RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 POM121L12Q8N7R1 296 aa14.44□□□□□ -0.1
HDAC4-209ENST00000487617 CBY3A6NI87 242 aa14.43□□□□□ -0.1
HDAC4-209ENST00000487617 RANP62826 216 aaKnown RBP14.43□□□□□ -0.1
HDAC4-209ENST00000487617 FAM19A4Q96LR4 140 aa14.43□□□□□ -0.1
HDAC4-209ENST00000487617 VGLL1Q99990 258 aa14.43□□□□□ -0.1
HDAC4-209ENST00000487617 PYGO2Q9BRQ0 406 aa14.43□□□□□ -0.1
HDAC4-209ENST00000487617 KMT2AQ03164 3969 aa14.42□□□□□ -0.1
HDAC4-209ENST00000487617 KLLNB2CW77 178 aa14.42□□□□□ -0.1
HDAC4-209ENST00000487617 F5H768 121 aa14.42□□□□□ -0.1
HDAC4-209ENST00000487617 EIF3GO75821 320 aaKnown RBP eCLIP14.42□□□□□ -0.1
HDAC4-209ENST00000487617 ATP5G1P05496 136 aa14.42□□□□□ -0.1
HDAC4-209ENST00000487617 GIPP09681 153 aaPredicted RBP14.42□□□□□ -0.1
HDAC4-209ENST00000487617 M6PRP20645 277 aa14.42□□□□□ -0.1
HDAC4-209ENST00000487617 RNASE4P34096 147 aaKnown RBP14.42□□□□□ -0.1
HDAC4-209ENST00000487617 CSN1S1P47710 185 aa14.42□□□□□ -0.1
HDAC4-209ENST00000487617 ATP5G3P48201 142 aa14.42□□□□□ -0.1
HDAC4-209ENST00000487617 UBE2DNLQ8IWF7 75 aa14.42□□□□□ -0.1
HDAC4-209ENST00000487617 LYPD1Q8N2G4 141 aa14.42□□□□□ -0.1
HDAC4-209ENST00000487617 AQP10Q96PS8 301 aa14.42□□□□□ -0.1
HDAC4-209ENST00000487617 Q9H3A6 140 aa14.42□□□□□ -0.1
HDAC4-209ENST00000487617 A0A1W2PPV4 95 aa14.41□□□□□ -0.1
HDAC4-209ENST00000487617 GPX1P07203 203 aa14.41□□□□□ -0.1
HDAC4-209ENST00000487617 RAB2AP61019 212 aa14.41□□□□□ -0.1
HDAC4-209ENST00000487617 CD300CQ08708 224 aa14.41□□□□□ -0.1
HDAC4-209ENST00000487617 BTN1A1Q13410 526 aa14.41□□□□□ -0.1
HDAC4-209ENST00000487617 ZNF266Q14584 549 aa14.41□□□□□ -0.1
HDAC4-209ENST00000487617 Q5BKY6 102 aa14.41□□□□□ -0.1
HDAC4-209ENST00000487617 EPPK1P58107 5090 aaKnown RBP14.4□□□□□ -0.1
HDAC4-209ENST00000487617 SNURFLB1AK76 121 aa14.4□□□□□ -0.1
HDAC4-209ENST00000487617 CRISP2P16562 243 aa14.4□□□□□ -0.1
HDAC4-209ENST00000487617 RGS21Q2M5E4 152 aa14.4□□□□□ -0.1
HDAC4-209ENST00000487617 C15orf53Q8NAA6 179 aa14.4□□□□□ -0.1
HDAC4-209ENST00000487617 ASB13Q8WXK3 278 aa14.4□□□□□ -0.1
HDAC4-209ENST00000487617 ZNF492Q9P255 531 aa14.4□□□□□ -0.1
HDAC4-209ENST00000487617 ZNF324O75467 553 aaPredicted RBP14.39□□□□□ -0.11
HDAC4-209ENST00000487617 NMBP08949 121 aa14.39□□□□□ -0.11
HDAC4-209ENST00000487617 ZNF138P52744 262 aa14.39□□□□□ -0.11
HDAC4-209ENST00000487617 ZFAND2AQ8N6M9 145 aa14.39□□□□□ -0.11
HDAC4-209ENST00000487617 HSD17B11Q8NBQ5 300 aa14.39□□□□□ -0.11
HDAC4-209ENST00000487617 OR10G4Q8NGN3 311 aa14.39□□□□□ -0.11
HDAC4-209ENST00000487617 OR10G9Q8NGN4 311 aa14.39□□□□□ -0.11
HDAC4-209ENST00000487617 OR10G7Q8NGN6 311 aa14.39□□□□□ -0.11
HDAC4-209ENST00000487617 PQLC2Q6ZP29 291 aa14.38□□□□□ -0.11
HDAC4-209ENST00000487617 Q8TAT8 98 aa14.38□□□□□ -0.11
HDAC4-209ENST00000487617 GAGE12BA1L429 117 aa14.37□□□□□ -0.11
HDAC4-209ENST00000487617 RBAKDNA6NC62 111 aa14.37□□□□□ -0.11
HDAC4-209ENST00000487617 GAGE7O76087 117 aa14.37□□□□□ -0.11
HDAC4-209ENST00000487617 GAGE12FP0CL80 117 aa14.37□□□□□ -0.11
HDAC4-209ENST00000487617 GAGE12GP0CL81 117 aa14.37□□□□□ -0.11
HDAC4-209ENST00000487617 GAGE12IP0CL82 117 aa14.37□□□□□ -0.11
HDAC4-209ENST00000487617 PRR9Q5T870 116 aa14.37□□□□□ -0.11
HDAC4-209ENST00000487617 LINC00612Q8N6U2 182 aa14.37□□□□□ -0.11
HDAC4-209ENST00000487617 INO80EQ8NBZ0 244 aaPredicted RBP14.37□□□□□ -0.11
HDAC4-209ENST00000487617 RXFP4Q8TDU9 374 aa14.37□□□□□ -0.11
HDAC4-209ENST00000487617 HYLS1Q96M11 299 aa14.37□□□□□ -0.11
HDAC4-209ENST00000487617 LINC00467Q9BRT7 94 aa14.37□□□□□ -0.11
HDAC4-209ENST00000487617 OTORQ9NRC9 128 aa14.37□□□□□ -0.11
HDAC4-209ENST00000487617 VPS13DQ5THJ4 4388 aa14.36□□□□□ -0.11
HDAC4-209ENST00000487617 FXYD6-FXYD2A0A087WZ82 144 aa14.36□□□□□ -0.11
HDAC4-209ENST00000487617 DIRC3C9JPN6 131 aa14.36□□□□□ -0.11
HDAC4-209ENST00000487617 HMGB3O15347 200 aaKnown RBP14.36□□□□□ -0.11
HDAC4-209ENST00000487617 DAZ2Q13117 558 aaKnown RBP14.36□□□□□ -0.11
HDAC4-209ENST00000487617 EIF4E3Q8N5X7 224 aaKnown RBP14.36□□□□□ -0.11
HDAC4-209ENST00000487617 ZNF680Q8NEM1 530 aa14.36□□□□□ -0.11
HDAC4-209ENST00000487617 OR2G3Q8NGZ4 309 aa14.36□□□□□ -0.11
HDAC4-209ENST00000487617 TRBV7-9A0A0J9YWB2 115 aa14.35□□□□□ -0.11
HDAC4-209ENST00000487617 PGPA6NDG6 321 aa14.35□□□□□ -0.11
HDAC4-209ENST00000487617 RGS13O14921 159 aa14.35□□□□□ -0.11
HDAC4-209ENST00000487617 NUDT3O95989 172 aa14.35□□□□□ -0.11
HDAC4-209ENST00000487617 ATP6V0CP27449 155 aa14.35□□□□□ -0.11
HDAC4-209ENST00000487617 ANXA2RQ3ZCQ2 193 aa14.35□□□□□ -0.11
HDAC4-209ENST00000487617 RNF212Q495C1 297 aa14.35□□□□□ -0.11
HDAC4-209ENST00000487617 FAM74A1Q5RGS3 127 aa14.35□□□□□ -0.11
HDAC4-209ENST00000487617 OR2T35Q8NGX2 323 aa14.35□□□□□ -0.11
HDAC4-209ENST00000487617 CMTM2Q8TAZ6 248 aa14.35□□□□□ -0.11
HDAC4-209ENST00000487617 PSMG3Q9BT73 122 aaPredicted RBP14.35□□□□□ -0.11
HDAC4-209ENST00000487617 GSN-AS1Q9NRJ2 163 aa14.35□□□□□ -0.11
HDAC4-209ENST00000487617 M0R2N4 97 aa14.34□□□□□ -0.11
HDAC4-209ENST00000487617 CDC34P49427 236 aaPredicted RBP14.34□□□□□ -0.11
HDAC4-209ENST00000487617 RPH3ALQ9UNE2 315 aa14.34□□□□□ -0.11
HDAC4-209ENST00000487617 ARL14EPLP0DKL9 152 aa14.33□□□□□ -0.12
HDAC4-209ENST00000487617 OR5I1Q13606 314 aa14.33□□□□□ -0.12
HDAC4-209ENST00000487617 Q6ZQT7 251 aa14.33□□□□□ -0.12
HDAC4-209ENST00000487617 Q6ZTI0 123 aa14.33□□□□□ -0.12
HDAC4-209ENST00000487617 C11orf72Q8NBR9 251 aa14.33□□□□□ -0.12
HDAC4-209ENST00000487617 ATG101Q9BSB4 218 aa14.33□□□□□ -0.12
HDAC4-209ENST00000487617 IGLV2-18A0A075B6J9 118 aa14.32□□□□□ -0.12
HDAC4-209ENST00000487617 IGHV1OR15-1A0A075B7D0 117 aa14.32□□□□□ -0.12
HDAC4-209ENST00000487617 RNF222A6NCQ9 220 aa14.32□□□□□ -0.12
HDAC4-209ENST00000487617 MBP02144 154 aa14.32□□□□□ -0.12
HDAC4-209ENST00000487617 SERF2P84101 59 aa14.32□□□□□ -0.12
HDAC4-209ENST00000487617 RAB24Q969Q5 203 aa14.32□□□□□ -0.12
HDAC4-209ENST00000487617 SH3BGRL3Q9H299 93 aa14.32□□□□□ -0.12
HDAC4-209ENST00000487617 TNFSF18Q9UNG2 199 aa14.32□□□□□ -0.12
HDAC4-209ENST00000487617 RPL7L1Q6DKI1 246 aaKnown RBP14.31□□□□□ -0.12
HDAC4-209ENST00000487617 ARPC5LQ9BPX5 153 aa14.31□□□□□ -0.12
HDAC4-209ENST00000487617 TP53TG3Q9ULZ0 132 aa14.31□□□□□ -0.12
HDAC4-209ENST00000487617 KLF12Q9Y4X4 402 aa14.31□□□□□ -0.12
HDAC4-209ENST00000487617 LENEPQ9Y5L5 61 aa14.31□□□□□ -0.12
HDAC4-209ENST00000487617 BIRC6Q9NR09 4857 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms