RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 DAZ2Q13117 558 aaKnown RBP8.46□□□□□ -1.06
VPS16-208ENST00000487461 ESRGQ1W209 222 aa8.46□□□□□ -1.06
VPS16-208ENST00000487461 TMEM252Q8N6L7 170 aa8.46□□□□□ -1.06
VPS16-208ENST00000487461 ZNF503Q96F45 646 aa8.46□□□□□ -1.06
VPS16-208ENST00000487461 MED28Q9H204 178 aa8.46□□□□□ -1.06
VPS16-208ENST00000487461 LYRM2Q9NU23 88 aaPredicted RBP8.46□□□□□ -1.06
VPS16-208ENST00000487461 NUDT15Q9NV35 164 aa8.46□□□□□ -1.06
VPS16-208ENST00000487461 ABCA13Q86UQ4 5058 aa8.45□□□□□ -1.06
VPS16-208ENST00000487461 TRBV19A0A075B6N1 114 aa8.45□□□□□ -1.06
VPS16-208ENST00000487461 UBE2L5PA0A1B0GUS4 154 aa8.45□□□□□ -1.06
VPS16-208ENST00000487461 M0R3E3 92 aa8.45□□□□□ -1.06
VPS16-208ENST00000487461 ZNF253O75346 499 aa8.45□□□□□ -1.06
VPS16-208ENST00000487461 NDUFB4O95168 129 aa8.45□□□□□ -1.06
VPS16-208ENST00000487461 PVALBP20472 110 aaPredicted RBP8.45□□□□□ -1.06
VPS16-208ENST00000487461 S100A10P60903 97 aa8.45□□□□□ -1.06
VPS16-208ENST00000487461 BAXQ07812 192 aa8.45□□□□□ -1.06
VPS16-208ENST00000487461 RAB32Q13637 225 aa8.45□□□□□ -1.06
VPS16-208ENST00000487461 Q6ZTI0 123 aa8.45□□□□□ -1.06
VPS16-208ENST00000487461 PFDN5Q99471 154 aa8.45□□□□□ -1.06
VPS16-208ENST00000487461 PYGO2Q9BRQ0 406 aa8.45□□□□□ -1.06
VPS16-208ENST00000487461 KRTAP1-5Q9BYS1 174 aa8.45□□□□□ -1.06
VPS16-208ENST00000487461 TMEM14CQ9P0S9 112 aa8.45□□□□□ -1.06
VPS16-208ENST00000487461 H3BNG1 76 aa8.44□□□□□ -1.06
VPS16-208ENST00000487461 ZNF324O75467 553 aaPredicted RBP8.44□□□□□ -1.06
VPS16-208ENST00000487461 SLC25A5P05141 298 aaKnown RBP8.44□□□□□ -1.06
VPS16-208ENST00000487461 HIST1H1EP10412 219 aaKnown RBP8.44□□□□□ -1.06
VPS16-208ENST00000487461 GCSAMLQ5JQS6 135 aa8.44□□□□□ -1.06
VPS16-208ENST00000487461 MRPL53Q96EL3 112 aaKnown RBP8.44□□□□□ -1.06
VPS16-208ENST00000487461 FAM19A4Q96LR4 140 aa8.44□□□□□ -1.06
VPS16-208ENST00000487461 LINC00477Q96M19 166 aa8.44□□□□□ -1.06
VPS16-208ENST00000487461 AGPAT4-IT1Q9H0P7 198 aa8.44□□□□□ -1.06
VPS16-208ENST00000487461 TMPRSS5Q9H3S3 457 aa8.44□□□□□ -1.06
VPS16-208ENST00000487461 GSN-AS1Q9NRJ2 163 aa8.44□□□□□ -1.06
VPS16-208ENST00000487461 C7orf71A4D174 169 aa8.43□□□□□ -1.06
VPS16-208ENST00000487461 KLLNB2CW77 178 aa8.43□□□□□ -1.06
VPS16-208ENST00000487461 PYYP10082 97 aa8.43□□□□□ -1.06
VPS16-208ENST00000487461 FGF7P21781 194 aa8.43□□□□□ -1.06
VPS16-208ENST00000487461 RNASE4P34096 147 aaKnown RBP8.43□□□□□ -1.06
VPS16-208ENST00000487461 HBG1P69891 147 aa8.43□□□□□ -1.06
VPS16-208ENST00000487461 HBG2P69892 147 aa8.43□□□□□ -1.06
VPS16-208ENST00000487461 ATP6V1FQ16864 119 aa8.43□□□□□ -1.06
VPS16-208ENST00000487461 SLC7A5P1Q8MH63 180 aa8.43□□□□□ -1.06
VPS16-208ENST00000487461 EXOC3-AS1Q8N2X6 119 aa8.43□□□□□ -1.06
VPS16-208ENST00000487461 C11orf72Q8NBR9 251 aa8.43□□□□□ -1.06
VPS16-208ENST00000487461 VSIG2Q96IQ7 327 aa8.43□□□□□ -1.06
VPS16-208ENST00000487461 UPK3BQ9BT76 320 aa8.43□□□□□ -1.06
VPS16-208ENST00000487461 PRELID1Q9Y255 219 aa8.43□□□□□ -1.06
VPS16-208ENST00000487461 TIMM9Q9Y5J7 89 aa8.43□□□□□ -1.06
VPS16-208ENST00000487461 LRP1BQ9NZR2 4599 aa8.43□□□□□ -1.06
VPS16-208ENST00000487461 HSPG2P98160 4391 aa8.42□□□□□ -1.06
VPS16-208ENST00000487461 CDK2AP2O75956 126 aa8.42□□□□□ -1.06
VPS16-208ENST00000487461 BTN1A1Q13410 526 aa8.42□□□□□ -1.06
VPS16-208ENST00000487461 Q5BKY6 102 aa8.42□□□□□ -1.06
VPS16-208ENST00000487461 STX12Q86Y82 276 aa8.42□□□□□ -1.06
VPS16-208ENST00000487461 BLNKQ8WV28 456 aa8.42□□□□□ -1.06
VPS16-208ENST00000487461 LINC00467Q9BRT7 94 aa8.42□□□□□ -1.06
VPS16-208ENST00000487461 SLC25A2Q9BXI2 301 aa8.42□□□□□ -1.06
VPS16-208ENST00000487461 Q9H3A6 140 aa8.42□□□□□ -1.06
VPS16-208ENST00000487461 GPN1Q9HCN4 374 aaPredicted RBP8.42□□□□□ -1.06
VPS16-208ENST00000487461 MRPS16Q9Y3D3 137 aaKnown RBP8.42□□□□□ -1.06
VPS16-208ENST00000487461 TRGV2A0A075B6R0 118 aa8.41□□□□□ -1.06
VPS16-208ENST00000487461 NHLH2Q02577 135 aa8.41□□□□□ -1.06
VPS16-208ENST00000487461 PDE6HQ13956 83 aa8.41□□□□□ -1.06
VPS16-208ENST00000487461 ANXA2RQ3ZCQ2 193 aa8.41□□□□□ -1.06
VPS16-208ENST00000487461 Q6ZQT7 251 aa8.41□□□□□ -1.06
VPS16-208ENST00000487461 C9orf47Q6ZRZ4 202 aa8.41□□□□□ -1.06
VPS16-208ENST00000487461 SPATA12Q7Z6I5 190 aa8.41□□□□□ -1.06
VPS16-208ENST00000487461 EIF4E3Q8N5X7 224 aaKnown RBP8.41□□□□□ -1.06
VPS16-208ENST00000487461 ASB13Q8WXK3 278 aa8.41□□□□□ -1.06
VPS16-208ENST00000487461 FAM167A-AS1Q96KT0 104 aa8.41□□□□□ -1.06
VPS16-208ENST00000487461 C18orf15Q96N68 181 aa8.41□□□□□ -1.06
VPS16-208ENST00000487461 NPCDR1Q9BY65 106 aa8.41□□□□□ -1.06
VPS16-208ENST00000487461 KLF12Q9Y4X4 402 aa8.41□□□□□ -1.06
VPS16-208ENST00000487461 IGKV2-40A0A087WW87 121 aaPredicted RBP8.4□□□□□ -1.06
VPS16-208ENST00000487461 A0A096LPF7 62 aa8.4□□□□□ -1.06
VPS16-208ENST00000487461 TRGV1A0A0A0MS02 117 aa8.4□□□□□ -1.06
VPS16-208ENST00000487461 A0A1W2PPQ1 181 aa8.4□□□□□ -1.06
VPS16-208ENST00000487461 SPINK4O60575 86 aa8.4□□□□□ -1.06
VPS16-208ENST00000487461 MPDU1O75352 247 aa8.4□□□□□ -1.06
VPS16-208ENST00000487461 SIX6O95475 246 aa8.4□□□□□ -1.06
VPS16-208ENST00000487461 IGKV2D-40P01614 121 aaPredicted RBP8.4□□□□□ -1.06
VPS16-208ENST00000487461 GPX1P07203 203 aa8.4□□□□□ -1.06
VPS16-208ENST00000487461 NBEAP1P0C6P0 100 aa8.4□□□□□ -1.06
VPS16-208ENST00000487461 CRISP2P16562 243 aa8.4□□□□□ -1.06
VPS16-208ENST00000487461 ICAM4Q14773 271 aa8.4□□□□□ -1.06
VPS16-208ENST00000487461 TTC32Q5I0X7 151 aa8.4□□□□□ -1.06
VPS16-208ENST00000487461 MIR17HGQ75NE6 70 aa8.4□□□□□ -1.06
VPS16-208ENST00000487461 C9orf62Q8N4C0 152 aa8.4□□□□□ -1.06
VPS16-208ENST00000487461 ZFAND2AQ8N6M9 145 aa8.4□□□□□ -1.06
VPS16-208ENST00000487461 ZNF680Q8NEM1 530 aa8.4□□□□□ -1.06
VPS16-208ENST00000487461 THAP6Q8TBB0 222 aa8.4□□□□□ -1.06
VPS16-208ENST00000487461 VGLL1Q99990 258 aa8.4□□□□□ -1.06
VPS16-208ENST00000487461 TP53TG3Q9ULZ0 132 aa8.4□□□□□ -1.06
VPS16-208ENST00000487461 FUT9Q9Y231 359 aa8.4□□□□□ -1.06
VPS16-208ENST00000487461 BOLA1Q9Y3E2 137 aa8.4□□□□□ -1.06
VPS16-208ENST00000487461 KRTAP10-2P60368 255 aa8.39□□□□□ -1.07
VPS16-208ENST00000487461 PRR9Q5T870 116 aa8.39□□□□□ -1.07
VPS16-208ENST00000487461 FAM122CQ6P4D5 195 aa8.39□□□□□ -1.07
VPS16-208ENST00000487461 MAPKAPK5-AS1Q8N8E1 139 aa8.39□□□□□ -1.07
VPS16-208ENST00000487461 OR5C1Q8NGR4 320 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 440.9 ms