RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 DEFB130AP0DP74 79 aa9.09□□□□□ -0.95
HDAC6-227ENST00000485102 BTF3P20290 206 aaKnown RBP9.09□□□□□ -0.95
HDAC6-227ENST00000485102 RAB5CP51148 216 aa9.09□□□□□ -0.95
HDAC6-227ENST00000485102 SPINK13Q1W4C9 94 aa9.09□□□□□ -0.95
HDAC6-227ENST00000485102 FFAR4Q5NUL3 377 aa9.09□□□□□ -0.95
HDAC6-227ENST00000485102 AKR1C8PQ5T2L2 129 aa9.09□□□□□ -0.95
HDAC6-227ENST00000485102 MIC13Q5XKP0 118 aa9.09□□□□□ -0.95
HDAC6-227ENST00000485102 TMUB2Q71RG4 321 aa9.09□□□□□ -0.95
HDAC6-227ENST00000485102 SLC51BQ86UW2 128 aa9.09□□□□□ -0.95
HDAC6-227ENST00000485102 ZNF471Q9BX82 626 aaPredicted RBP9.09□□□□□ -0.95
HDAC6-227ENST00000485102 SMLR1H3BR10 107 aa9.08□□□□□ -0.96
HDAC6-227ENST00000485102 SEC11BP0C7V7 166 aa9.08□□□□□ -0.96
HDAC6-227ENST00000485102 AZU1P20160 251 aa9.08□□□□□ -0.96
HDAC6-227ENST00000485102 GATA2P23769 480 aaPredicted RBP9.08□□□□□ -0.96
HDAC6-227ENST00000485102 TAS2R60P59551 318 aa9.08□□□□□ -0.96
HDAC6-227ENST00000485102 KHDC3LQ587J8 217 aa9.08□□□□□ -0.96
HDAC6-227ENST00000485102 DPPA3Q6W0C5 159 aa9.08□□□□□ -0.96
HDAC6-227ENST00000485102 HSD17B11Q8NBQ5 300 aa9.08□□□□□ -0.96
HDAC6-227ENST00000485102 OR11H4Q8NGC9 324 aa9.08□□□□□ -0.96
HDAC6-227ENST00000485102 STOML3Q8TAV4 291 aa9.08□□□□□ -0.96
HDAC6-227ENST00000485102 ZNF503Q96F45 646 aa9.08□□□□□ -0.96
HDAC6-227ENST00000485102 SLC25A22Q9H936 323 aa9.08□□□□□ -0.96
HDAC6-227ENST00000485102 TEX46H3BTG2 121 aa9.07□□□□□ -0.96
HDAC6-227ENST00000485102 BOLA2-SMG1P6H3BVE0 249 aa9.07□□□□□ -0.96
HDAC6-227ENST00000485102 NUDT3O95989 172 aa9.07□□□□□ -0.96
HDAC6-227ENST00000485102 ATP6V0CP27449 155 aa9.07□□□□□ -0.96
HDAC6-227ENST00000485102 RPL7L1Q6DKI1 246 aaKnown RBP9.07□□□□□ -0.96
HDAC6-227ENST00000485102 PQLC2Q6ZP29 291 aa9.07□□□□□ -0.96
HDAC6-227ENST00000485102 TMEM182Q6ZP80 229 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-227ENST00000485102 ZNF493Q6ZR52 646 aa9.07□□□□□ -0.96
HDAC6-227ENST00000485102 BAP18Q8IXM2 172 aa9.07□□□□□ -0.96
HDAC6-227ENST00000485102 RNF141Q8WVD5 230 aa9.07□□□□□ -0.96
HDAC6-227ENST00000485102 Q9H8V8 135 aa9.07□□□□□ -0.96
HDAC6-227ENST00000485102 WFDC1Q9HC57 220 aa9.07□□□□□ -0.96
HDAC6-227ENST00000485102 TMEM14CQ9P0S9 112 aa9.07□□□□□ -0.96
HDAC6-227ENST00000485102 FUT9Q9Y231 359 aa9.07□□□□□ -0.96
HDAC6-227ENST00000485102 TIMM8BQ9Y5J9 83 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-227ENST00000485102 A0A1B0GVG6 124 aa9.06□□□□□ -0.96
HDAC6-227ENST00000485102 A0A1W2PPQ1 181 aa9.06□□□□□ -0.96
HDAC6-227ENST00000485102 ZNF253O75346 499 aa9.06□□□□□ -0.96
HDAC6-227ENST00000485102 PDE6HQ13956 83 aa9.06□□□□□ -0.96
HDAC6-227ENST00000485102 LGALSLQ3ZCW2 172 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-227ENST00000485102 TTC32Q5I0X7 151 aa9.06□□□□□ -0.96
HDAC6-227ENST00000485102 LCN15Q6UWW0 184 aa9.06□□□□□ -0.96
HDAC6-227ENST00000485102 SSX7Q7RTT5 188 aa9.06□□□□□ -0.96
HDAC6-227ENST00000485102 OR8A1Q8NGG7 326 aa9.06□□□□□ -0.96
HDAC6-227ENST00000485102 OR10G4Q8NGN3 311 aa9.06□□□□□ -0.96
HDAC6-227ENST00000485102 OR10G9Q8NGN4 311 aa9.06□□□□□ -0.96
HDAC6-227ENST00000485102 OR10G7Q8NGN6 311 aa9.06□□□□□ -0.96
HDAC6-227ENST00000485102 LRRC20Q8TCA0 184 aa9.06□□□□□ -0.96
HDAC6-227ENST00000485102 TMEM37Q8WXS4 190 aa9.06□□□□□ -0.96
HDAC6-227ENST00000485102 PHYHIPLQ96FC7 376 aa9.06□□□□□ -0.96
HDAC6-227ENST00000485102 C16orf74Q96GX8 76 aa9.06□□□□□ -0.96
HDAC6-227ENST00000485102 LINC01587Q99440 93 aa9.06□□□□□ -0.96
HDAC6-227ENST00000485102 SLC50A1Q9BRV3 221 aa9.06□□□□□ -0.96
HDAC6-227ENST00000485102 UPK3BQ9BT76 320 aa9.06□□□□□ -0.96
HDAC6-227ENST00000485102 ACTR3CQ9C0K3 210 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-227ENST00000485102 A0A087X0K7 114 aa9.05□□□□□ -0.96
HDAC6-227ENST00000485102 RAB2AP61019 212 aa9.05□□□□□ -0.96
HDAC6-227ENST00000485102 SPATA12Q7Z6I5 190 aa9.05□□□□□ -0.96
HDAC6-227ENST00000485102 RNF182Q8N6D2 247 aa9.05□□□□□ -0.96
HDAC6-227ENST00000485102 LINC00612Q8N6U2 182 aa9.05□□□□□ -0.96
HDAC6-227ENST00000485102 RNASE8Q8TDE3 154 aaKnown RBP9.05□□□□□ -0.96
HDAC6-227ENST00000485102 C20orf144Q9BQM9 153 aa9.05□□□□□ -0.96
HDAC6-227ENST00000485102 Q9H3A6 140 aa9.05□□□□□ -0.96
HDAC6-227ENST00000485102 SCRT2Q9NQ03 307 aa9.05□□□□□ -0.96
HDAC6-227ENST00000485102 HERC1Q15751 4861 aa9.04□□□□□ -0.96
HDAC6-227ENST00000485102 TRAV12-2A0A075B6T6 113 aa9.04□□□□□ -0.96
HDAC6-227ENST00000485102 H3BNG1 76 aa9.04□□□□□ -0.96
HDAC6-227ENST00000485102 HIST1H1EP10412 219 aaKnown RBP9.04□□□□□ -0.96
HDAC6-227ENST00000485102 CDC34P49427 236 aaPredicted RBP9.04□□□□□ -0.96
HDAC6-227ENST00000485102 PSG3Q16557 428 aa9.04□□□□□ -0.96
HDAC6-227ENST00000485102 FAM74A1Q5RGS3 127 aa9.04□□□□□ -0.96
HDAC6-227ENST00000485102 IGFL4Q6B9Z1 124 aa9.04□□□□□ -0.96
HDAC6-227ENST00000485102 PATE2Q6UY27 113 aa9.04□□□□□ -0.96
HDAC6-227ENST00000485102 LYPD1Q8N2G4 141 aa9.04□□□□□ -0.96
HDAC6-227ENST00000485102 ZNF738Q8NE65 137 aa9.04□□□□□ -0.96
HDAC6-227ENST00000485102 OR10J6PQ8NGY7 276 aa9.04□□□□□ -0.96
HDAC6-227ENST00000485102 RXFP4Q8TDU9 374 aa9.04□□□□□ -0.96
HDAC6-227ENST00000485102 TMEM263Q8WUH6 116 aaKnown RBP9.04□□□□□ -0.96
HDAC6-227ENST00000485102 CYTL1Q9NRR1 136 aa9.04□□□□□ -0.96
HDAC6-227ENST00000485102 PRELID1Q9Y255 219 aa9.04□□□□□ -0.96
HDAC6-227ENST00000485102 CXorf1O96002 111 aa9.03□□□□□ -0.96
HDAC6-227ENST00000485102 CDKN1BP46527 198 aa9.03□□□□□ -0.96
HDAC6-227ENST00000485102 PPT1P50897 306 aa9.03□□□□□ -0.96
HDAC6-227ENST00000485102 UHRF2Q96PU4 802 aa9.03□□□□□ -0.96
HDAC6-227ENST00000485102 KRTAP1-5Q9BYS1 174 aa9.03□□□□□ -0.96
HDAC6-227ENST00000485102 OR51M1Q9H341 326 aa9.03□□□□□ -0.96
HDAC6-227ENST00000485102 AAMDCQ9H7C9 122 aa9.03□□□□□ -0.96
HDAC6-227ENST00000485102 TMEM167BQ9NRX6 74 aa9.03□□□□□ -0.96
HDAC6-227ENST00000485102 CTXND1A0A1B0GTU2 59 aa9.02□□□□□ -0.97
HDAC6-227ENST00000485102 H7BYZ3 331 aa9.02□□□□□ -0.97
HDAC6-227ENST00000485102 OR7C2O60412 319 aa9.02□□□□□ -0.97
HDAC6-227ENST00000485102 HIST1H1AQ02539 215 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-227ENST00000485102 C9orf62Q8N4C0 152 aa9.02□□□□□ -0.97
HDAC6-227ENST00000485102 PAXXQ9BUH6 204 aa9.02□□□□□ -0.97
HDAC6-227ENST00000485102 NKX6-2Q9C056 277 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-227ENST00000485102 NOP10Q9NPE3 64 aaKnown RBP9.02□□□□□ -0.97
HDAC6-227ENST00000485102 DMBT1Q9UGM3 2413 aaPredicted RBP9.01□□□□□ -0.97
HDAC6-227ENST00000485102 MRPS12O15235 138 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms