RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 AQP10Q96PS8 301 aa13.8□□□□□ -0.2
SNX5-213ENST00000486039 TIMM8BQ9Y5J9 83 aaPredicted RBP13.8□□□□□ -0.2
SNX5-213ENST00000486039 SLC25A5P05141 298 aaKnown RBP13.79□□□□□ -0.2
SNX5-213ENST00000486039 GIPP09681 153 aaPredicted RBP13.79□□□□□ -0.2
SNX5-213ENST00000486039 P0DMU3 169 aa13.79□□□□□ -0.2
SNX5-213ENST00000486039 FAM231AP0DMU4 169 aa13.79□□□□□ -0.2
SNX5-213ENST00000486039 FAM231CP0DMU5 169 aa13.79□□□□□ -0.2
SNX5-213ENST00000486039 RANP62826 216 aaKnown RBP13.79□□□□□ -0.2
SNX5-213ENST00000486039 UBE2L3P68036 154 aaKnown RBP13.79□□□□□ -0.2
SNX5-213ENST00000486039 CD300CQ08708 224 aa13.79□□□□□ -0.2
SNX5-213ENST00000486039 KHDC3LQ587J8 217 aa13.79□□□□□ -0.2
SNX5-213ENST00000486039 NOP10Q9NPE3 64 aaKnown RBP13.79□□□□□ -0.2
SNX5-213ENST00000486039 C7orf71A4D174 169 aa13.78□□□□□ -0.2
SNX5-213ENST00000486039 ZNF324O75467 553 aaPredicted RBP13.78□□□□□ -0.2
SNX5-213ENST00000486039 CRISP2P16562 243 aa13.78□□□□□ -0.2
SNX5-213ENST00000486039 M6PRP20645 277 aa13.78□□□□□ -0.2
SNX5-213ENST00000486039 TAS2R45P59539 299 aa13.78□□□□□ -0.2
SNX5-213ENST00000486039 RAB2AP61019 212 aa13.78□□□□□ -0.2
SNX5-213ENST00000486039 BTN1A1Q13410 526 aa13.78□□□□□ -0.2
SNX5-213ENST00000486039 ACOT6Q3I5F7 207 aaPredicted RBP13.78□□□□□ -0.2
SNX5-213ENST00000486039 CCDC28AQ8IWP9 274 aa13.78□□□□□ -0.2
SNX5-213ENST00000486039 LYPD1Q8N2G4 141 aa13.78□□□□□ -0.2
SNX5-213ENST00000486039 POM121L12Q8N7R1 296 aa13.78□□□□□ -0.2
SNX5-213ENST00000486039 Q9H3A6 140 aa13.78□□□□□ -0.2
SNX5-213ENST00000486039 HECTD4Q9Y4D8 3996 aa13.78□□□□□ -0.2
SNX5-213ENST00000486039 ASB13Q8WXK3 278 aa13.77□□□□□ -0.21
SNX5-213ENST00000486039 PYGO2Q9BRQ0 406 aa13.77□□□□□ -0.21
SNX5-213ENST00000486039 ZNF492Q9P255 531 aa13.77□□□□□ -0.21
SNX5-213ENST00000486039 CBY3A6NI87 242 aa13.76□□□□□ -0.21
SNX5-213ENST00000486039 ZNF266Q14584 549 aa13.76□□□□□ -0.21
SNX5-213ENST00000486039 TMEM78Q5T7P6 136 aa13.76□□□□□ -0.21
SNX5-213ENST00000486039 PRR9Q5T870 116 aa13.76□□□□□ -0.21
SNX5-213ENST00000486039 ZFAND2AQ8N6M9 145 aa13.76□□□□□ -0.21
SNX5-213ENST00000486039 LINC00612Q8N6U2 182 aa13.76□□□□□ -0.21
SNX5-213ENST00000486039 HSD17B11Q8NBQ5 300 aa13.76□□□□□ -0.21
SNX5-213ENST00000486039 A0A1W2PPV4 95 aa13.75□□□□□ -0.21
SNX5-213ENST00000486039 F5H768 121 aa13.75□□□□□ -0.21
SNX5-213ENST00000486039 ATP5G1P05496 136 aa13.75□□□□□ -0.21
SNX5-213ENST00000486039 GPX1P07203 203 aa13.75□□□□□ -0.21
SNX5-213ENST00000486039 RNASE4P34096 147 aaKnown RBP13.75□□□□□ -0.21
SNX5-213ENST00000486039 ATP5G3P48201 142 aa13.75□□□□□ -0.21
SNX5-213ENST00000486039 Q6ZQT7 251 aa13.75□□□□□ -0.21
SNX5-213ENST00000486039 OR10G4Q8NGN3 311 aa13.75□□□□□ -0.21
SNX5-213ENST00000486039 OR10G9Q8NGN4 311 aa13.75□□□□□ -0.21
SNX5-213ENST00000486039 OR10G7Q8NGN6 311 aa13.75□□□□□ -0.21
SNX5-213ENST00000486039 RNF222A6NCQ9 220 aa13.74□□□□□ -0.21
SNX5-213ENST00000486039 NMBP08949 121 aa13.74□□□□□ -0.21
SNX5-213ENST00000486039 ATP6V0CP27449 155 aa13.74□□□□□ -0.21
SNX5-213ENST00000486039 CSN1S1P47710 185 aa13.74□□□□□ -0.21
SNX5-213ENST00000486039 OR2G3Q8NGZ4 309 aa13.74□□□□□ -0.21
SNX5-213ENST00000486039 Q8TAT8 98 aa13.74□□□□□ -0.21
SNX5-213ENST00000486039 LINC00467Q9BRT7 94 aa13.74□□□□□ -0.21
SNX5-213ENST00000486039 DNAH17Q9UFH2 4485 aa13.74□□□□□ -0.21
SNX5-213ENST00000486039 RBAKDNA6NC62 111 aa13.73□□□□□ -0.21
SNX5-213ENST00000486039 SNURFLB1AK76 121 aa13.73□□□□□ -0.21
SNX5-213ENST00000486039 DIRC3C9JPN6 131 aa13.73□□□□□ -0.21
SNX5-213ENST00000486039 HMGB3O15347 200 aaKnown RBP13.73□□□□□ -0.21
SNX5-213ENST00000486039 ZNF138P52744 262 aa13.73□□□□□ -0.21
SNX5-213ENST00000486039 PQLC2Q6ZP29 291 aa13.73□□□□□ -0.21
SNX5-213ENST00000486039 C11orf72Q8NBR9 251 aa13.73□□□□□ -0.21
SNX5-213ENST00000486039 PSMG3Q9BT73 122 aaPredicted RBP13.73□□□□□ -0.21
SNX5-213ENST00000486039 G3V3Q6 166 aa13.72□□□□□ -0.21
SNX5-213ENST00000486039 C15orf53Q8NAA6 179 aa13.72□□□□□ -0.21
SNX5-213ENST00000486039 OR2T35Q8NGX2 323 aa13.72□□□□□ -0.21
SNX5-213ENST00000486039 OTORQ9NRC9 128 aa13.72□□□□□ -0.21
SNX5-213ENST00000486039 GSN-AS1Q9NRJ2 163 aa13.72□□□□□ -0.21
SNX5-213ENST00000486039 TNFSF18Q9UNG2 199 aa13.72□□□□□ -0.21
SNX5-213ENST00000486039 DNAH2Q9P225 4427 aa13.72□□□□□ -0.21
SNX5-213ENST00000486039 FXYD6-FXYD2A0A087WZ82 144 aa13.71□□□□□ -0.21
SNX5-213ENST00000486039 TRBV7-9A0A0J9YWB2 115 aa13.71□□□□□ -0.21
SNX5-213ENST00000486039 GAGE12BA1L429 117 aa13.71□□□□□ -0.21
SNX5-213ENST00000486039 PGPA6NDG6 321 aa13.71□□□□□ -0.21
SNX5-213ENST00000486039 GAGE7O76087 117 aa13.71□□□□□ -0.21
SNX5-213ENST00000486039 GAGE12FP0CL80 117 aa13.71□□□□□ -0.21
SNX5-213ENST00000486039 GAGE12GP0CL81 117 aa13.71□□□□□ -0.21
SNX5-213ENST00000486039 GAGE12IP0CL82 117 aa13.71□□□□□ -0.21
SNX5-213ENST00000486039 DAZ2Q13117 558 aaKnown RBP13.71□□□□□ -0.21
SNX5-213ENST00000486039 ANXA2RQ3ZCQ2 193 aa13.71□□□□□ -0.21
SNX5-213ENST00000486039 UBE2DNLQ8IWF7 75 aa13.71□□□□□ -0.21
SNX5-213ENST00000486039 EIF4E3Q8N5X7 224 aaKnown RBP13.71□□□□□ -0.21
SNX5-213ENST00000486039 INO80EQ8NBZ0 244 aaPredicted RBP13.71□□□□□ -0.21
SNX5-213ENST00000486039 RXFP4Q8TDU9 374 aa13.71□□□□□ -0.21
SNX5-213ENST00000486039 HYLS1Q96M11 299 aa13.71□□□□□ -0.21
SNX5-213ENST00000486039 SH3BGRL3Q9H299 93 aa13.71□□□□□ -0.21
SNX5-213ENST00000486039 KIAA1109Q2LD37 5005 aa13.71□□□□□ -0.22
SNX5-213ENST00000486039 STAG3L2P0CL84 134 aa13.7□□□□□ -0.22
SNX5-213ENST00000486039 STAG3L3P0CL85 134 aa13.7□□□□□ -0.22
SNX5-213ENST00000486039 CDC34P49427 236 aaPredicted RBP13.7□□□□□ -0.22
SNX5-213ENST00000486039 RPL7L1Q6DKI1 246 aaKnown RBP13.7□□□□□ -0.22
SNX5-213ENST00000486039 ZNF680Q8NEM1 530 aa13.7□□□□□ -0.22
SNX5-213ENST00000486039 TP53TG3Q9ULZ0 132 aa13.7□□□□□ -0.22
SNX5-213ENST00000486039 ARL14EPLP0DKL9 152 aa13.69□□□□□ -0.22
SNX5-213ENST00000486039 SERF2P84101 59 aa13.69□□□□□ -0.22
SNX5-213ENST00000486039 RNF212Q495C1 297 aa13.69□□□□□ -0.22
SNX5-213ENST00000486039 Q6ZTI0 123 aa13.69□□□□□ -0.22
SNX5-213ENST00000486039 RAB24Q969Q5 203 aa13.69□□□□□ -0.22
SNX5-213ENST00000486039 FAT2Q9NYQ8 4349 aa13.68□□□□□ -0.22
SNX5-213ENST00000486039 IGHV1OR15-1A0A075B7D0 117 aa13.68□□□□□ -0.22
SNX5-213ENST00000486039 CMTM2Q8TAZ6 248 aa13.68□□□□□ -0.22
SNX5-213ENST00000486039 KRTAP17-1Q9BYP8 105 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms