RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 RXFP4Q8TDU9 374 aa9.43□□□□□ -0.9
SF1-216ENST00000486867 TMED6Q8WW62 240 aa9.43□□□□□ -0.9
SF1-216ENST00000486867 LYSTQ99698 3801 aa9.43□□□□□ -0.9
SF1-216ENST00000486867 VGLL1Q99990 258 aa9.43□□□□□ -0.9
SF1-216ENST00000486867 ZNF492Q9P255 531 aa9.43□□□□□ -0.9
SF1-216ENST00000486867 CELA1Q9UNI1 258 aa9.43□□□□□ -0.9
SF1-216ENST00000486867 LENEPQ9Y5L5 61 aa9.43□□□□□ -0.9
SF1-216ENST00000486867 IGHV3OR16-12A0A075B7B8 117 aa9.42□□□□□ -0.9
SF1-216ENST00000486867 LOC102723971A0A1B0GUV8 181 aa9.42□□□□□ -0.9
SF1-216ENST00000486867 PLAC8L1A1L4L8 177 aa9.42□□□□□ -0.9
SF1-216ENST00000486867 DIRC3C9JPN6 131 aa9.42□□□□□ -0.9
SF1-216ENST00000486867 CSN1S1P47710 185 aa9.42□□□□□ -0.9
SF1-216ENST00000486867 TAS2R60P59551 318 aa9.42□□□□□ -0.9
SF1-216ENST00000486867 NANOS2P60321 138 aaKnown RBP9.42□□□□□ -0.9
SF1-216ENST00000486867 TMUB2Q71RG4 321 aa9.42□□□□□ -0.9
SF1-216ENST00000486867 ZFAND2AQ8N6M9 145 aa9.42□□□□□ -0.9
SF1-216ENST00000486867 STOML3Q8TAV4 291 aa9.42□□□□□ -0.9
SF1-216ENST00000486867 PHLDA1Q8WV24 401 aaPredicted RBP9.42□□□□□ -0.9
SF1-216ENST00000486867 TMEM167BQ9NRX6 74 aa9.42□□□□□ -0.9
SF1-216ENST00000486867 PLA2G2EQ9NZK7 142 aa9.42□□□□□ -0.9
SF1-216ENST00000486867 TEX48A0A1B0GUV7 120 aa9.41□□□□□ -0.9
SF1-216ENST00000486867 KANTRA0A1W2PQU2 76 aa9.41□□□□□ -0.9
SF1-216ENST00000486867 PGPA6NDG6 321 aa9.41□□□□□ -0.9
SF1-216ENST00000486867 CXorf65A6NEN9 183 aa9.41□□□□□ -0.9
SF1-216ENST00000486867 UMAD1C9J7I0 102 aa9.41□□□□□ -0.9
SF1-216ENST00000486867 C11orf94C9JXX5 98 aa9.41□□□□□ -0.9
SF1-216ENST00000486867 H7BYZ3 331 aa9.41□□□□□ -0.9
SF1-216ENST00000486867 ZNF138P52744 262 aa9.41□□□□□ -0.9
SF1-216ENST00000486867 C12orf74Q32Q52 190 aa9.41□□□□□ -0.9
SF1-216ENST00000486867 LGALSLQ3ZCW2 172 aaPredicted RBP9.41□□□□□ -0.9
SF1-216ENST00000486867 FAM74A1Q5RGS3 127 aa9.41□□□□□ -0.9
SF1-216ENST00000486867 AKR1C8PQ5T2L2 129 aa9.41□□□□□ -0.9
SF1-216ENST00000486867 TMEM78Q5T7P6 136 aa9.41□□□□□ -0.9
SF1-216ENST00000486867 LINC00467Q9BRT7 94 aa9.41□□□□□ -0.9
SF1-216ENST00000486867 TMEM208Q9BTX3 173 aa9.41□□□□□ -0.9
SF1-216ENST00000486867 DKK2Q9UBU2 259 aa9.41□□□□□ -0.9
SF1-216ENST00000486867 A0A1W2PRE2 83 aa9.4□□□□□ -0.9
SF1-216ENST00000486867 C7orf71A4D174 169 aa9.4□□□□□ -0.9
SF1-216ENST00000486867 ZNF705GA8MUZ8 300 aaPredicted RBP9.4□□□□□ -0.9
SF1-216ENST00000486867 ZNF324O75467 553 aaPredicted RBP9.4□□□□□ -0.9
SF1-216ENST00000486867 SPART-AS1P0CW21 52 aa9.4□□□□□ -0.9
SF1-216ENST00000486867 EIF5AP63241 154 aaKnown RBP9.4□□□□□ -0.9
SF1-216ENST00000486867 PMS2P11Q13670 270 aa9.4□□□□□ -0.9
SF1-216ENST00000486867 ZNF493Q6ZR52 646 aa9.4□□□□□ -0.9
SF1-216ENST00000486867 RNASE8Q8TDE3 154 aaKnown RBP9.4□□□□□ -0.9
SF1-216ENST00000486867 HYLS1Q96M11 299 aa9.4□□□□□ -0.9
SF1-216ENST00000486867 ZNF471Q9BX82 626 aaPredicted RBP9.4□□□□□ -0.9
SF1-216ENST00000486867 LCE6AA0A183 80 aa9.39□□□□□ -0.91
SF1-216ENST00000486867 SERTM2A0A1B0GWG4 89 aa9.39□□□□□ -0.91
SF1-216ENST00000486867 GGTLC3B5MD39 225 aa9.39□□□□□ -0.91
SF1-216ENST00000486867 AZU1P20160 251 aa9.39□□□□□ -0.91
SF1-216ENST00000486867 PLECQ15149 4684 aaKnown RBP9.39□□□□□ -0.91
SF1-216ENST00000486867 AKAP14Q86UN6 197 aa9.39□□□□□ -0.91
SF1-216ENST00000486867 C5orf17Q8NAS9 161 aa9.39□□□□□ -0.91
SF1-216ENST00000486867 TMEM263Q8WUH6 116 aaKnown RBP9.39□□□□□ -0.91
SF1-216ENST00000486867 C16orf74Q96GX8 76 aa9.39□□□□□ -0.91
SF1-216ENST00000486867 LINC01587Q99440 93 aa9.39□□□□□ -0.91
SF1-216ENST00000486867 PYGO2Q9BRQ0 406 aa9.39□□□□□ -0.91
SF1-216ENST00000486867 YTHDF2Q9Y5A9 579 aaKnown RBP9.39□□□□□ -0.91
SF1-216ENST00000486867 LYRM9A8MSI8 78 aa9.38□□□□□ -0.91
SF1-216ENST00000486867 PRM2P04554 102 aa9.38□□□□□ -0.91
SF1-216ENST00000486867 TPT1P13693 172 aaKnown RBP9.38□□□□□ -0.91
SF1-216ENST00000486867 CD300CQ08708 224 aa9.38□□□□□ -0.91
SF1-216ENST00000486867 PRR9Q5T870 116 aa9.38□□□□□ -0.91
SF1-216ENST00000486867 FAM222AQ5U5X8 452 aa9.38□□□□□ -0.91
SF1-216ENST00000486867 DPPA3Q6W0C5 159 aa9.38□□□□□ -0.91
SF1-216ENST00000486867 Q6ZTC4 211 aa9.38□□□□□ -0.91
SF1-216ENST00000486867 MBD3L1Q8WWY6 194 aa9.38□□□□□ -0.91
SF1-216ENST00000486867 KLK5Q9Y337 293 aaPredicted RBP9.38□□□□□ -0.91
SF1-216ENST00000486867 ARL2-SNX15V9GYD0 113 aa9.38□□□□□ -0.91
SF1-216ENST00000486867 MUC4Q99102 2169 aa9.37□□□□□ -0.91
SF1-216ENST00000486867 TRAV10A0A0B4J240 114 aa9.37□□□□□ -0.91
SF1-216ENST00000486867 TRAV12-3A0A0B4J271 114 aa9.37□□□□□ -0.91
SF1-216ENST00000486867 MAP1LC3B2A6NCE7 125 aa9.37□□□□□ -0.91
SF1-216ENST00000486867 PFDN1O60925 122 aa9.37□□□□□ -0.91
SF1-216ENST00000486867 TCRAP04437 139 aa9.37□□□□□ -0.91
SF1-216ENST00000486867 TCTAP57738 103 aa9.37□□□□□ -0.91
SF1-216ENST00000486867 ANXA2RQ3ZCQ2 193 aa9.37□□□□□ -0.91
SF1-216ENST00000486867 Q8TAT8 98 aa9.37□□□□□ -0.91
SF1-216ENST00000486867 CMTM2Q8TAZ6 248 aa9.37□□□□□ -0.91
SF1-216ENST00000486867 NIPSNAP3BQ9BS92 247 aa9.37□□□□□ -0.91
SF1-216ENST00000486867 NKX6-2Q9C056 277 aaPredicted RBP9.37□□□□□ -0.91
SF1-216ENST00000486867 MAP1LC3BQ9GZQ8 125 aa9.37□□□□□ -0.91
SF1-216ENST00000486867 DNAH1Q9P2D7 4330 aa9.37□□□□□ -0.91
SF1-216ENST00000486867 SACSQ9NZJ4 4579 aa9.37□□□□□ -0.91
SF1-216ENST00000486867 hCG_2014768A0A024R1R8 64 aa9.36□□□□□ -0.91
SF1-216ENST00000486867 A0A1B0GVG6 124 aa9.36□□□□□ -0.91
SF1-216ENST00000486867 IGLV2-11P01706 119 aa9.36□□□□□ -0.91
SF1-216ENST00000486867 GPX1P07203 203 aa9.36□□□□□ -0.91
SF1-216ENST00000486867 FHITP49789 147 aa9.36□□□□□ -0.91
SF1-216ENST00000486867 SUMO1P63165 101 aaKnown RBP9.36□□□□□ -0.91
SF1-216ENST00000486867 BTN1A1Q13410 526 aa9.36□□□□□ -0.91
SF1-216ENST00000486867 Q6AWC8 147 aa9.36□□□□□ -0.91
SF1-216ENST00000486867 GOLT1AQ6ZVE7 132 aa9.36□□□□□ -0.91
SF1-216ENST00000486867 LINC00612Q8N6U2 182 aa9.36□□□□□ -0.91
SF1-216ENST00000486867 TMPRSS5Q9H3S3 457 aa9.36□□□□□ -0.91
SF1-216ENST00000486867 EPDR1Q9UM22 224 aa9.36□□□□□ -0.91
SF1-216ENST00000486867 ALMS1Q8TCU4 4167 aa9.36□□□□□ -0.91
SF1-216ENST00000486867 FBLL1A6NHQ2 334 aaKnown RBP9.35□□□□□ -0.91
SF1-216ENST00000486867 FAM74A7A6NL05 159 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms