RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 ERCC8Q13216 396 aa7.36□□□□□ -1.23
NEK4-204ENST00000487068 FAM74A1Q5RGS3 127 aa7.36□□□□□ -1.23
NEK4-204ENST00000487068 PQLC2Q6ZP29 291 aa7.36□□□□□ -1.23
NEK4-204ENST00000487068 Q6ZTC4 211 aa7.36□□□□□ -1.23
NEK4-204ENST00000487068 TMEM256Q8N2U0 113 aa7.36□□□□□ -1.23
NEK4-204ENST00000487068 OR2G3Q8NGZ4 309 aa7.36□□□□□ -1.23
NEK4-204ENST00000487068 CMTM2Q8TAZ6 248 aa7.36□□□□□ -1.23
NEK4-204ENST00000487068 GNPNAT1Q96EK6 184 aaPredicted RBP7.36□□□□□ -1.23
NEK4-204ENST00000487068 HYLS1Q96M11 299 aa7.36□□□□□ -1.23
NEK4-204ENST00000487068 LINC01587Q99440 93 aa7.36□□□□□ -1.23
NEK4-204ENST00000487068 Q9H3A6 140 aa7.36□□□□□ -1.23
NEK4-204ENST00000487068 CSMD3Q7Z407 3707 aa7.35□□□□□ -1.23
NEK4-204ENST00000487068 C11orf94C9JXX5 98 aa7.35□□□□□ -1.23
NEK4-204ENST00000487068 CRXO43186 299 aaPredicted RBP7.35□□□□□ -1.23
NEK4-204ENST00000487068 SPART-AS1P0CW21 52 aa7.35□□□□□ -1.23
NEK4-204ENST00000487068 ARL14EPLP0DKL9 152 aa7.35□□□□□ -1.23
NEK4-204ENST00000487068 SERF2P84101 59 aa7.35□□□□□ -1.23
NEK4-204ENST00000487068 AKR1C8PQ5T2L2 129 aa7.35□□□□□ -1.23
NEK4-204ENST00000487068 FAM222AQ5U5X8 452 aa7.35□□□□□ -1.23
NEK4-204ENST00000487068 C2CD4CQ8TF44 421 aa7.35□□□□□ -1.23
NEK4-204ENST00000487068 NIPSNAP3BQ9BS92 247 aa7.35□□□□□ -1.23
NEK4-204ENST00000487068 YTHDF2Q9Y5A9 579 aaKnown RBP7.35□□□□□ -1.23
NEK4-204ENST00000487068 TRAV10A0A0B4J240 114 aa7.34□□□□□ -1.23
NEK4-204ENST00000487068 TRAV12-3A0A0B4J271 114 aa7.34□□□□□ -1.23
NEK4-204ENST00000487068 IGLL5B9A064 214 aa7.34□□□□□ -1.23
NEK4-204ENST00000487068 G3V3Q6 166 aa7.34□□□□□ -1.23
NEK4-204ENST00000487068 TAAR5O14804 337 aa7.34□□□□□ -1.23
NEK4-204ENST00000487068 PFDN1O60925 122 aa7.34□□□□□ -1.23
NEK4-204ENST00000487068 HTN3P15516 51 aa7.34□□□□□ -1.23
NEK4-204ENST00000487068 GFI1BQ5VTD9 330 aa7.34□□□□□ -1.23
NEK4-204ENST00000487068 RAB24Q969Q5 203 aa7.34□□□□□ -1.23
NEK4-204ENST00000487068 ZNF503Q96F45 646 aa7.34□□□□□ -1.23
NEK4-204ENST00000487068 ODF3Q96PU9 254 aa7.34□□□□□ -1.23
NEK4-204ENST00000487068 ARPC5LQ9BPX5 153 aa7.34□□□□□ -1.23
NEK4-204ENST00000487068 ACTR3CQ9C0K3 210 aaPredicted RBP7.34□□□□□ -1.23
NEK4-204ENST00000487068 HYDINQ4G0P3 5121 aa7.33□□□□□ -1.24
NEK4-204ENST00000487068 DEFB131BA0A096LNP1 70 aa7.33□□□□□ -1.24
NEK4-204ENST00000487068 KANTRA0A1W2PQU2 76 aa7.33□□□□□ -1.24
NEK4-204ENST00000487068 H7BYZ3 331 aa7.33□□□□□ -1.24
NEK4-204ENST00000487068 LY6G6CO95867 125 aa7.33□□□□□ -1.24
NEK4-204ENST00000487068 PRM2P04554 102 aa7.33□□□□□ -1.24
NEK4-204ENST00000487068 GPX1P07203 203 aa7.33□□□□□ -1.24
NEK4-204ENST00000487068 CT45A10P0DMU9 189 aa7.33□□□□□ -1.24
NEK4-204ENST00000487068 TAS2R60P59551 318 aa7.33□□□□□ -1.24
NEK4-204ENST00000487068 DAD1P61803 113 aa7.33□□□□□ -1.24
NEK4-204ENST00000487068 KIR3DS1Q14943 382 aa7.33□□□□□ -1.24
NEK4-204ENST00000487068 CCDC28AQ8IWP9 274 aa7.33□□□□□ -1.24
NEK4-204ENST00000487068 LYPD1Q8N2G4 141 aa7.33□□□□□ -1.24
NEK4-204ENST00000487068 Q8TAT8 98 aa7.33□□□□□ -1.24
NEK4-204ENST00000487068 RXFP4Q8TDU9 374 aa7.33□□□□□ -1.24
NEK4-204ENST00000487068 C16orf74Q96GX8 76 aa7.33□□□□□ -1.24
NEK4-204ENST00000487068 LINC00477Q96M19 166 aa7.33□□□□□ -1.24
NEK4-204ENST00000487068 C20orf144Q9BQM9 153 aa7.33□□□□□ -1.24
NEK4-204ENST00000487068 OTORQ9NRC9 128 aa7.33□□□□□ -1.24
NEK4-204ENST00000487068 C7orf71A4D174 169 aa7.32□□□□□ -1.24
NEK4-204ENST00000487068 PGPA6NDG6 321 aa7.32□□□□□ -1.24
NEK4-204ENST00000487068 CXorf1O96002 111 aa7.32□□□□□ -1.24
NEK4-204ENST00000487068 SLC25A5P05141 298 aaKnown RBP7.32□□□□□ -1.24
NEK4-204ENST00000487068 BTN1A1Q13410 526 aa7.32□□□□□ -1.24
NEK4-204ENST00000487068 ZNF345Q14585 488 aa7.32□□□□□ -1.24
NEK4-204ENST00000487068 CDPF1Q6NVV7 123 aa7.32□□□□□ -1.24
NEK4-204ENST00000487068 VGLL1Q99990 258 aa7.32□□□□□ -1.24
NEK4-204ENST00000487068 ZNF471Q9BX82 626 aaPredicted RBP7.32□□□□□ -1.24
NEK4-204ENST00000487068 AGPAT4-IT1Q9H0P7 198 aa7.32□□□□□ -1.24
NEK4-204ENST00000487068 DKK2Q9UBU2 259 aa7.32□□□□□ -1.24
NEK4-204ENST00000487068 A0A0D9SG52 128 aa7.31□□□□□ -1.24
NEK4-204ENST00000487068 CTXND1A0A1B0GTU2 59 aa7.31□□□□□ -1.24
NEK4-204ENST00000487068 SNURFLB1AK76 121 aa7.31□□□□□ -1.24
NEK4-204ENST00000487068 FAM229AH3BQW9 127 aa7.31□□□□□ -1.24
NEK4-204ENST00000487068 STAG3L2P0CL84 134 aa7.31□□□□□ -1.24
NEK4-204ENST00000487068 STAG3L3P0CL85 134 aa7.31□□□□□ -1.24
NEK4-204ENST00000487068 DEFB130BP0DP73 79 aa7.31□□□□□ -1.24
NEK4-204ENST00000487068 DEFB130AP0DP74 79 aa7.31□□□□□ -1.24
NEK4-204ENST00000487068 AZU1P20160 251 aa7.31□□□□□ -1.24
NEK4-204ENST00000487068 GCHFRP30047 84 aa7.31□□□□□ -1.24
NEK4-204ENST00000487068 RNASE4P34096 147 aaKnown RBP7.31□□□□□ -1.24
NEK4-204ENST00000487068 ZNF138P52744 262 aa7.31□□□□□ -1.24
NEK4-204ENST00000487068 C12orf74Q32Q52 190 aa7.31□□□□□ -1.24
NEK4-204ENST00000487068 C9orf47Q6ZRZ4 202 aa7.31□□□□□ -1.24
NEK4-204ENST00000487068 GOLT1AQ6ZVE7 132 aa7.31□□□□□ -1.24
NEK4-204ENST00000487068 KCNRGQ8N5I3 272 aa7.31□□□□□ -1.24
NEK4-204ENST00000487068 TMEM263Q8WUH6 116 aaKnown RBP7.31□□□□□ -1.24
NEK4-204ENST00000487068 TMEM167BQ9NRX6 74 aa7.31□□□□□ -1.24
NEK4-204ENST00000487068 IGHV4-4A0A075B6R2 117 aa7.3□□□□□ -1.24
NEK4-204ENST00000487068 RBAKDNA6NC62 111 aa7.3□□□□□ -1.24
NEK4-204ENST00000487068 CBY3A6NI87 242 aa7.3□□□□□ -1.24
NEK4-204ENST00000487068 DIRC3C9JPN6 131 aa7.3□□□□□ -1.24
NEK4-204ENST00000487068 K7EQM0 130 aa7.3□□□□□ -1.24
NEK4-204ENST00000487068 BCL2L11O43521 198 aa7.3□□□□□ -1.24
NEK4-204ENST00000487068 FGF8P55075 233 aaPredicted RBP7.3□□□□□ -1.24
NEK4-204ENST00000487068 GNG5P63218 68 aa7.3□□□□□ -1.24
NEK4-204ENST00000487068 CD300CQ08708 224 aa7.3□□□□□ -1.24
NEK4-204ENST00000487068 SSX7Q7RTT5 188 aa7.3□□□□□ -1.24
NEK4-204ENST00000487068 LINC00476Q8WZB0 136 aa7.3□□□□□ -1.24
NEK4-204ENST00000487068 PYGO2Q9BRQ0 406 aa7.3□□□□□ -1.24
NEK4-204ENST00000487068 NDFIP1Q9BT67 221 aa7.3□□□□□ -1.24
NEK4-204ENST00000487068 ZNF492Q9P255 531 aa7.3□□□□□ -1.24
NEK4-204ENST00000487068 TIMM8BQ9Y5J9 83 aaPredicted RBP7.3□□□□□ -1.24
NEK4-204ENST00000487068 MAP1LC3B2A6NCE7 125 aa7.29□□□□□ -1.24
NEK4-204ENST00000487068 LYRM9A8MSI8 78 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms