RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 Q8N976 141 aa2.66□□□□□ -1.98
PTCD3-216ENST00000487043 C11orf72Q8NBR9 251 aa2.66□□□□□ -1.98
PTCD3-216ENST00000487043 OR2T10Q8NGZ9 312 aa2.66□□□□□ -1.98
PTCD3-216ENST00000487043 RBMXL1Q96E39 390 aaKnown RBP2.66□□□□□ -1.98
PTCD3-216ENST00000487043 SMIM8Q96KF7 97 aa2.66□□□□□ -1.98
PTCD3-216ENST00000487043 LINC00052Q96N35 136 aa2.66□□□□□ -1.98
PTCD3-216ENST00000487043 CIB3Q96Q77 187 aaPredicted RBP2.66□□□□□ -1.98
PTCD3-216ENST00000487043 TSNAXQ99598 290 aaKnown RBP2.66□□□□□ -1.98
PTCD3-216ENST00000487043 C11orf1Q9H5F2 150 aa2.66□□□□□ -1.98
PTCD3-216ENST00000487043 ZNF331Q9NQX6 463 aaPredicted RBP2.66□□□□□ -1.98
PTCD3-216ENST00000487043 LYRM2Q9NU23 88 aaPredicted RBP2.66□□□□□ -1.98
PTCD3-216ENST00000487043 TMEM14BQ9NUH8 114 aa2.66□□□□□ -1.98
PTCD3-216ENST00000487043 FKBP11Q9NYL4 201 aa2.66□□□□□ -1.98
PTCD3-216ENST00000487043 OR5AC2Q9NZP5 309 aa2.66□□□□□ -1.98
PTCD3-216ENST00000487043 PRNDQ9UKY0 176 aa2.66□□□□□ -1.98
PTCD3-216ENST00000487043 ZNF257Q9Y2Q1 563 aa2.66□□□□□ -1.98
PTCD3-216ENST00000487043 SIGLEC9Q9Y336 463 aa2.66□□□□□ -1.98
PTCD3-216ENST00000487043 LSM5Q9Y4Y9 91 aaKnown RBP2.66□□□□□ -1.98
PTCD3-216ENST00000487043 WSB1Q9Y6I7 421 aa2.66□□□□□ -1.98
PTCD3-216ENST00000487043 CR1P17927 2039 aa2.66□□□□□ -1.98
PTCD3-216ENST00000487043 TEX15Q9BXT5 2789 aa2.66□□□□□ -1.98
PTCD3-216ENST00000487043 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.65□□□□□ -1.984e-7■■■■■ 37.1
PTCD3-216ENST00000487043 TET2Q6N021 2002 aaPredicted RBP2.65□□□□□ -1.99
PTCD3-216ENST00000487043 ITPR3Q14573 2671 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 SMIM26A0A096LP01 95 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 TRAV40A0A0B4J280 105 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 IGHV3-66A0A0C4DH42 116 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 FAM24AA6NFZ4 105 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 CEBPZOSA8MTT3 80 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 C1orf196B1AJZ1 125 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 H0Y9J4 135 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 TAAR5O14804 337 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 SSSCA1O60232 199 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 IFNA17P01571 189 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 NMBP08949 121 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 FBP1P09467 338 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 CD24P25063 80 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 PAX6P26367 422 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 CNTFRP26992 372 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 RPL35P42766 123 aaKnown RBP2.65□□□□□ -1.99
PTCD3-216ENST00000487043 SULT1A1P50225 295 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 OR2B8PP59922 312 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 PRCDQ00LT1 54 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 DEFA5Q01523 94 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 BAXQ07812 192 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 HES1Q14469 280 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 PRSS8Q16651 343 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 C2orf83Q53S99 150 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 BRD3OSQ6XYD6 125 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 OR10W1Q8NGF6 305 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 OR1L8Q8NGR8 309 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 PIFOQ8TCI5 191 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 DTD1Q8TEA8 209 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 CACNG8Q8WXS5 425 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 NARS2Q96I59 477 aaKnown RBP2.65□□□□□ -1.99
PTCD3-216ENST00000487043 AQP10Q96PS8 301 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 CHAC1Q9BUX1 264 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 HINT2Q9BX68 163 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 COMMD5Q9GZQ3 224 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 SLC25A31Q9H0C2 315 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 ZNF430Q9H8G1 570 aaPredicted RBP2.65□□□□□ -1.99
PTCD3-216ENST00000487043 NDUFA4L2Q9NRX3 87 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 PSENENQ9NZ42 101 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 METTL1Q9UBP6 276 aaKnown RBP2.65□□□□□ -1.99
PTCD3-216ENST00000487043 OR51B2Q9Y5P1 312 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 CSMD2Q7Z408 3487 aa2.65□□□□□ -1.99
PTCD3-216ENST00000487043 CCDC168Q8NDH2 2452 aa2.64□□□□□ -1.99
PTCD3-216ENST00000487043 ZANQ9Y493 2812 aa2.64□□□□□ -1.99
PTCD3-216ENST00000487043 A0A0J9YXV3 536 aa2.64□□□□□ -1.99
PTCD3-216ENST00000487043 KANTRA0A1W2PQU2 76 aa2.64□□□□□ -1.99
PTCD3-216ENST00000487043 IGSF23A1L1A6 192 aa2.64□□□□□ -1.99
PTCD3-216ENST00000487043 TMEM218A2RU14 115 aa2.64□□□□□ -1.99
PTCD3-216ENST00000487043 E7EUB6 86 aa2.64□□□□□ -1.99
PTCD3-216ENST00000487043 FGF16O43320 207 aa2.64□□□□□ -1.99
PTCD3-216ENST00000487043 CST7O76096 145 aa2.64□□□□□ -1.99
PTCD3-216ENST00000487043 CFDP00746 253 aaPredicted RBP2.64□□□□□ -1.99
PTCD3-216ENST00000487043 IFNA10P01566 189 aa2.64□□□□□ -1.99
PTCD3-216ENST00000487043 TLX1NBP0CAT3 122 aa2.64□□□□□ -1.99
PTCD3-216ENST00000487043 IAPPP10997 89 aa2.64□□□□□ -1.99
PTCD3-216ENST00000487043 EIF5AP63241 154 aaKnown RBP2.64□□□□□ -1.99
PTCD3-216ENST00000487043 ERHP84090 104 aaKnown RBP2.64□□□□□ -1.99
PTCD3-216ENST00000487043 PEA15Q15121 130 aa2.64□□□□□ -1.99
PTCD3-216ENST00000487043 MMDQ15546 238 aa2.64□□□□□ -1.99
PTCD3-216ENST00000487043 TNXAQ16473 311 aa2.64□□□□□ -1.99
PTCD3-216ENST00000487043 ATP6V1FQ16864 119 aa2.64□□□□□ -1.99
PTCD3-216ENST00000487043 LRRC75BQ2VPJ9 315 aa2.64□□□□□ -1.99
PTCD3-216ENST00000487043 DEFB112Q30KQ8 113 aa2.64□□□□□ -1.99
PTCD3-216ENST00000487043 BSXQ3C1V8 233 aa2.64□□□□□ -1.99
PTCD3-216ENST00000487043 SPINK9Q5DT21 86 aa2.64□□□□□ -1.99
PTCD3-216ENST00000487043 SPANXN5Q5MJ07 72 aa2.64□□□□□ -1.99
PTCD3-216ENST00000487043 EIF5AL1Q6IS14 154 aaKnown RBP2.64□□□□□ -1.99
PTCD3-216ENST00000487043 TMEM14EPQ6UXP3 125 aa2.64□□□□□ -1.99
PTCD3-216ENST00000487043 SPNS3Q6ZMD2 512 aa2.64□□□□□ -1.99
PTCD3-216ENST00000487043 SFT2D1Q8WV19 159 aa2.64□□□□□ -1.99
PTCD3-216ENST00000487043 TIMM17AQ99595 171 aa2.64□□□□□ -1.99
PTCD3-216ENST00000487043 ARL6Q9H0F7 186 aa2.64□□□□□ -1.99
PTCD3-216ENST00000487043 FBXL15Q9H469 300 aa2.64□□□□□ -1.99
PTCD3-216ENST00000487043 ENY2Q9NPA8 101 aa2.64□□□□□ -1.99
PTCD3-216ENST00000487043 CYTL1Q9NRR1 136 aa2.64□□□□□ -1.99
PTCD3-216ENST00000487043 CBY1Q9Y3M2 126 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms