RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 CT45A10P0DMU9 189 aa8.61□□□□□ -1.03
HLA-DOA-204ENST00000485901 LEPP41159 167 aa8.61□□□□□ -1.03
HLA-DOA-204ENST00000485901 NANOS2P60321 138 aaKnown RBP8.61□□□□□ -1.03
HLA-DOA-204ENST00000485901 ERCC8Q13216 396 aa8.61□□□□□ -1.03
HLA-DOA-204ENST00000485901 FAM74A1Q5RGS3 127 aa8.61□□□□□ -1.03
HLA-DOA-204ENST00000485901 BAP18Q8IXM2 172 aa8.61□□□□□ -1.03
HLA-DOA-204ENST00000485901 RXFP4Q8TDU9 374 aa8.61□□□□□ -1.03
HLA-DOA-204ENST00000485901 C2CD4CQ8TF44 421 aa8.61□□□□□ -1.03
HLA-DOA-204ENST00000485901 RAB24Q969Q5 203 aa8.61□□□□□ -1.03
HLA-DOA-204ENST00000485901 LINC01587Q99440 93 aa8.61□□□□□ -1.03
HLA-DOA-204ENST00000485901 C20orf144Q9BQM9 153 aa8.61□□□□□ -1.03
HLA-DOA-204ENST00000485901 PGPA6NDG6 321 aa8.6□□□□□ -1.03
HLA-DOA-204ENST00000485901 SPART-AS1P0CW21 52 aa8.6□□□□□ -1.03
HLA-DOA-204ENST00000485901 EMP1P54849 157 aa8.6□□□□□ -1.03
HLA-DOA-204ENST00000485901 AKR1C8PQ5T2L2 129 aa8.6□□□□□ -1.03
HLA-DOA-204ENST00000485901 C9orf47Q6ZRZ4 202 aa8.6□□□□□ -1.03
HLA-DOA-204ENST00000485901 CMTM2Q8TAZ6 248 aa8.6□□□□□ -1.03
HLA-DOA-204ENST00000485901 ST6GAL2Q96JF0 529 aa8.6□□□□□ -1.03
HLA-DOA-204ENST00000485901 AGPAT4-IT1Q9H0P7 198 aa8.6□□□□□ -1.03
HLA-DOA-204ENST00000485901 OTORQ9NRC9 128 aa8.6□□□□□ -1.03
HLA-DOA-204ENST00000485901 IGKV2-40A0A087WW87 121 aaPredicted RBP8.59□□□□□ -1.03
HLA-DOA-204ENST00000485901 LOC102723971A0A1B0GUV8 181 aa8.59□□□□□ -1.03
HLA-DOA-204ENST00000485901 KANTRA0A1W2PQU2 76 aa8.59□□□□□ -1.03
HLA-DOA-204ENST00000485901 RBAKDNA6NC62 111 aa8.59□□□□□ -1.03
HLA-DOA-204ENST00000485901 ZNF705GA8MUZ8 300 aaPredicted RBP8.59□□□□□ -1.03
HLA-DOA-204ENST00000485901 CXorf1O96002 111 aa8.59□□□□□ -1.03
HLA-DOA-204ENST00000485901 IGKV2D-40P01614 121 aaPredicted RBP8.59□□□□□ -1.03
HLA-DOA-204ENST00000485901 ARL14EPLP0DKL9 152 aa8.59□□□□□ -1.03
HLA-DOA-204ENST00000485901 TAS2R60P59551 318 aa8.59□□□□□ -1.03
HLA-DOA-204ENST00000485901 TMEM78Q5T7P6 136 aa8.59□□□□□ -1.03
HLA-DOA-204ENST00000485901 ARL6IP6Q8N6S5 226 aa8.59□□□□□ -1.03
HLA-DOA-204ENST00000485901 TEX48A0A1B0GUV7 120 aa8.58□□□□□ -1.04
HLA-DOA-204ENST00000485901 H7BYZ3 331 aa8.58□□□□□ -1.04
HLA-DOA-204ENST00000485901 SLC25A5P05141 298 aaKnown RBP8.58□□□□□ -1.04
HLA-DOA-204ENST00000485901 NMBP08949 121 aa8.58□□□□□ -1.04
HLA-DOA-204ENST00000485901 GCHFRP30047 84 aa8.58□□□□□ -1.04
HLA-DOA-204ENST00000485901 EIF5AP63241 154 aaKnown RBP8.58□□□□□ -1.04
HLA-DOA-204ENST00000485901 TCTE3Q8IZS6 198 aa8.58□□□□□ -1.04
HLA-DOA-204ENST00000485901 SUN5Q8TC36 379 aa8.58□□□□□ -1.04
HLA-DOA-204ENST00000485901 HYLS1Q96M11 299 aa8.58□□□□□ -1.04
HLA-DOA-204ENST00000485901 VGLL1Q99990 258 aa8.58□□□□□ -1.04
HLA-DOA-204ENST00000485901 TMEM167BQ9NRX6 74 aa8.58□□□□□ -1.04
HLA-DOA-204ENST00000485901 ZNF492Q9P255 531 aa8.58□□□□□ -1.04
HLA-DOA-204ENST00000485901 TRBV7-9A0A0J9YWB2 115 aa8.57□□□□□ -1.04
HLA-DOA-204ENST00000485901 CTXND1A0A1B0GTU2 59 aa8.57□□□□□ -1.04
HLA-DOA-204ENST00000485901 DIRC3C9JPN6 131 aa8.57□□□□□ -1.04
HLA-DOA-204ENST00000485901 J3KRW8 73 aa8.57□□□□□ -1.04
HLA-DOA-204ENST00000485901 BCL2L11O43521 198 aa8.57□□□□□ -1.04
HLA-DOA-204ENST00000485901 PFDN1O60925 122 aa8.57□□□□□ -1.04
HLA-DOA-204ENST00000485901 SEC11BP0C7V7 166 aa8.57□□□□□ -1.04
HLA-DOA-204ENST00000485901 HTN1P15515 57 aa8.57□□□□□ -1.04
HLA-DOA-204ENST00000485901 ZNF138P52744 262 aa8.57□□□□□ -1.04
HLA-DOA-204ENST00000485901 KIR3DS1Q14943 382 aa8.57□□□□□ -1.04
HLA-DOA-204ENST00000485901 C12orf74Q32Q52 190 aa8.57□□□□□ -1.04
HLA-DOA-204ENST00000485901 GFI1BQ5VTD9 330 aa8.57□□□□□ -1.04
HLA-DOA-204ENST00000485901 TMUB2Q71RG4 321 aa8.57□□□□□ -1.04
HLA-DOA-204ENST00000485901 CCDC28AQ8IWP9 274 aa8.57□□□□□ -1.04
HLA-DOA-204ENST00000485901 FAM19A4Q96LR4 140 aa8.57□□□□□ -1.04
HLA-DOA-204ENST00000485901 NIPSNAP3BQ9BS92 247 aa8.57□□□□□ -1.04
HLA-DOA-204ENST00000485901 ZNF471Q9BX82 626 aaPredicted RBP8.57□□□□□ -1.04
HLA-DOA-204ENST00000485901 DKK2Q9UBU2 259 aa8.57□□□□□ -1.04
HLA-DOA-204ENST00000485901 CELA1Q9UNI1 258 aa8.57□□□□□ -1.04
HLA-DOA-204ENST00000485901 YTHDF2Q9Y5A9 579 aaKnown RBP8.57□□□□□ -1.04
HLA-DOA-204ENST00000485901 TRAV12-3A0A0B4J271 114 aa8.56□□□□□ -1.04
HLA-DOA-204ENST00000485901 C7orf71A4D174 169 aa8.56□□□□□ -1.04
HLA-DOA-204ENST00000485901 KLLNB2CW77 178 aa8.56□□□□□ -1.04
HLA-DOA-204ENST00000485901 PRM2P04554 102 aa8.56□□□□□ -1.04
HLA-DOA-204ENST00000485901 GPX1P07203 203 aa8.56□□□□□ -1.04
HLA-DOA-204ENST00000485901 CRISP2P16562 243 aa8.56□□□□□ -1.04
HLA-DOA-204ENST00000485901 AZU1P20160 251 aa8.56□□□□□ -1.04
HLA-DOA-204ENST00000485901 FAM222AQ5U5X8 452 aa8.56□□□□□ -1.04
HLA-DOA-204ENST00000485901 ZNF493Q6ZR52 646 aa8.56□□□□□ -1.04
HLA-DOA-204ENST00000485901 PKHD1P08F94 4074 aa8.56□□□□□ -1.04
HLA-DOA-204ENST00000485901 RYR1P21817 5038 aa8.56□□□□□ -1.04
HLA-DOA-204ENST00000485901 hCG_2014768A0A024R1R8 64 aa8.55□□□□□ -1.04
HLA-DOA-204ENST00000485901 TRAV10A0A0B4J240 114 aa8.55□□□□□ -1.04
HLA-DOA-204ENST00000485901 UMAD1C9J7I0 102 aa8.55□□□□□ -1.04
HLA-DOA-204ENST00000485901 C1QBP02746 253 aa8.55□□□□□ -1.04
HLA-DOA-204ENST00000485901 MED14OSP0DP75 135 aa8.55□□□□□ -1.04
HLA-DOA-204ENST00000485901 RNASE4P34096 147 aaKnown RBP8.55□□□□□ -1.04
HLA-DOA-204ENST00000485901 ZNF726P1Q15940 193 aa8.55□□□□□ -1.04
HLA-DOA-204ENST00000485901 Q6ZTC4 211 aa8.55□□□□□ -1.04
HLA-DOA-204ENST00000485901 IQCF2Q8IXL9 164 aa8.55□□□□□ -1.04
HLA-DOA-204ENST00000485901 TMED6Q8WW62 240 aa8.55□□□□□ -1.04
HLA-DOA-204ENST00000485901 C16orf74Q96GX8 76 aa8.55□□□□□ -1.04
HLA-DOA-204ENST00000485901 PYGO2Q9BRQ0 406 aa8.55□□□□□ -1.04
HLA-DOA-204ENST00000485901 APLNQ9ULZ1 77 aa8.55□□□□□ -1.04
HLA-DOA-204ENST00000485901 LENEPQ9Y5L5 61 aa8.55□□□□□ -1.04
HLA-DOA-204ENST00000485901 KIAA1109Q2LD37 5005 aa8.54□□□□□ -1.04
HLA-DOA-204ENST00000485901 SERTM2A0A1B0GWG4 89 aa8.54□□□□□ -1.04
HLA-DOA-204ENST00000485901 LYRM9A8MSI8 78 aa8.54□□□□□ -1.04
HLA-DOA-204ENST00000485901 ZNF324O75467 553 aaPredicted RBP8.54□□□□□ -1.04
HLA-DOA-204ENST00000485901 TPT1P13693 172 aaKnown RBP8.54□□□□□ -1.04
HLA-DOA-204ENST00000485901 SUMO1P63165 101 aaKnown RBP8.54□□□□□ -1.04
HLA-DOA-204ENST00000485901 CD300CQ08708 224 aa8.54□□□□□ -1.04
HLA-DOA-204ENST00000485901 LGALSLQ3ZCW2 172 aaPredicted RBP8.54□□□□□ -1.04
HLA-DOA-204ENST00000485901 GOLT1AQ6ZVE7 132 aa8.54□□□□□ -1.04
HLA-DOA-204ENST00000485901 ZNF767PQ75MW2 155 aa8.54□□□□□ -1.04
HLA-DOA-204ENST00000485901 SSX7Q7RTT5 188 aa8.54□□□□□ -1.04
HLA-DOA-204ENST00000485901 AKAP14Q86UN6 197 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms