RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 SPATA25Q9BR10 227 aa7.06□□□□□ -1.28
GABRE-209ENST00000486255 SIGLEC9Q9Y336 463 aa7.06□□□□□ -1.28
GABRE-209ENST00000486255 IGKV3D-7A0A0C4DH55 119 aa7.05□□□□□ -1.28
GABRE-209ENST00000486255 F8VRH5 84 aa7.05□□□□□ -1.28
GABRE-209ENST00000486255 C5orf64Q2M2E5 130 aa7.05□□□□□ -1.28
GABRE-209ENST00000486255 C5orf24Q7Z6I8 188 aa7.05□□□□□ -1.28
GABRE-209ENST00000486255 PIP4P2Q8N4L2 257 aa7.05□□□□□ -1.28
GABRE-209ENST00000486255 DNAJC13O75165 2243 aa7.05□□□□□ -1.28
GABRE-209ENST00000486255 PRSS29PA6NIE9 313 aa7.05□□□□□ -1.28
GABRE-209ENST00000486255 MLANAQ16655 118 aa7.05□□□□□ -1.28
GABRE-209ENST00000486255 SH2D6Q7Z4S9 175 aa7.05□□□□□ -1.28
GABRE-209ENST00000486255 C17orf82Q86X59 251 aaPredicted RBP7.05□□□□□ -1.28
GABRE-209ENST00000486255 GAFA1Q96PS6 74 aa7.05□□□□□ -1.28
GABRE-209ENST00000486255 SPRR3Q9UBC9 169 aa7.05□□□□□ -1.28
GABRE-209ENST00000486255 Q6P435 159 aa7.05□□□□□ -1.28
GABRE-209ENST00000486255 CFHR4Q92496 578 aa7.05□□□□□ -1.28
GABRE-209ENST00000486255 OOSP1A8MZH6 123 aa7.05□□□□□ -1.28
GABRE-209ENST00000486255 MRPL55Q7Z7F7 128 aaKnown RBP7.05□□□□□ -1.28
GABRE-209ENST00000486255 SDHAF1A6NFY7 115 aa7.04□□□□□ -1.28
GABRE-209ENST00000486255 PTPRZ1P23471 2315 aaPredicted RBP7.04□□□□□ -1.28
GABRE-209ENST00000486255 MP68P56378 58 aa7.04□□□□□ -1.28
GABRE-209ENST00000486255 Q6ZVH6 145 aa7.04□□□□□ -1.28
GABRE-209ENST00000486255 IGLV3-32A0A0A0MS00 114 aa7.04□□□□□ -1.28
GABRE-209ENST00000486255 TMEM178BH3BS89 294 aa7.04□□□□□ -1.28
GABRE-209ENST00000486255 QRFPP83859 136 aa7.04□□□□□ -1.28
GABRE-209ENST00000486255 RNF166Q96A37 237 aaPredicted RBP7.04□□□□□ -1.28
GABRE-209ENST00000486255 TEX48A0A1B0GUV7 120 aa7.04□□□□□ -1.28
GABRE-209ENST00000486255 PSPNO60542 156 aa7.04□□□□□ -1.28
GABRE-209ENST00000486255 SRRM5B3KS81 715 aa7.03□□□□□ -1.28
GABRE-209ENST00000486255 MYOFQ9NZM1 2061 aa7.03□□□□□ -1.28
GABRE-209ENST00000486255 HEATR5BQ9P2D3 2071 aa7.03□□□□□ -1.28
GABRE-209ENST00000486255 IGLL5B9A064 214 aa7.03□□□□□ -1.28
GABRE-209ENST00000486255 IGLC1P0CG04 106 aa7.03□□□□□ -1.28
GABRE-209ENST00000486255 EFNA4P52798 201 aa7.03□□□□□ -1.28
GABRE-209ENST00000486255 DAD1P61803 113 aa7.03□□□□□ -1.28
GABRE-209ENST00000486255 FAM231DQ6ZW35 169 aa7.03□□□□□ -1.28
GABRE-209ENST00000486255 KLHL30-AS1Q8NEE0 82 aa7.03□□□□□ -1.28
GABRE-209ENST00000486255 ZNRF2Q8NHG8 242 aa7.03□□□□□ -1.28
GABRE-209ENST00000486255 C14orf132Q9NPU4 83 aa7.03□□□□□ -1.28
GABRE-209ENST00000486255 LINC00205P59089 165 aa7.03□□□□□ -1.28
GABRE-209ENST00000486255 SCN2AQ99250 2005 aa7.03□□□□□ -1.28
GABRE-209ENST00000486255 DAZ1Q9NQZ3 744 aaKnown RBP7.03□□□□□ -1.28
GABRE-209ENST00000486255 KNTC1P50748 2209 aa7.03□□□□□ -1.28
GABRE-209ENST00000486255 IGHV2-70DA0A0C4DH43 119 aa7.03□□□□□ -1.28
GABRE-209ENST00000486255 DEFB131AP59861 70 aa7.03□□□□□ -1.28
GABRE-209ENST00000486255 ZNF726P1Q15940 193 aa7.03□□□□□ -1.28
GABRE-209ENST00000486255 MUSTN1Q8IVN3 82 aa7.03□□□□□ -1.28
GABRE-209ENST00000486255 DEFB125Q8N687 156 aa7.03□□□□□ -1.28
GABRE-209ENST00000486255 ICOSQ9Y6W8 199 aa7.03□□□□□ -1.28
GABRE-209ENST00000486255 IGHV1OR15-1A0A075B7D0 117 aa7.02□□□□□ -1.28
GABRE-209ENST00000486255 ZNF672Q499Z4 452 aaPredicted RBP7.02□□□□□ -1.28
GABRE-209ENST00000486255 RNASE13Q5GAN3 156 aaKnown RBP7.02□□□□□ -1.28
GABRE-209ENST00000486255 MDS2Q8NDY4 140 aa7.02□□□□□ -1.28
GABRE-209ENST00000486255 C22orf46C9J442 243 aa7.02□□□□□ -1.29
GABRE-209ENST00000486255 SPINK13Q1W4C9 94 aa7.02□□□□□ -1.29
GABRE-209ENST00000486255 C8orf86Q6ZUL3 223 aa7.02□□□□□ -1.29
GABRE-209ENST00000486255 PYGO2Q9BRQ0 406 aa7.02□□□□□ -1.29
GABRE-209ENST00000486255 PAX9P55771 341 aa7.02□□□□□ -1.29
GABRE-209ENST00000486255 DSCR9P59020 149 aa7.02□□□□□ -1.29
GABRE-209ENST00000486255 Q6ZS49 121 aa7.02□□□□□ -1.29
GABRE-209ENST00000486255 PRSS33Q8NF86 280 aa7.02□□□□□ -1.29
GABRE-209ENST00000486255 PNRC2Q9NPJ4 139 aaKnown RBP7.02□□□□□ -1.29
GABRE-209ENST00000486255 KLF2Q9Y5W3 355 aaPredicted RBP7.02□□□□□ -1.29
GABRE-209ENST00000486255 TRBV19A0A075B6N1 114 aa7.02□□□□□ -1.29
GABRE-209ENST00000486255 IGHV4-28A0A0C4DH34 117 aa7.02□□□□□ -1.29
GABRE-209ENST00000486255 PINLYPA6NC86 204 aa7.02□□□□□ -1.29
GABRE-209ENST00000486255 F5H768 121 aa7.02□□□□□ -1.29
GABRE-209ENST00000486255 FOXI2Q6ZQN5 318 aa7.02□□□□□ -1.29
GABRE-209ENST00000486255 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.02□□□□□ -1.29
GABRE-209ENST00000486255 C8orf31Q8N9H6 132 aa7.02□□□□□ -1.29
GABRE-209ENST00000486255 TPRP12270 2363 aaKnown RBP7.02□□□□□ -1.29
GABRE-209ENST00000486255 CKAP5Q14008 2032 aa7.02□□□□□ -1.29
GABRE-209ENST00000486255 LHBP01229 141 aa7.01□□□□□ -1.29
GABRE-209ENST00000486255 EFNA2O43921 213 aa7.01□□□□□ -1.29
GABRE-209ENST00000486255 LINC01545Q5VT33 79 aa7.01□□□□□ -1.29
GABRE-209ENST00000486255 ZNF493Q6ZR52 646 aa7.01□□□□□ -1.29
GABRE-209ENST00000486255 C20orf78Q9BR46 151 aa7.01□□□□□ -1.29
GABRE-209ENST00000486255 MYO7AQ13402 2215 aa7.01□□□□□ -1.29
GABRE-209ENST00000486255 H3BUX3 64 aa7.01□□□□□ -1.29
GABRE-209ENST00000486255 FUSP35637 526 aaKnown RBP eCLIP7.01□□□□□ -1.295e-9■■■□□ 17.6
GABRE-209ENST00000486255 CDPF1Q6NVV7 123 aa7.01□□□□□ -1.29
GABRE-209ENST00000486255 Q6ZRM9 215 aa7.01□□□□□ -1.29
GABRE-209ENST00000486255 SPTSSBQ8NFR3 76 aa7.01□□□□□ -1.29
GABRE-209ENST00000486255 WIPF2Q8TF74 440 aaPredicted RBP7.01□□□□□ -1.29
GABRE-209ENST00000486255 ZNF581Q9P0T4 197 aa7.01□□□□□ -1.29
GABRE-209ENST00000486255 IGLV3-12A0A075B6K2 115 aa7.01□□□□□ -1.29
GABRE-209ENST00000486255 NDUFB8O95169 186 aa7.01□□□□□ -1.29
GABRE-209ENST00000486255 SEC61GP60059 68 aa7.01□□□□□ -1.29
GABRE-209ENST00000486255 CR1LQ2VPA4 569 aa7.01□□□□□ -1.29
GABRE-209ENST00000486255 ZC2HC1AQ96GY0 325 aa7.01□□□□□ -1.29
GABRE-209ENST00000486255 TICRRQ7Z2Z1 1910 aa7.01□□□□□ -1.29
GABRE-209ENST00000486255 PRSS47A8MTI9 375 aa7.01□□□□□ -1.29
GABRE-209ENST00000486255 CGB3P0DN86 165 aa7.01□□□□□ -1.29
GABRE-209ENST00000486255 DYNAPQ8N1N2 210 aa7.01□□□□□ -1.29
GABRE-209ENST00000486255 KIR2DL5BA0A0G2JN68 375 aa7□□□□□ -1.29
GABRE-209ENST00000486255 KIR2DL5BA0A0G2JPC4 375 aa7□□□□□ -1.29
GABRE-209ENST00000486255 G3V4G9 280 aa7□□□□□ -1.29
GABRE-209ENST00000486255 H3BRN7 92 aa7□□□□□ -1.29
GABRE-209ENST00000486255 RNF144BQ7Z419 303 aa7□□□□□ -1.29
GABRE-209ENST00000486255 KIR2DL5AQ8N109 375 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms