RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 DAD1P61803 113 aa6.74□□□□□ -1.33
LCN2-205ENST00000487719 FAM222AQ5U5X8 452 aa6.74□□□□□ -1.33
LCN2-205ENST00000487719 C9orf47Q6ZRZ4 202 aa6.74□□□□□ -1.33
LCN2-205ENST00000487719 STOML3Q8TAV4 291 aa6.74□□□□□ -1.33
LCN2-205ENST00000487719 TMEM263Q8WUH6 116 aaKnown RBP6.74□□□□□ -1.33
LCN2-205ENST00000487719 RAB24Q969Q5 203 aa6.74□□□□□ -1.33
LCN2-205ENST00000487719 HYLS1Q96M11 299 aa6.74□□□□□ -1.33
LCN2-205ENST00000487719 PYGO2Q9BRQ0 406 aa6.74□□□□□ -1.33
LCN2-205ENST00000487719 SH3BGRL3Q9H299 93 aa6.74□□□□□ -1.33
LCN2-205ENST00000487719 RPH3ALQ9UNE2 315 aa6.74□□□□□ -1.33
LCN2-205ENST00000487719 YTHDF2Q9Y5A9 579 aaKnown RBP6.74□□□□□ -1.33
LCN2-205ENST00000487719 CSMD3Q7Z407 3707 aa6.73□□□□□ -1.33
LCN2-205ENST00000487719 IGKV2-40A0A087WW87 121 aaPredicted RBP6.73□□□□□ -1.33
LCN2-205ENST00000487719 TRAV12-3A0A0B4J271 114 aa6.73□□□□□ -1.33
LCN2-205ENST00000487719 TRBV7-9A0A0J9YWB2 115 aa6.73□□□□□ -1.33
LCN2-205ENST00000487719 CTXND1A0A1B0GTU2 59 aa6.73□□□□□ -1.33
LCN2-205ENST00000487719 SERTM2A0A1B0GWG4 89 aa6.73□□□□□ -1.33
LCN2-205ENST00000487719 ZNF705GA8MUZ8 300 aaPredicted RBP6.73□□□□□ -1.33
LCN2-205ENST00000487719 IGLL5B9A064 214 aa6.73□□□□□ -1.33
LCN2-205ENST00000487719 HMGB3O15347 200 aaKnown RBP6.73□□□□□ -1.33
LCN2-205ENST00000487719 CRXO43186 299 aaPredicted RBP6.73□□□□□ -1.33
LCN2-205ENST00000487719 IGKV2D-40P01614 121 aaPredicted RBP6.73□□□□□ -1.33
LCN2-205ENST00000487719 STAG3L2P0CL84 134 aa6.73□□□□□ -1.33
LCN2-205ENST00000487719 STAG3L3P0CL85 134 aa6.73□□□□□ -1.33
LCN2-205ENST00000487719 ZNF138P52744 262 aa6.73□□□□□ -1.33
LCN2-205ENST00000487719 GFI1BQ5VTD9 330 aa6.73□□□□□ -1.33
LCN2-205ENST00000487719 Q6ZTC4 211 aa6.73□□□□□ -1.33
LCN2-205ENST00000487719 ARL6IP6Q8N6S5 226 aa6.73□□□□□ -1.33
LCN2-205ENST00000487719 ZNF680Q8NEM1 530 aa6.73□□□□□ -1.33
LCN2-205ENST00000487719 NDFIP1Q9BT67 221 aa6.73□□□□□ -1.33
LCN2-205ENST00000487719 ZNF471Q9BX82 626 aaPredicted RBP6.73□□□□□ -1.33
LCN2-205ENST00000487719 DKK2Q9UBU2 259 aa6.73□□□□□ -1.33
LCN2-205ENST00000487719 TIMM8BQ9Y5J9 83 aaPredicted RBP6.73□□□□□ -1.33
LCN2-205ENST00000487719 NACAE9PAV3 2078 aa6.72□□□□□ -1.33
LCN2-205ENST00000487719 STARD9Q9P2P6 4700 aa6.72□□□□□ -1.33
LCN2-205ENST00000487719 PGPA6NDG6 321 aa6.72□□□□□ -1.33
LCN2-205ENST00000487719 DIRC3C9JPN6 131 aa6.72□□□□□ -1.33
LCN2-205ENST00000487719 SMLR1H3BR10 107 aa6.72□□□□□ -1.33
LCN2-205ENST00000487719 RGS13O14921 159 aa6.72□□□□□ -1.33
LCN2-205ENST00000487719 CT45A10P0DMU9 189 aa6.72□□□□□ -1.33
LCN2-205ENST00000487719 PRB4P10163 310 aaPredicted RBP6.72□□□□□ -1.33
LCN2-205ENST00000487719 CRISP2P16562 243 aa6.72□□□□□ -1.33
LCN2-205ENST00000487719 GCHFRP30047 84 aa6.72□□□□□ -1.33
LCN2-205ENST00000487719 ERCC8Q13216 396 aa6.72□□□□□ -1.33
LCN2-205ENST00000487719 EIF5AL1Q6IS14 154 aaKnown RBP6.72□□□□□ -1.33
LCN2-205ENST00000487719 KCNRGQ8N5I3 272 aa6.72□□□□□ -1.33
LCN2-205ENST00000487719 C5orf17Q8NAS9 161 aa6.72□□□□□ -1.33
LCN2-205ENST00000487719 TMED6Q8WW62 240 aa6.72□□□□□ -1.33
LCN2-205ENST00000487719 ZNF503Q96F45 646 aa6.72□□□□□ -1.33
LCN2-205ENST00000487719 NKX6-2Q9C056 277 aaPredicted RBP6.72□□□□□ -1.33
LCN2-205ENST00000487719 AGPAT4-IT1Q9H0P7 198 aa6.72□□□□□ -1.33
LCN2-205ENST00000487719 ZNF492Q9P255 531 aa6.72□□□□□ -1.33
LCN2-205ENST00000487719 CELA1Q9UNI1 258 aa6.72□□□□□ -1.33
LCN2-205ENST00000487719 LENEPQ9Y5L5 61 aa6.72□□□□□ -1.33
LCN2-205ENST00000487719 FBLL1A6NHQ2 334 aaKnown RBP6.71□□□□□ -1.34
LCN2-205ENST00000487719 CBY3A6NI87 242 aa6.71□□□□□ -1.34
LCN2-205ENST00000487719 UMAD1C9J7I0 102 aa6.71□□□□□ -1.34
LCN2-205ENST00000487719 G3V3Q6 166 aa6.71□□□□□ -1.34
LCN2-205ENST00000487719 BCL2L11O43521 198 aa6.71□□□□□ -1.34
LCN2-205ENST00000487719 LY6G6CO95867 125 aa6.71□□□□□ -1.34
LCN2-205ENST00000487719 HTN3P15516 51 aa6.71□□□□□ -1.34
LCN2-205ENST00000487719 RNASE4P34096 147 aaKnown RBP6.71□□□□□ -1.34
LCN2-205ENST00000487719 C12orf74Q32Q52 190 aa6.71□□□□□ -1.34
LCN2-205ENST00000487719 ZFP69Q49AA0 526 aa6.71□□□□□ -1.34
LCN2-205ENST00000487719 ZNF767PQ75MW2 155 aa6.71□□□□□ -1.34
LCN2-205ENST00000487719 ST6GAL2Q96JF0 529 aa6.71□□□□□ -1.34
LCN2-205ENST00000487719 FAM210BQ96KR6 192 aa6.71□□□□□ -1.34
LCN2-205ENST00000487719 VGLL1Q99990 258 aa6.71□□□□□ -1.34
LCN2-205ENST00000487719 NDUFAF3Q9BU61 184 aa6.71□□□□□ -1.34
LCN2-205ENST00000487719 MUC4Q99102 2169 aa6.71□□□□□ -1.34
LCN2-205ENST00000487719 IGHV4-4A0A075B6R2 117 aa6.7□□□□□ -1.34
LCN2-205ENST00000487719 MAP1LC3B2A6NCE7 125 aa6.7□□□□□ -1.34
LCN2-205ENST00000487719 KLLNB2CW77 178 aa6.7□□□□□ -1.34
LCN2-205ENST00000487719 TEX46H3BTG2 121 aa6.7□□□□□ -1.34
LCN2-205ENST00000487719 SEC11BP0C7V7 166 aa6.7□□□□□ -1.34
LCN2-205ENST00000487719 DEFB130BP0DP73 79 aa6.7□□□□□ -1.34
LCN2-205ENST00000487719 DEFB130AP0DP74 79 aa6.7□□□□□ -1.34
LCN2-205ENST00000487719 TPT1P13693 172 aaKnown RBP6.7□□□□□ -1.34
LCN2-205ENST00000487719 PPT1P50897 306 aa6.7□□□□□ -1.34
LCN2-205ENST00000487719 GOLT1AQ6ZVE7 132 aa6.7□□□□□ -1.34
LCN2-205ENST00000487719 AKAP14Q86UN6 197 aa6.7□□□□□ -1.34
LCN2-205ENST00000487719 EIF4E3Q8N5X7 224 aaKnown RBP6.7□□□□□ -1.34
LCN2-205ENST00000487719 LINC00476Q8WZB0 136 aa6.7□□□□□ -1.34
LCN2-205ENST00000487719 MAP1LC3BQ9GZQ8 125 aa6.7□□□□□ -1.34
LCN2-205ENST00000487719 KMT2CQ8NEZ4 4911 aaKnown RBP6.7□□□□□ -1.34
LCN2-205ENST00000487719 A0A1W2PRE2 83 aa6.69□□□□□ -1.34
LCN2-205ENST00000487719 F6UZH7 168 aa6.69□□□□□ -1.34
LCN2-205ENST00000487719 EIF3GO75821 320 aaKnown RBP eCLIP6.69□□□□□ -1.34
LCN2-205ENST00000487719 IFNA7P01567 189 aa6.69□□□□□ -1.34
LCN2-205ENST00000487719 ATP5G1P05496 136 aa6.69□□□□□ -1.34
LCN2-205ENST00000487719 ATP5G3P48201 142 aa6.69□□□□□ -1.34
LCN2-205ENST00000487719 BTN1A1Q13410 526 aa6.69□□□□□ -1.34
LCN2-205ENST00000487719 FAM159AQ6UWV7 190 aa6.69□□□□□ -1.34
LCN2-205ENST00000487719 DPPA3Q6W0C5 159 aa6.69□□□□□ -1.34
LCN2-205ENST00000487719 TMUB2Q71RG4 321 aa6.69□□□□□ -1.34
LCN2-205ENST00000487719 TCTE3Q8IZS6 198 aa6.69□□□□□ -1.34
LCN2-205ENST00000487719 Q8TAT8 98 aa6.69□□□□□ -1.34
LCN2-205ENST00000487719 RNASE8Q8TDE3 154 aaKnown RBP6.69□□□□□ -1.34
LCN2-205ENST00000487719 NOP10Q9NPE3 64 aaKnown RBP6.69□□□□□ -1.34
LCN2-205ENST00000487719 IGHV1OR15-1A0A075B7D0 117 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms