RNA–Protein interactions for RNA: ENST00000484874.2

CNKSR1-208, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 3

Gene CNKSR1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-208ENST00000484874 DPPA3Q6W0C5 159 aa13.05□□□□□ -0.32
CNKSR1-208ENST00000484874 PLA2G2EQ9NZK7 142 aa13.05□□□□□ -0.32
CNKSR1-208ENST00000484874 TRAV12-2A0A075B6T6 113 aa13.04□□□□□ -0.32
CNKSR1-208ENST00000484874 IGHV3OR16-12A0A075B7B8 117 aa13.04□□□□□ -0.32
CNKSR1-208ENST00000484874 CASC10Q5T4H9 136 aa13.04□□□□□ -0.32
CNKSR1-208ENST00000484874 EIF5AL1Q6IS14 154 aaKnown RBP13.04□□□□□ -0.32
CNKSR1-208ENST00000484874 CMTM2Q8TAZ6 248 aa13.04□□□□□ -0.32
CNKSR1-208ENST00000484874 VGLL1Q99990 258 aa13.04□□□□□ -0.32
CNKSR1-208ENST00000484874 TMEM208Q9BTX3 173 aa13.04□□□□□ -0.32
CNKSR1-208ENST00000484874 ZNF492Q9P255 531 aa13.04□□□□□ -0.32
CNKSR1-208ENST00000484874 IGKV2-40A0A087WW87 121 aaPredicted RBP13.03□□□□□ -0.32
CNKSR1-208ENST00000484874 A0A1W2PRE2 83 aa13.03□□□□□ -0.32
CNKSR1-208ENST00000484874 DEFB4AO15263 64 aa13.03□□□□□ -0.32
CNKSR1-208ENST00000484874 IGKV2D-40P01614 121 aaPredicted RBP13.03□□□□□ -0.32
CNKSR1-208ENST00000484874 HBE1P02100 147 aa13.03□□□□□ -0.32
CNKSR1-208ENST00000484874 CRISP2P16562 243 aa13.03□□□□□ -0.32
CNKSR1-208ENST00000484874 ZNF138P52744 262 aa13.03□□□□□ -0.32
CNKSR1-208ENST00000484874 RRN3P1Q2M238 152 aa13.03□□□□□ -0.32
CNKSR1-208ENST00000484874 SLC51BQ86UW2 128 aa13.03□□□□□ -0.32
CNKSR1-208ENST00000484874 TMED6Q8WW62 240 aa13.03□□□□□ -0.32
CNKSR1-208ENST00000484874 MBD3L1Q8WWY6 194 aa13.03□□□□□ -0.32
CNKSR1-208ENST00000484874 LENEPQ9Y5L5 61 aa13.03□□□□□ -0.32
CNKSR1-208ENST00000484874 DNAH7Q8WXX0 4024 aa13.03□□□□□ -0.32
CNKSR1-208ENST00000484874 KLLNB2CW77 178 aa13.02□□□□□ -0.33
CNKSR1-208ENST00000484874 CD300CQ08708 224 aa13.02□□□□□ -0.33
CNKSR1-208ENST00000484874 ZFP69Q49AA0 526 aa13.02□□□□□ -0.33
CNKSR1-208ENST00000484874 C11orf45Q8TAV5 145 aa13.02□□□□□ -0.33
CNKSR1-208ENST00000484874 NKX6-2Q9C056 277 aaPredicted RBP13.02□□□□□ -0.33
CNKSR1-208ENST00000484874 SERTM2A0A1B0GWG4 89 aa13.01□□□□□ -0.33
CNKSR1-208ENST00000484874 MAP1LC3B2A6NCE7 125 aa13.01□□□□□ -0.33
CNKSR1-208ENST00000484874 H7BYZ3 331 aa13.01□□□□□ -0.33
CNKSR1-208ENST00000484874 RAB5CP51148 216 aa13.01□□□□□ -0.33
CNKSR1-208ENST00000484874 TAS2R60P59551 318 aa13.01□□□□□ -0.33
CNKSR1-208ENST00000484874 SUMO1P63165 101 aaKnown RBP13.01□□□□□ -0.33
CNKSR1-208ENST00000484874 KIR3DS1Q14943 382 aa13.01□□□□□ -0.33
CNKSR1-208ENST00000484874 C5orf17Q8NAS9 161 aa13.01□□□□□ -0.33
CNKSR1-208ENST00000484874 LINC01587Q99440 93 aa13.01□□□□□ -0.33
CNKSR1-208ENST00000484874 MAP1LC3BQ9GZQ8 125 aa13.01□□□□□ -0.33
CNKSR1-208ENST00000484874 FHITP49789 147 aa13□□□□□ -0.33
CNKSR1-208ENST00000484874 GFI1BQ5VTD9 330 aa13□□□□□ -0.33
CNKSR1-208ENST00000484874 C9orf62Q8N4C0 152 aa13□□□□□ -0.33
CNKSR1-208ENST00000484874 TMPRSS5Q9H3S3 457 aa13□□□□□ -0.33
CNKSR1-208ENST00000484874 CXorf65A6NEN9 183 aa12.99□□□□□ -0.33
CNKSR1-208ENST00000484874 ZNF324O75467 553 aaPredicted RBP12.99□□□□□ -0.33
CNKSR1-208ENST00000484874 FGF8P55075 233 aaPredicted RBP12.99□□□□□ -0.33
CNKSR1-208ENST00000484874 ZFAND2AQ8N6M9 145 aa12.99□□□□□ -0.33
CNKSR1-208ENST00000484874 EPDR1Q9UM22 224 aa12.99□□□□□ -0.33
CNKSR1-208ENST00000484874 LOC102723971A0A1B0GUV8 181 aa12.98□□□□□ -0.33
CNKSR1-208ENST00000484874 C7orf71A4D174 169 aa12.98□□□□□ -0.33
CNKSR1-208ENST00000484874 ZNF705GA8MUZ8 300 aaPredicted RBP12.98□□□□□ -0.33
CNKSR1-208ENST00000484874 GPX1P07203 203 aa12.98□□□□□ -0.33
CNKSR1-208ENST00000484874 ZFAND6Q6FIF0 208 aa12.98□□□□□ -0.33
CNKSR1-208ENST00000484874 ZNF493Q6ZR52 646 aa12.98□□□□□ -0.33
CNKSR1-208ENST00000484874 GOLT1AQ6ZVE7 132 aa12.98□□□□□ -0.33
CNKSR1-208ENST00000484874 IQCF2Q8IXL9 164 aa12.98□□□□□ -0.33
CNKSR1-208ENST00000484874 FAM213BQ8TBF2 198 aa12.98□□□□□ -0.33
CNKSR1-208ENST00000484874 SFT2D1Q8WV19 159 aa12.98□□□□□ -0.33
CNKSR1-208ENST00000484874 NIPSNAP3BQ9BS92 247 aa12.98□□□□□ -0.33
CNKSR1-208ENST00000484874 ARL2-SNX15V9GYD0 113 aa12.98□□□□□ -0.33
CNKSR1-208ENST00000484874 TRAV12-3A0A0B4J271 114 aa12.97□□□□□ -0.33
CNKSR1-208ENST00000484874 TEX48A0A1B0GUV7 120 aa12.97□□□□□ -0.33
CNKSR1-208ENST00000484874 FBLL1A6NHQ2 334 aaKnown RBP12.97□□□□□ -0.33
CNKSR1-208ENST00000484874 FAM74A7A6NL05 159 aa12.97□□□□□ -0.33
CNKSR1-208ENST00000484874 GGTLC3B5MD39 225 aa12.97□□□□□ -0.33
CNKSR1-208ENST00000484874 K7EQM0 130 aa12.97□□□□□ -0.33
CNKSR1-208ENST00000484874 TCRAP04437 139 aa12.97□□□□□ -0.33
CNKSR1-208ENST00000484874 SPART-AS1P0CW21 52 aa12.97□□□□□ -0.33
CNKSR1-208ENST00000484874 NANOS2P60321 138 aaKnown RBP12.97□□□□□ -0.33
CNKSR1-208ENST00000484874 PYGO2Q9BRQ0 406 aa12.97□□□□□ -0.33
CNKSR1-208ENST00000484874 LINC00467Q9BRT7 94 aa12.97□□□□□ -0.33
CNKSR1-208ENST00000484874 H2AFB1P0C5Y9 115 aa12.96□□□□□ -0.33
CNKSR1-208ENST00000484874 AZU1P20160 251 aa12.96□□□□□ -0.33
CNKSR1-208ENST00000484874 RNASE4P34096 147 aaKnown RBP12.96□□□□□ -0.33
CNKSR1-208ENST00000484874 SULT1A2P50226 295 aa12.96□□□□□ -0.33
CNKSR1-208ENST00000484874 CEMP1Q6PRD7 247 aaPredicted RBP12.96□□□□□ -0.33
CNKSR1-208ENST00000484874 DKK2Q9UBU2 259 aa12.96□□□□□ -0.33
CNKSR1-208ENST00000484874 YTHDF2Q9Y5A9 579 aaKnown RBP12.96□□□□□ -0.33
CNKSR1-208ENST00000484874 TRAV1-1A0A0B4J248 108 aa12.95□□□□□ -0.34
CNKSR1-208ENST00000484874 NUPR2A6NF83 97 aa12.95□□□□□ -0.34
CNKSR1-208ENST00000484874 J3KRW8 73 aa12.95□□□□□ -0.34
CNKSR1-208ENST00000484874 PRM2P04554 102 aa12.95□□□□□ -0.34
CNKSR1-208ENST00000484874 GNG5P63218 68 aa12.95□□□□□ -0.34
CNKSR1-208ENST00000484874 CCDC28AQ8IWP9 274 aa12.95□□□□□ -0.34
CNKSR1-208ENST00000484874 PHLDA1Q8WV24 401 aaPredicted RBP12.95□□□□□ -0.34
CNKSR1-208ENST00000484874 ATG101Q9BSB4 218 aa12.95□□□□□ -0.34
CNKSR1-208ENST00000484874 RPH3ALQ9UNE2 315 aa12.95□□□□□ -0.34
CNKSR1-208ENST00000484874 CSMD3Q7Z407 3707 aa12.95□□□□□ -0.34
CNKSR1-208ENST00000484874 C11orf94C9JXX5 98 aa12.94□□□□□ -0.34
CNKSR1-208ENST00000484874 PPT1P50897 306 aa12.94□□□□□ -0.34
CNKSR1-208ENST00000484874 EMP1P54849 157 aa12.94□□□□□ -0.34
CNKSR1-208ENST00000484874 BTN1A1Q13410 526 aa12.94□□□□□ -0.34
CNKSR1-208ENST00000484874 C12orf74Q32Q52 190 aa12.94□□□□□ -0.34
CNKSR1-208ENST00000484874 CYB561D1Q8N8Q1 229 aa12.94□□□□□ -0.34
CNKSR1-208ENST00000484874 Q8TAT8 98 aa12.94□□□□□ -0.34
CNKSR1-208ENST00000484874 TMEM263Q8WUH6 116 aaKnown RBP12.94□□□□□ -0.34
CNKSR1-208ENST00000484874 HIST1H2BAQ96A08 127 aa12.94□□□□□ -0.34
CNKSR1-208ENST00000484874 C16orf74Q96GX8 76 aa12.94□□□□□ -0.34
CNKSR1-208ENST00000484874 TCEAL7Q9BRU2 100 aa12.94□□□□□ -0.34
CNKSR1-208ENST00000484874 CELA1Q9UNI1 258 aa12.94□□□□□ -0.34
CNKSR1-208ENST00000484874 PLAC8L1A1L4L8 177 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms