RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 C1orf158Q8N1D5 194 aa5.65□□□□□ -1.5
MACF1-220ENST00000485063 RPP25LQ8N5L8 163 aaKnown RBP5.65□□□□□ -1.5
MACF1-220ENST00000485063 RXFP4Q8TDU9 374 aa5.65□□□□□ -1.5
MACF1-220ENST00000485063 PHLDA1Q8WV24 401 aaPredicted RBP5.65□□□□□ -1.5
MACF1-220ENST00000485063 PHYHIPLQ96FC7 376 aa5.65□□□□□ -1.5
MACF1-220ENST00000485063 ODF3Q96PU9 254 aa5.65□□□□□ -1.5
MACF1-220ENST00000485063 LINC01587Q99440 93 aa5.65□□□□□ -1.5
MACF1-220ENST00000485063 Q9H3A6 140 aa5.65□□□□□ -1.5
MACF1-220ENST00000485063 LOC102723971A0A1B0GUV8 181 aa5.64□□□□□ -1.51
MACF1-220ENST00000485063 PGPA6NDG6 321 aa5.64□□□□□ -1.51
MACF1-220ENST00000485063 G3V3Q6 166 aa5.64□□□□□ -1.51
MACF1-220ENST00000485063 CRXO43186 299 aaPredicted RBP5.64□□□□□ -1.51
MACF1-220ENST00000485063 PFDN1O60925 122 aa5.64□□□□□ -1.51
MACF1-220ENST00000485063 CXorf1O96002 111 aa5.64□□□□□ -1.51
MACF1-220ENST00000485063 STAG3L2P0CL84 134 aa5.64□□□□□ -1.51
MACF1-220ENST00000485063 STAG3L3P0CL85 134 aa5.64□□□□□ -1.51
MACF1-220ENST00000485063 ARL14EPLP0DKL9 152 aa5.64□□□□□ -1.51
MACF1-220ENST00000485063 EMP1P54849 157 aa5.64□□□□□ -1.51
MACF1-220ENST00000485063 NANOS2P60321 138 aaKnown RBP5.64□□□□□ -1.51
MACF1-220ENST00000485063 CEMP1Q6PRD7 247 aaPredicted RBP5.64□□□□□ -1.51
MACF1-220ENST00000485063 C9orf47Q6ZRZ4 202 aa5.64□□□□□ -1.51
MACF1-220ENST00000485063 CCDC28AQ8IWP9 274 aa5.64□□□□□ -1.51
MACF1-220ENST00000485063 IQCF2Q8IXL9 164 aa5.64□□□□□ -1.51
MACF1-220ENST00000485063 KCNRGQ8N5I3 272 aa5.64□□□□□ -1.51
MACF1-220ENST00000485063 RAB24Q969Q5 203 aa5.64□□□□□ -1.51
MACF1-220ENST00000485063 ZNF503Q96F45 646 aa5.64□□□□□ -1.51
MACF1-220ENST00000485063 HYLS1Q96M11 299 aa5.64□□□□□ -1.51
MACF1-220ENST00000485063 NIPSNAP3BQ9BS92 247 aa5.64□□□□□ -1.51
MACF1-220ENST00000485063 SH3BGRL3Q9H299 93 aa5.64□□□□□ -1.51
MACF1-220ENST00000485063 OTORQ9NRC9 128 aa5.64□□□□□ -1.51
MACF1-220ENST00000485063 TMEM167BQ9NRX6 74 aa5.64□□□□□ -1.51
MACF1-220ENST00000485063 TRAV10A0A0B4J240 114 aa5.63□□□□□ -1.51
MACF1-220ENST00000485063 CTXND1A0A1B0GTU2 59 aa5.63□□□□□ -1.51
MACF1-220ENST00000485063 RBAKDNA6NC62 111 aa5.63□□□□□ -1.51
MACF1-220ENST00000485063 H7BYZ3 331 aa5.63□□□□□ -1.51
MACF1-220ENST00000485063 J3KRW8 73 aa5.63□□□□□ -1.51
MACF1-220ENST00000485063 K7EQM0 130 aa5.63□□□□□ -1.51
MACF1-220ENST00000485063 SLC25A5P05141 298 aaKnown RBP5.63□□□□□ -1.51
MACF1-220ENST00000485063 GPX1P07203 203 aa5.63□□□□□ -1.51
MACF1-220ENST00000485063 CT45A10P0DMU9 189 aa5.63□□□□□ -1.51
MACF1-220ENST00000485063 HTN1P15515 57 aa5.63□□□□□ -1.51
MACF1-220ENST00000485063 TAS2R60P59551 318 aa5.63□□□□□ -1.51
MACF1-220ENST00000485063 ERCC8Q13216 396 aa5.63□□□□□ -1.51
MACF1-220ENST00000485063 Q6ZNX1 250 aa5.63□□□□□ -1.51
MACF1-220ENST00000485063 ARL6IP6Q8N6S5 226 aa5.63□□□□□ -1.51
MACF1-220ENST00000485063 STOML3Q8TAV4 291 aa5.63□□□□□ -1.51
MACF1-220ENST00000485063 C2CD4CQ8TF44 421 aa5.63□□□□□ -1.51
MACF1-220ENST00000485063 C16orf74Q96GX8 76 aa5.63□□□□□ -1.51
MACF1-220ENST00000485063 ZNF471Q9BX82 626 aaPredicted RBP5.63□□□□□ -1.51
MACF1-220ENST00000485063 RPH3ALQ9UNE2 315 aa5.63□□□□□ -1.51
MACF1-220ENST00000485063 IGKV2-40A0A087WW87 121 aaPredicted RBP5.62□□□□□ -1.51
MACF1-220ENST00000485063 TRAV12-3A0A0B4J271 114 aa5.62□□□□□ -1.51
MACF1-220ENST00000485063 SERTM2A0A1B0GWG4 89 aa5.62□□□□□ -1.51
MACF1-220ENST00000485063 C7orf71A4D174 169 aa5.62□□□□□ -1.51
MACF1-220ENST00000485063 ZNF705GA8MUZ8 300 aaPredicted RBP5.62□□□□□ -1.51
MACF1-220ENST00000485063 DIRC3C9JPN6 131 aa5.62□□□□□ -1.51
MACF1-220ENST00000485063 BCL2L11O43521 198 aa5.62□□□□□ -1.51
MACF1-220ENST00000485063 EIF3GO75821 320 aaKnown RBP eCLIP5.62□□□□□ -1.51
MACF1-220ENST00000485063 IGKV2D-40P01614 121 aaPredicted RBP5.62□□□□□ -1.51
MACF1-220ENST00000485063 NMBP08949 121 aa5.62□□□□□ -1.51
MACF1-220ENST00000485063 SEC11BP0C7V7 166 aa5.62□□□□□ -1.51
MACF1-220ENST00000485063 TPT1P13693 172 aaKnown RBP5.62□□□□□ -1.51
MACF1-220ENST00000485063 GCHFRP30047 84 aa5.62□□□□□ -1.51
MACF1-220ENST00000485063 ZNF138P52744 262 aa5.62□□□□□ -1.51
MACF1-220ENST00000485063 TCTAP57738 103 aa5.62□□□□□ -1.51
MACF1-220ENST00000485063 FAM222AQ5U5X8 452 aa5.62□□□□□ -1.51
MACF1-220ENST00000485063 GFI1BQ5VTD9 330 aa5.62□□□□□ -1.51
MACF1-220ENST00000485063 ZNF493Q6ZR52 646 aa5.62□□□□□ -1.51
MACF1-220ENST00000485063 TCTE3Q8IZS6 198 aa5.62□□□□□ -1.51
MACF1-220ENST00000485063 OR11H4Q8NGC9 324 aa5.62□□□□□ -1.51
MACF1-220ENST00000485063 PYGO2Q9BRQ0 406 aa5.62□□□□□ -1.51
MACF1-220ENST00000485063 AGPAT4-IT1Q9H0P7 198 aa5.62□□□□□ -1.51
MACF1-220ENST00000485063 CYTL1Q9NRR1 136 aa5.62□□□□□ -1.51
MACF1-220ENST00000485063 ZNF492Q9P255 531 aa5.62□□□□□ -1.51
MACF1-220ENST00000485063 YTHDF2Q9Y5A9 579 aaKnown RBP5.62□□□□□ -1.51
MACF1-220ENST00000485063 TENM3Q9P273 2699 aa5.62□□□□□ -1.51
MACF1-220ENST00000485063 NBEAL2Q6ZNJ1 2754 aa5.62□□□□□ -1.51
MACF1-220ENST00000485063 DNAH9Q9NYC9 4486 aa5.62□□□□□ -1.51
MACF1-220ENST00000485063 hCG_2014768A0A024R1R8 64 aa5.61□□□□□ -1.51
MACF1-220ENST00000485063 DEFB131BA0A096LNP1 70 aa5.61□□□□□ -1.51
MACF1-220ENST00000485063 TRBV7-9A0A0J9YWB2 115 aa5.61□□□□□ -1.51
MACF1-220ENST00000485063 LYRM9A8MSI8 78 aa5.61□□□□□ -1.51
MACF1-220ENST00000485063 SNURFLB1AK76 121 aa5.61□□□□□ -1.51
MACF1-220ENST00000485063 UMAD1C9J7I0 102 aa5.61□□□□□ -1.51
MACF1-220ENST00000485063 RNASE4P34096 147 aaKnown RBP5.61□□□□□ -1.51
MACF1-220ENST00000485063 DAD1P61803 113 aa5.61□□□□□ -1.51
MACF1-220ENST00000485063 EIF5AL1Q6IS14 154 aaKnown RBP5.61□□□□□ -1.51
MACF1-220ENST00000485063 Q6ZTC4 211 aa5.61□□□□□ -1.51
MACF1-220ENST00000485063 TMUB2Q71RG4 321 aa5.61□□□□□ -1.51
MACF1-220ENST00000485063 AKAP14Q86UN6 197 aa5.61□□□□□ -1.51
MACF1-220ENST00000485063 TMEM263Q8WUH6 116 aaKnown RBP5.61□□□□□ -1.51
MACF1-220ENST00000485063 ST6GAL2Q96JF0 529 aa5.61□□□□□ -1.51
MACF1-220ENST00000485063 VGLL1Q99990 258 aa5.61□□□□□ -1.51
MACF1-220ENST00000485063 NDFIP1Q9BT67 221 aa5.61□□□□□ -1.51
MACF1-220ENST00000485063 DKK2Q9UBU2 259 aa5.61□□□□□ -1.51
MACF1-220ENST00000485063 CELA1Q9UNI1 258 aa5.61□□□□□ -1.51
MACF1-220ENST00000485063 TIMM8BQ9Y5J9 83 aaPredicted RBP5.61□□□□□ -1.51
MACF1-220ENST00000485063 LENEPQ9Y5L5 61 aa5.61□□□□□ -1.51
MACF1-220ENST00000485063 LCE6AA0A183 80 aa5.6□□□□□ -1.51
MACF1-220ENST00000485063 A0A1W2PRE2 83 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms