aaKnown RBP-0.04□□□□□ -2.42
SMC4-219ENST00000487747 ITGB3BPQ13352 177 aaPredicted RBP-0.04□□□□□ -2.42
SMC4-219ENST00000487747 TMED1Q13445 227 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 POU6F1Q14863 301 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 IAH1Q2TAA2 248 aaPredicted RBP-0.04□□□□□ -2.42
SMC4-219ENST00000487747 C12orf74Q32Q52 190 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 MORN2Q502X0 79 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 AKIRIN2Q53H80 203 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 KHDC3LQ587J8 217 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 C9orf116Q5BN46 136 aaPredicted RBP-0.04□□□□□ -2.42
SMC4-219ENST00000487747 RNASE10Q5GAN6 216 aaKnown RBP-0.04□□□□□ -2.42
SMC4-219ENST00000487747 NMSQ5H8A3 153 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 BRMS1LQ5PSV4 323 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 OGFRL1Q5TC84 451 aaPredicted RBP-0.04□□□□□ -2.42
SMC4-219ENST00000487747 CFAP126Q5VTH2 177 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 XAF1Q6GPH4 301 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 LPCAT3Q6P1A2 487 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 CLPSL2Q6UWE3 100 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 SCIMPQ6UWF3 145 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 GLIPR1L1Q6UWM5 242 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 TMEM14EPQ6UXP3 125 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 COX6B2Q6YFQ2 88 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 IDO2Q6ZQW0 420 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 Q6ZRX8 168 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 ZNF833PQ6ZTB9 187 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 ZNF720Q7Z2F6 126 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 SSBP3-AS1Q7Z2R9 100 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 TRAPPC5Q8IUR0 188 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 ATOH7Q8N100 152 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 OR5AS1Q8N127 324 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 KRT222Q8N1A0 295 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 LRRC18Q8N456 261 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 CLDN22Q8N7P3 220 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 LINC00301Q8NCQ3 95 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 MORN4Q8NDC4 146 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 SLC30A7Q8NEW0 376 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 OR4S1Q8NGB4 309 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 OR11H6Q8NGC7 330 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 OR51D1Q8NGF3 324 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 OR51A2Q8NGJ7 313 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 OR8D4Q8NGM9 314 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 OR2T10Q8NGZ9 312 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 OR10AC1Q8NH08 325 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 OR5AK2Q8NH90 309 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 CCL4L1Q8NHW4 92 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 VSTM2AQ8TAG5 236 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 GNPDA2Q8TDQ7 276 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 ZNF431Q8TF32 576 aaPredicted RBP-0.04□□□□□ -2.42
SMC4-219ENST00000487747 DDI1Q8WTU0 396 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 C4orf3Q8WVX3 66 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 LCN9Q8WX39 176 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 PP6455Q8WZ26 134 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 ANP32BQ92688 251 aaKnown RBP-0.04□□□□□ -2.42
SMC4-219ENST00000487747 TOMM6Q96B49 74 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 GPR146Q96CH1 333 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 DGCR14Q96DF8 476 aaKnown RBP-0.04□□□□□ -2.42
SMC4-219ENST00000487747 ZHX1-C8orf76Q96EF9 292 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 RMND5BQ96G75 393 aaPredicted RBP-0.04□□□□□ -2.42
SMC4-219ENST00000487747 DMAC1Q96GE9 116 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 COX14Q96I36 57 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 TEX37Q96LM6 180 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 CARD19Q96LW7 228 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 AQP10Q96PS8 301 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 PAIP2Q9BPZ3 127 aaKnown RBP-0.04□□□□□ -2.42
SMC4-219ENST00000487747 C20orf78Q9BR46 151 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 LLPHQ9BRT6 129 aaKnown RBP-0.04□□□□□ -2.42
SMC4-219ENST00000487747 GINS4Q9BRT9 223 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 C2orf88Q9BSF0 95 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 DDA1Q9BW61 102 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 MRPS26Q9BYN8 205 aaKnown RBP-0.04□□□□□ -2.42
SMC4-219ENST00000487747 IMUPQ9GZP8 106 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 CENPHQ9H3R5 247 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 BCL2L10Q9HD36 194 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 SAR1AQ9NR31 198 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 LINC00846Q9NV44 126 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 FGFR1OP2Q9NVK5 253 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 FAIMQ9NVQ4 179 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 CMTM6Q9NX76 183 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 COA4Q9NYJ1 87 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 USE1Q9NZ43 259 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 MRPL35Q9NZE8 188 aaKnown RBP-0.04□□□□□ -2.42
SMC4-219ENST00000487747 VPS29Q9UBQ0 182 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 EPDR1Q9UM22 224 aa-0.04□□□□□ -2.42
SMC4-219ENST00000487747 BOKQ9UMX3 212 aaPredicted RBP-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms