RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 J3QQQ9 107 aa3.95□□□□□ -1.78
CCDC39-205ENST00000485055 UPK1BO75841 260 aa3.95□□□□□ -1.78
CCDC39-205ENST00000485055 ZNF93P35789 620 aaPredicted RBP3.95□□□□□ -1.78
CCDC39-205ENST00000485055 INSL3P51460 131 aa3.95□□□□□ -1.78
CCDC39-205ENST00000485055 SCGB1D4Q6XE38 83 aa3.95□□□□□ -1.78
CCDC39-205ENST00000485055 OR2T10Q8NGZ9 312 aa3.95□□□□□ -1.78
CCDC39-205ENST00000485055 RTN4IP1Q8WWV3 396 aaPredicted RBP3.95□□□□□ -1.78
CCDC39-205ENST00000485055 GPR146Q96CH1 333 aa3.95□□□□□ -1.78
CCDC39-205ENST00000485055 PHYHIPLQ96FC7 376 aa3.95□□□□□ -1.78
CCDC39-205ENST00000485055 AP1S3Q96PC3 154 aa3.95□□□□□ -1.78
CCDC39-205ENST00000485055 TAS2R4Q9NYW5 299 aa3.95□□□□□ -1.78
CCDC39-205ENST00000485055 XCL2Q9UBD3 114 aa3.95□□□□□ -1.78
CCDC39-205ENST00000485055 IGHV1-3A0A0C4DH29 117 aa3.95□□□□□ -1.78
CCDC39-205ENST00000485055 ISLRO14498 428 aa3.95□□□□□ -1.78
CCDC39-205ENST00000485055 CT45A10P0DMU9 189 aa3.95□□□□□ -1.78
CCDC39-205ENST00000485055 LPAR6P43657 344 aa3.95□□□□□ -1.78
CCDC39-205ENST00000485055 DAD1P61803 113 aa3.95□□□□□ -1.78
CCDC39-205ENST00000485055 FOXI1Q12951 378 aa3.95□□□□□ -1.78
CCDC39-205ENST00000485055 Q8N9W7 124 aa3.95□□□□□ -1.78
CCDC39-205ENST00000485055 MRPL30Q8TCC3 161 aaKnown RBP3.95□□□□□ -1.78
CCDC39-205ENST00000485055 TMEM106AQ96A25 262 aa3.95□□□□□ -1.78
CCDC39-205ENST00000485055 SPANXCQ9NY87 97 aa3.95□□□□□ -1.78
CCDC39-205ENST00000485055 IL36RNQ9UBH0 155 aa3.95□□□□□ -1.78
CCDC39-205ENST00000485055 CKLFQ9UBR5 152 aa3.95□□□□□ -1.78
CCDC39-205ENST00000485055 IGHV3-64DA0A0J9YX35 117 aa3.94□□□□□ -1.78
CCDC39-205ENST00000485055 A0A1B0GV50 99 aa3.94□□□□□ -1.78
CCDC39-205ENST00000485055 GABARAPH6UMI1 98 aa3.94□□□□□ -1.78
CCDC39-205ENST00000485055 TFF1P04155 84 aa3.94□□□□□ -1.78
CCDC39-205ENST00000485055 SCTP09683 121 aa3.94□□□□□ -1.78
CCDC39-205ENST00000485055 GADD45AP24522 165 aa3.94□□□□□ -1.78
CCDC39-205ENST00000485055 MEF2BQ02080 365 aaPredicted RBP3.94□□□□□ -1.78
CCDC39-205ENST00000485055 ZNF660Q6AZW8 331 aaPredicted RBP3.94□□□□□ -1.78
CCDC39-205ENST00000485055 GTF2H5Q6ZYL4 71 aa3.94□□□□□ -1.78
CCDC39-205ENST00000485055 SLC35E3Q7Z769 313 aa3.94□□□□□ -1.78
CCDC39-205ENST00000485055 C4orf3Q8WVX3 66 aa3.94□□□□□ -1.78
CCDC39-205ENST00000485055 SLC35E1Q96K37 410 aa3.94□□□□□ -1.78
CCDC39-205ENST00000485055 C11orf68Q9H3H3 251 aaKnown RBP3.94□□□□□ -1.78
CCDC39-205ENST00000485055 IGLV5-45A0A087WSX0 123 aa3.94□□□□□ -1.78
CCDC39-205ENST00000485055 OVOL1O14753 267 aa3.94□□□□□ -1.78
CCDC39-205ENST00000485055 AKAIN1P0CW23 69 aa3.94□□□□□ -1.78
CCDC39-205ENST00000485055 CD28P10747 220 aa3.94□□□□□ -1.78
CCDC39-205ENST00000485055 PSMB8P28062 276 aa3.94□□□□□ -1.78
CCDC39-205ENST00000485055 TAS2R20P59543 309 aa3.94□□□□□ -1.78
CCDC39-205ENST00000485055 FAM74A1Q5RGS3 127 aa3.94□□□□□ -1.78
CCDC39-205ENST00000485055 ZNF695Q8IW36 515 aa3.94□□□□□ -1.78
CCDC39-205ENST00000485055 DRAM1Q8N682 238 aa3.94□□□□□ -1.78
CCDC39-205ENST00000485055 MEGF8Q7Z7M0 2845 aa3.94□□□□□ -1.78
CCDC39-205ENST00000485055 TRAV39A0A0B4J263 110 aa3.93□□□□□ -1.78
CCDC39-205ENST00000485055 MCRIP1C9JLW8 97 aa3.93□□□□□ -1.78
CCDC39-205ENST00000485055 TRBV12-3P01733 135 aa3.93□□□□□ -1.78
CCDC39-205ENST00000485055 SLURP1P55000 103 aa3.93□□□□□ -1.78
CCDC39-205ENST00000485055 EDDM3BP56851 147 aa3.93□□□□□ -1.78
CCDC39-205ENST00000485055 HERVK_113P63121 156 aa3.93□□□□□ -1.78
CCDC39-205ENST00000485055 RHOGP84095 191 aa3.93□□□□□ -1.78
CCDC39-205ENST00000485055 HSD52Q0P140 79 aa3.93□□□□□ -1.78
CCDC39-205ENST00000485055 OR4X2Q8NGF9 303 aa3.93□□□□□ -1.78
CCDC39-205ENST00000485055 RBPMSQ93062 196 aaKnown RBP3.93□□□□□ -1.78
CCDC39-205ENST00000485055 DERL1Q9BUN8 251 aa3.93□□□□□ -1.78
CCDC39-205ENST00000485055 KRBOX1C9JBD0 128 aa3.93□□□□□ -1.78
CCDC39-205ENST00000485055 XAF1Q6GPH4 301 aa3.93□□□□□ -1.78
CCDC39-205ENST00000485055 OR5AP2Q8NGF4 316 aa3.93□□□□□ -1.78
CCDC39-205ENST00000485055 PRAC1Q96KF2 57 aa3.93□□□□□ -1.78
CCDC39-205ENST00000485055 ZNF184Q99676 751 aaPredicted RBP3.93□□□□□ -1.78
CCDC39-205ENST00000485055 NAT8Q9UHE5 227 aa3.93□□□□□ -1.78
CCDC39-205ENST00000485055 TPRKBQ9Y3C4 175 aa3.93□□□□□ -1.78
CCDC39-205ENST00000485055 STAB1Q9NY15 2570 aa3.93□□□□□ -1.78
CCDC39-205ENST00000485055 IGHV3OR16-13A0A075B7E8 117 aa3.92□□□□□ -1.78
CCDC39-205ENST00000485055 IGLV5-52A0A0A0MRZ9 124 aa3.92□□□□□ -1.78
CCDC39-205ENST00000485055 TRDV1A0A1B0GX56 115 aa3.92□□□□□ -1.78
CCDC39-205ENST00000485055 AGPAT2O15120 278 aa3.92□□□□□ -1.78
CCDC39-205ENST00000485055 GZMBP10144 247 aa3.92□□□□□ -1.78
CCDC39-205ENST00000485055 CRHBPP24387 322 aa3.92□□□□□ -1.78
CCDC39-205ENST00000485055 S100A2P29034 98 aa3.92□□□□□ -1.78
CCDC39-205ENST00000485055 MEIG1Q5JSS6 88 aa3.92□□□□□ -1.78
CCDC39-205ENST00000485055 TMEM91Q6ZNR0 172 aa3.92□□□□□ -1.78
CCDC39-205ENST00000485055 LHFPL1Q86WI0 220 aa3.92□□□□□ -1.78
CCDC39-205ENST00000485055 C5orf17Q8NAS9 161 aa3.92□□□□□ -1.78
CCDC39-205ENST00000485055 DEDD2Q8WXF8 326 aa3.92□□□□□ -1.78
CCDC39-205ENST00000485055 NABP2Q9BQ15 211 aa3.92□□□□□ -1.78
CCDC39-205ENST00000485055 PAXXQ9BUH6 204 aa3.92□□□□□ -1.78
CCDC39-205ENST00000485055 OTORQ9NRC9 128 aa3.92□□□□□ -1.78
CCDC39-205ENST00000485055 TRAV4A0A0B4J268 109 aa3.92□□□□□ -1.78
CCDC39-205ENST00000485055 LOC389332A0A1B0GUA5 103 aa3.92□□□□□ -1.78
CCDC39-205ENST00000485055 FAM236AA0A1B0GUQ0 79 aa3.92□□□□□ -1.78
CCDC39-205ENST00000485055 FAM236BA0A1B0GV22 79 aa3.92□□□□□ -1.78
CCDC39-205ENST00000485055 IFITM5A6NNB3 132 aa3.92□□□□□ -1.78
CCDC39-205ENST00000485055 AIPO00170 330 aa3.92□□□□□ -1.78
CCDC39-205ENST00000485055 SDCBPO00560 298 aaPredicted RBP3.92□□□□□ -1.78
CCDC39-205ENST00000485055 GEMIN2O14893 280 aaKnown RBP3.92□□□□□ -1.78
CCDC39-205ENST00000485055 COX7A1P24310 79 aa3.92□□□□□ -1.78
CCDC39-205ENST00000485055 BLCAPP62952 87 aa3.92□□□□□ -1.78
CCDC39-205ENST00000485055 ERCC8Q13216 396 aa3.92□□□□□ -1.78
CCDC39-205ENST00000485055 PIGYQ3MUY2 71 aa3.92□□□□□ -1.78
CCDC39-205ENST00000485055 NDUFB11Q9NX14 153 aa3.92□□□□□ -1.78
CCDC39-205ENST00000485055 ZNF706Q9Y5V0 76 aaPredicted RBP3.92□□□□□ -1.78
CCDC39-205ENST00000485055 KRTAP23-1A1A580 65 aa3.92□□□□□ -1.78
CCDC39-205ENST00000485055 PMP2P02689 132 aa3.92□□□□□ -1.78
CCDC39-205ENST00000485055 GATA2P23769 480 aaPredicted RBP3.92□□□□□ -1.78
CCDC39-205ENST00000485055 GNG4P50150 75 aa3.92□□□□□ -1.78
CCDC39-205ENST00000485055 ZNF138P52744 262 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms