RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 PRAC2D3DTV9 90 aa4.96□□□□□ -1.62
VPS50-218ENST00000485994 G3V3Q6 166 aa4.96□□□□□ -1.62
VPS50-218ENST00000485994 SLC25A5P05141 298 aaKnown RBP4.96□□□□□ -1.62
VPS50-218ENST00000485994 CT45A10P0DMU9 189 aa4.96□□□□□ -1.62
VPS50-218ENST00000485994 AZU1P20160 251 aa4.96□□□□□ -1.62
VPS50-218ENST00000485994 LEPP41159 167 aa4.96□□□□□ -1.62
VPS50-218ENST00000485994 DAD1P61803 113 aa4.96□□□□□ -1.62
VPS50-218ENST00000485994 RNF212Q495C1 297 aa4.96□□□□□ -1.62
VPS50-218ENST00000485994 Q5BKY6 102 aa4.96□□□□□ -1.62
VPS50-218ENST00000485994 Q6ZNX1 250 aa4.96□□□□□ -1.62
VPS50-218ENST00000485994 C9orf47Q6ZRZ4 202 aa4.96□□□□□ -1.62
VPS50-218ENST00000485994 POM121L12Q8N7R1 296 aa4.96□□□□□ -1.62
VPS50-218ENST00000485994 C16orf74Q96GX8 76 aa4.96□□□□□ -1.62
VPS50-218ENST00000485994 LINC01587Q99440 93 aa4.96□□□□□ -1.62
VPS50-218ENST00000485994 SLC25A2Q9BXI2 301 aa4.96□□□□□ -1.62
VPS50-218ENST00000485994 FUT9Q9Y231 359 aa4.96□□□□□ -1.62
VPS50-218ENST00000485994 TIMM8BQ9Y5J9 83 aaPredicted RBP4.96□□□□□ -1.62
VPS50-218ENST00000485994 MUC4Q99102 2169 aa4.96□□□□□ -1.62
VPS50-218ENST00000485994 RBAKDNA6NC62 111 aa4.95□□□□□ -1.62
VPS50-218ENST00000485994 KLLNB2CW77 178 aa4.95□□□□□ -1.62
VPS50-218ENST00000485994 ZNF324O75467 553 aaPredicted RBP4.95□□□□□ -1.62
VPS50-218ENST00000485994 IFNA5P01569 189 aa4.95□□□□□ -1.62
VPS50-218ENST00000485994 CRISP2P16562 243 aa4.95□□□□□ -1.62
VPS50-218ENST00000485994 EMP1P54849 157 aa4.95□□□□□ -1.62
VPS50-218ENST00000485994 CLINT1Q14677 625 aa4.95□□□□□ -1.62
VPS50-218ENST00000485994 LRRC37A5PQ49AS3 106 aa4.95□□□□□ -1.62
VPS50-218ENST00000485994 GCSAMLQ5JQS6 135 aa4.95□□□□□ -1.62
VPS50-218ENST00000485994 MIR17HGQ75NE6 70 aa4.95□□□□□ -1.62
VPS50-218ENST00000485994 BAP18Q8IXM2 172 aa4.95□□□□□ -1.62
VPS50-218ENST00000485994 LINC00612Q8N6U2 182 aa4.95□□□□□ -1.62
VPS50-218ENST00000485994 C15orf53Q8NAA6 179 aa4.95□□□□□ -1.62
VPS50-218ENST00000485994 THAP6Q8TBB0 222 aa4.95□□□□□ -1.62
VPS50-218ENST00000485994 RNASE8Q8TDE3 154 aaKnown RBP4.95□□□□□ -1.62
VPS50-218ENST00000485994 TMEM263Q8WUH6 116 aaKnown RBP4.95□□□□□ -1.62
VPS50-218ENST00000485994 RNF141Q8WVD5 230 aa4.95□□□□□ -1.62
VPS50-218ENST00000485994 C18orf15Q96N68 181 aa4.95□□□□□ -1.62
VPS50-218ENST00000485994 PYGO2Q9BRQ0 406 aa4.95□□□□□ -1.62
VPS50-218ENST00000485994 AGPAT4-IT1Q9H0P7 198 aa4.95□□□□□ -1.62
VPS50-218ENST00000485994 MED28Q9H204 178 aa4.95□□□□□ -1.62
VPS50-218ENST00000485994 AAMDCQ9H7C9 122 aa4.95□□□□□ -1.62
VPS50-218ENST00000485994 TIMM9Q9Y5J7 89 aa4.95□□□□□ -1.62
VPS50-218ENST00000485994 LENEPQ9Y5L5 61 aa4.95□□□□□ -1.62
VPS50-218ENST00000485994 NACAE9PAV3 2078 aa4.94□□□□□ -1.62
VPS50-218ENST00000485994 M0R3E3 92 aa4.94□□□□□ -1.62
VPS50-218ENST00000485994 PRM2P04554 102 aa4.94□□□□□ -1.62
VPS50-218ENST00000485994 ATP5G1P05496 136 aa4.94□□□□□ -1.62
VPS50-218ENST00000485994 SNRPCP09234 159 aaKnown RBP4.94□□□□□ -1.62
VPS50-218ENST00000485994 PYYP10082 97 aa4.94□□□□□ -1.62
VPS50-218ENST00000485994 ATP5G3P48201 142 aa4.94□□□□□ -1.62
VPS50-218ENST00000485994 FAM3BP58499 235 aaPredicted RBP4.94□□□□□ -1.62
VPS50-218ENST00000485994 TAS2R45P59539 299 aa4.94□□□□□ -1.62
VPS50-218ENST00000485994 DAZ2Q13117 558 aaKnown RBP4.94□□□□□ -1.62
VPS50-218ENST00000485994 LGALS9BQ3B8N2 356 aa4.94□□□□□ -1.62
VPS50-218ENST00000485994 ANXA2RQ3ZCQ2 193 aa4.94□□□□□ -1.62
VPS50-218ENST00000485994 GFI1BQ5VTD9 330 aa4.94□□□□□ -1.62
VPS50-218ENST00000485994 ZNF767PQ75MW2 155 aa4.94□□□□□ -1.62
VPS50-218ENST00000485994 CCDC28AQ8IWP9 274 aa4.94□□□□□ -1.62
VPS50-218ENST00000485994 SCGB1C1Q8TD33 95 aa4.94□□□□□ -1.62
VPS50-218ENST00000485994 TMED6Q8WW62 240 aa4.94□□□□□ -1.62
VPS50-218ENST00000485994 FXYD5Q96DB9 178 aa4.94□□□□□ -1.62
VPS50-218ENST00000485994 ZNF503Q96F45 646 aa4.94□□□□□ -1.62
VPS50-218ENST00000485994 PAXXQ9BUH6 204 aa4.94□□□□□ -1.62
VPS50-218ENST00000485994 H3BNG1 76 aa4.93□□□□□ -1.62
VPS50-218ENST00000485994 H3BTX0 84 aa4.93□□□□□ -1.62
VPS50-218ENST00000485994 GIPP09681 153 aaPredicted RBP4.93□□□□□ -1.62
VPS50-218ENST00000485994 M6PRP20645 277 aa4.93□□□□□ -1.62
VPS50-218ENST00000485994 SERF2P84101 59 aa4.93□□□□□ -1.62
VPS50-218ENST00000485994 ICAM4Q14773 271 aa4.93□□□□□ -1.62
VPS50-218ENST00000485994 KIR3DS1Q14943 382 aa4.93□□□□□ -1.62
VPS50-218ENST00000485994 ACOT6Q3I5F7 207 aaPredicted RBP4.93□□□□□ -1.62
VPS50-218ENST00000485994 FFAR4Q5NUL3 377 aa4.93□□□□□ -1.62
VPS50-218ENST00000485994 PQLC2Q6ZP29 291 aa4.93□□□□□ -1.62
VPS50-218ENST00000485994 LINC00336Q6ZUF6 198 aa4.93□□□□□ -1.62
VPS50-218ENST00000485994 OR2G3Q8NGZ4 309 aa4.93□□□□□ -1.62
VPS50-218ENST00000485994 SUN5Q8TC36 379 aa4.93□□□□□ -1.62
VPS50-218ENST00000485994 RXFP4Q8TDU9 374 aa4.93□□□□□ -1.62
VPS50-218ENST00000485994 AQP10Q96PS8 301 aa4.93□□□□□ -1.62
VPS50-218ENST00000485994 WFDC1Q9HC57 220 aa4.93□□□□□ -1.62
VPS50-218ENST00000485994 ZNF492Q9P255 531 aa4.93□□□□□ -1.62
VPS50-218ENST00000485994 MBD2Q9UBB5 411 aa4.93□□□□□ -1.62
VPS50-218ENST00000485994 TP53TG3Q9ULZ0 132 aa4.93□□□□□ -1.62
VPS50-218ENST00000485994 HECTD4Q9Y4D8 3996 aa4.92□□□□□ -1.62
VPS50-218ENST00000485994 C7orf71A4D174 169 aa4.92□□□□□ -1.62
VPS50-218ENST00000485994 DEFB130BP0DP73 79 aa4.92□□□□□ -1.62
VPS50-218ENST00000485994 DEFB130AP0DP74 79 aa4.92□□□□□ -1.62
VPS50-218ENST00000485994 CSN1S1P47710 185 aa4.92□□□□□ -1.62
VPS50-218ENST00000485994 ZNF138P52744 262 aa4.92□□□□□ -1.62
VPS50-218ENST00000485994 ERCC8Q13216 396 aa4.92□□□□□ -1.62
VPS50-218ENST00000485994 ZNF266Q14584 549 aa4.92□□□□□ -1.62
VPS50-218ENST00000485994 KHDC3LQ587J8 217 aa4.92□□□□□ -1.62
VPS50-218ENST00000485994 IBA57Q5T440 356 aaKnown RBP4.92□□□□□ -1.62
VPS50-218ENST00000485994 TMEM78Q5T7P6 136 aa4.92□□□□□ -1.62
VPS50-218ENST00000485994 EXOC3-AS1Q8N2X6 119 aa4.92□□□□□ -1.62
VPS50-218ENST00000485994 ZFAND2AQ8N6M9 145 aa4.92□□□□□ -1.62
VPS50-218ENST00000485994 ZNF680Q8NEM1 530 aa4.92□□□□□ -1.62
VPS50-218ENST00000485994 BLNKQ8WV28 456 aa4.92□□□□□ -1.62
VPS50-218ENST00000485994 PSMG3Q9BT73 122 aaPredicted RBP4.92□□□□□ -1.62
VPS50-218ENST00000485994 NOP10Q9NPE3 64 aaKnown RBP4.92□□□□□ -1.62
VPS50-218ENST00000485994 DNAH2Q9P225 4427 aa4.92□□□□□ -1.62
VPS50-218ENST00000485994 TRAV12-3A0A0B4J271 114 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms