RNA–Protein interactions for RNA: ENST00000486045.1

RHBDF1-209, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 2

Gene RHBDF1, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-209ENST00000486045 RNF212Q495C1 297 aa12.92□□□□□ -0.34
RHBDF1-209ENST00000486045 RAB24Q969Q5 203 aa12.92□□□□□ -0.34
RHBDF1-209ENST00000486045 C17orf77Q96MU5 243 aa12.92□□□□□ -0.34
RHBDF1-209ENST00000486045 PRM2P04554 102 aa12.91□□□□□ -0.34
RHBDF1-209ENST00000486045 IGLC2P0DOY2 106 aa12.91□□□□□ -0.34
RHBDF1-209ENST00000486045 HIST1H1EP10412 219 aaKnown RBP12.91□□□□□ -0.34
RHBDF1-209ENST00000486045 DAD1P61803 113 aa12.91□□□□□ -0.34
RHBDF1-209ENST00000486045 GUK1Q16774 197 aa12.91□□□□□ -0.34
RHBDF1-209ENST00000486045 KHDC3LQ587J8 217 aa12.91□□□□□ -0.34
RHBDF1-209ENST00000486045 SAMD13Q5VXD3 122 aa12.91□□□□□ -0.34
RHBDF1-209ENST00000486045 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.91□□□□□ -0.34
RHBDF1-209ENST00000486045 C16orf92Q96LL3 132 aa12.91□□□□□ -0.34
RHBDF1-209ENST00000486045 PAXXQ9BUH6 204 aa12.91□□□□□ -0.34
RHBDF1-209ENST00000486045 H3BQ15 152 aa12.9□□□□□ -0.34
RHBDF1-209ENST00000486045 HMGB3O15347 200 aaKnown RBP12.9□□□□□ -0.34
RHBDF1-209ENST00000486045 OR7C2O60412 319 aa12.9□□□□□ -0.34
RHBDF1-209ENST00000486045 EIF3GO75821 320 aaKnown RBP eCLIP12.9□□□□□ -0.34
RHBDF1-209ENST00000486045 PYYP10082 97 aa12.9□□□□□ -0.34
RHBDF1-209ENST00000486045 ZNF726P1Q15940 193 aa12.9□□□□□ -0.34
RHBDF1-209ENST00000486045 C1orf134Q5TEV5 83 aa12.9□□□□□ -0.34
RHBDF1-209ENST00000486045 AMTNQ6UX39 209 aa12.9□□□□□ -0.34
RHBDF1-209ENST00000486045 DPPA3Q6W0C5 159 aa12.9□□□□□ -0.34
RHBDF1-209ENST00000486045 PQLC2Q6ZP29 291 aa12.9□□□□□ -0.34
RHBDF1-209ENST00000486045 LRRC20Q8TCA0 184 aa12.9□□□□□ -0.34
RHBDF1-209ENST00000486045 RNF141Q8WVD5 230 aa12.9□□□□□ -0.34
RHBDF1-209ENST00000486045 ZNF503Q96F45 646 aa12.9□□□□□ -0.34
RHBDF1-209ENST00000486045 PHYHIPLQ96FC7 376 aa12.9□□□□□ -0.34
RHBDF1-209ENST00000486045 ZNF586Q9NXT0 402 aa12.9□□□□□ -0.34
RHBDF1-209ENST00000486045 HSPG2P98160 4391 aa12.9□□□□□ -0.35
RHBDF1-209ENST00000486045 CTXND1A0A1B0GTU2 59 aa12.89□□□□□ -0.35
RHBDF1-209ENST00000486045 SNRPCP09234 159 aaKnown RBP12.89□□□□□ -0.35
RHBDF1-209ENST00000486045 NBEAP1P0C6P0 100 aa12.89□□□□□ -0.35
RHBDF1-209ENST00000486045 STAG3L2P0CL84 134 aa12.89□□□□□ -0.35
RHBDF1-209ENST00000486045 STAG3L3P0CL85 134 aa12.89□□□□□ -0.35
RHBDF1-209ENST00000486045 RAB5CP51148 216 aa12.89□□□□□ -0.35
RHBDF1-209ENST00000486045 SOHLH1Q5JUK2 328 aa12.89□□□□□ -0.35
RHBDF1-209ENST00000486045 FXYD5Q96DB9 178 aa12.89□□□□□ -0.35
RHBDF1-209ENST00000486045 SAT2Q96F10 170 aaPredicted RBP12.89□□□□□ -0.35
RHBDF1-209ENST00000486045 TMEM208Q9BTX3 173 aa12.89□□□□□ -0.35
RHBDF1-209ENST00000486045 A8MTW9 85 aa12.88□□□□□ -0.35
RHBDF1-209ENST00000486045 OR10J4P0C629 311 aa12.88□□□□□ -0.35
RHBDF1-209ENST00000486045 FHITP49789 147 aa12.88□□□□□ -0.35
RHBDF1-209ENST00000486045 SULT1A2P50226 295 aa12.88□□□□□ -0.35
RHBDF1-209ENST00000486045 IGFL4Q6B9Z1 124 aa12.88□□□□□ -0.35
RHBDF1-209ENST00000486045 LCN15Q6UWW0 184 aa12.88□□□□□ -0.35
RHBDF1-209ENST00000486045 SSX7Q7RTT5 188 aa12.88□□□□□ -0.35
RHBDF1-209ENST00000486045 FAM213BQ8TBF2 198 aa12.88□□□□□ -0.35
RHBDF1-209ENST00000486045 IGF2BP2-AS1Q96M15 143 aa12.88□□□□□ -0.35
RHBDF1-209ENST00000486045 TRBV19A0A075B6N1 114 aa12.87□□□□□ -0.35
RHBDF1-209ENST00000486045 ZNF705GA8MUZ8 300 aaPredicted RBP12.87□□□□□ -0.35
RHBDF1-209ENST00000486045 H3BTX0 84 aa12.87□□□□□ -0.35
RHBDF1-209ENST00000486045 M0R2Z0 102 aa12.87□□□□□ -0.35
RHBDF1-209ENST00000486045 CXorf1O96002 111 aa12.87□□□□□ -0.35
RHBDF1-209ENST00000486045 ARL14EPLP0DKL9 152 aa12.87□□□□□ -0.35
RHBDF1-209ENST00000486045 SPINK13Q1W4C9 94 aa12.87□□□□□ -0.35
RHBDF1-209ENST00000486045 BLNKQ8WV28 456 aa12.87□□□□□ -0.35
RHBDF1-209ENST00000486045 SLC50A1Q9BRV3 221 aa12.87□□□□□ -0.35
RHBDF1-209ENST00000486045 TRAV8-2A0A0B4J237 113 aa12.86□□□□□ -0.35
RHBDF1-209ENST00000486045 ZNF253O75346 499 aa12.86□□□□□ -0.35
RHBDF1-209ENST00000486045 CNN1P51911 297 aaKnown RBP12.86□□□□□ -0.35
RHBDF1-209ENST00000486045 UBE2L3P68036 154 aaKnown RBP12.86□□□□□ -0.35
RHBDF1-209ENST00000486045 ALKAL2Q6UX46 152 aa12.86□□□□□ -0.35
RHBDF1-209ENST00000486045 MBD3L1Q8WWY6 194 aa12.86□□□□□ -0.35
RHBDF1-209ENST00000486045 ZNF331Q9NQX6 463 aaPredicted RBP12.86□□□□□ -0.35
RHBDF1-209ENST00000486045 MAP1LC3B2A6NCE7 125 aa12.85□□□□□ -0.35
RHBDF1-209ENST00000486045 CRXO43186 299 aaPredicted RBP12.85□□□□□ -0.35
RHBDF1-209ENST00000486045 GCHFRP30047 84 aa12.85□□□□□ -0.35
RHBDF1-209ENST00000486045 PDE6HQ13956 83 aa12.85□□□□□ -0.35
RHBDF1-209ENST00000486045 RNF182Q8N6D2 247 aa12.85□□□□□ -0.35
RHBDF1-209ENST00000486045 SFT2D1Q8WV19 159 aa12.85□□□□□ -0.35
RHBDF1-209ENST00000486045 MAP1LC3BQ9GZQ8 125 aa12.85□□□□□ -0.35
RHBDF1-209ENST00000486045 MUC4Q99102 2169 aa12.84□□□□□ -0.35
RHBDF1-209ENST00000486045 SLC17A3O00476 420 aa12.84□□□□□ -0.35
RHBDF1-209ENST00000486045 NDUFB4O95168 129 aa12.84□□□□□ -0.35
RHBDF1-209ENST00000486045 H2AFB1P0C5Y9 115 aa12.84□□□□□ -0.35
RHBDF1-209ENST00000486045 DEFB130BP0DP73 79 aa12.84□□□□□ -0.35
RHBDF1-209ENST00000486045 DEFB130AP0DP74 79 aa12.84□□□□□ -0.35
RHBDF1-209ENST00000486045 FGF8P55075 233 aaPredicted RBP12.84□□□□□ -0.35
RHBDF1-209ENST00000486045 TNP2Q05952 138 aa12.84□□□□□ -0.35
RHBDF1-209ENST00000486045 FAM74A1Q5RGS3 127 aa12.84□□□□□ -0.35
RHBDF1-209ENST00000486045 C15orf53Q8NAA6 179 aa12.84□□□□□ -0.35
RHBDF1-209ENST00000486045 SUN5Q8TC36 379 aa12.84□□□□□ -0.35
RHBDF1-209ENST00000486045 ATG101Q9BSB4 218 aa12.84□□□□□ -0.35
RHBDF1-209ENST00000486045 TMEM167BQ9NRX6 74 aa12.84□□□□□ -0.35
RHBDF1-209ENST00000486045 LRP1BQ9NZR2 4599 aa12.83□□□□□ -0.36
RHBDF1-209ENST00000486045 INSP01308 110 aa12.83□□□□□ -0.36
RHBDF1-209ENST00000486045 AZU1P20160 251 aa12.83□□□□□ -0.36
RHBDF1-209ENST00000486045 RANP62826 216 aaKnown RBP12.83□□□□□ -0.36
RHBDF1-209ENST00000486045 PSG3Q16557 428 aa12.83□□□□□ -0.36
RHBDF1-209ENST00000486045 NACAE9PAV3 2078 aa12.83□□□□□ -0.36
RHBDF1-209ENST00000486045 TRAV12-2A0A075B6T6 113 aa12.82□□□□□ -0.36
RHBDF1-209ENST00000486045 PLAC8L1A1L4L8 177 aa12.82□□□□□ -0.36
RHBDF1-209ENST00000486045 LYRM9A8MSI8 78 aa12.82□□□□□ -0.36
RHBDF1-209ENST00000486045 DUSP14O95147 198 aaKnown RBP12.82□□□□□ -0.36
RHBDF1-209ENST00000486045 PRB4P10163 310 aaPredicted RBP12.82□□□□□ -0.36
RHBDF1-209ENST00000486045 FAM3BP58499 235 aaPredicted RBP12.82□□□□□ -0.36
RHBDF1-209ENST00000486045 TEX261Q6UWH6 196 aa12.82□□□□□ -0.36
RHBDF1-209ENST00000486045 IQCF2Q8IXL9 164 aa12.82□□□□□ -0.36
RHBDF1-209ENST00000486045 LYPD1Q8N2G4 141 aa12.82□□□□□ -0.36
RHBDF1-209ENST00000486045 TMPRSS5Q9H3S3 457 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms