RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 LENEPQ9Y5L5 61 aa5.68□□□□□ -1.5
SHROOM3-206ENST00000484236 TRAV8-2A0A0B4J237 113 aa5.67□□□□□ -1.5
SHROOM3-206ENST00000484236 IGHV3-35A0A0C4DH35 117 aa5.67□□□□□ -1.5
SHROOM3-206ENST00000484236 C2orf70A6NJV1 201 aa5.67□□□□□ -1.5
SHROOM3-206ENST00000484236 M0R143 59 aa5.67□□□□□ -1.5
SHROOM3-206ENST00000484236 IGLV1-40P01703 118 aa5.67□□□□□ -1.5
SHROOM3-206ENST00000484236 COX6B1P14854 86 aa5.67□□□□□ -1.5
SHROOM3-206ENST00000484236 CD33P20138 364 aa5.67□□□□□ -1.5
SHROOM3-206ENST00000484236 ZNF138P52744 262 aa5.67□□□□□ -1.5
SHROOM3-206ENST00000484236 TMEM78Q5T7P6 136 aa5.67□□□□□ -1.5
SHROOM3-206ENST00000484236 SAMD13Q5VXD3 122 aa5.67□□□□□ -1.5
SHROOM3-206ENST00000484236 FAM104BQ5XKR9 115 aa5.67□□□□□ -1.5
SHROOM3-206ENST00000484236 C8orf86Q6ZUL3 223 aa5.67□□□□□ -1.5
SHROOM3-206ENST00000484236 FER1L6-AS1Q8NA97 138 aa5.67□□□□□ -1.5
SHROOM3-206ENST00000484236 GLMPQ8WWB7 406 aa5.67□□□□□ -1.5
SHROOM3-206ENST00000484236 TMEM70Q9BUB7 260 aa5.67□□□□□ -1.5
SHROOM3-206ENST00000484236 HSPB8Q9UJY1 196 aa5.67□□□□□ -1.5
SHROOM3-206ENST00000484236 RNF114Q9Y508 228 aa5.67□□□□□ -1.5
SHROOM3-206ENST00000484236 U3KQK5 164 aa5.67□□□□□ -1.5
SHROOM3-206ENST00000484236 AKAP6Q13023 2319 aa5.66□□□□□ -1.5
SHROOM3-206ENST00000484236 IGHV1-24A0A0C4DH33 117 aa5.66□□□□□ -1.5
SHROOM3-206ENST00000484236 TRBV7-9A0A0J9YWB2 115 aa5.66□□□□□ -1.5
SHROOM3-206ENST00000484236 OVOL1O14753 267 aa5.66□□□□□ -1.5
SHROOM3-206ENST00000484236 LEPROTL1O95214 131 aa5.66□□□□□ -1.5
SHROOM3-206ENST00000484236 PPBPP02775 128 aa5.66□□□□□ -1.5
SHROOM3-206ENST00000484236 HLA-DMBP28068 263 aa5.66□□□□□ -1.5
SHROOM3-206ENST00000484236 CFHR3Q02985 330 aa5.66□□□□□ -1.5
SHROOM3-206ENST00000484236 LY6EQ16553 131 aa5.66□□□□□ -1.5
SHROOM3-206ENST00000484236 PET117Q6UWS5 81 aa5.66□□□□□ -1.5
SHROOM3-206ENST00000484236 Q71RC1 249 aaPredicted RBP5.66□□□□□ -1.5
SHROOM3-206ENST00000484236 ORMDL3Q8N138 153 aa5.66□□□□□ -1.5
SHROOM3-206ENST00000484236 Q8TAT8 98 aa5.66□□□□□ -1.5
SHROOM3-206ENST00000484236 TMEM191AQ9H0A3 160 aa5.66□□□□□ -1.5
SHROOM3-206ENST00000484236 AGPAT4-IT1Q9H0P7 198 aa5.66□□□□□ -1.5
SHROOM3-206ENST00000484236 UQCR10Q9UDW1 63 aa5.66□□□□□ -1.5
SHROOM3-206ENST00000484236 LAMTOR2Q9Y2Q5 125 aa5.66□□□□□ -1.5
SHROOM3-206ENST00000484236 PAM16Q9Y3D7 125 aa5.66□□□□□ -1.5
SHROOM3-206ENST00000484236 CACNA1BQ00975 2339 aa5.65□□□□□ -1.5
SHROOM3-206ENST00000484236 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.65□□□□□ -1.5
SHROOM3-206ENST00000484236 IGHV3OR16-8A0A075B7F1 116 aa5.65□□□□□ -1.5
SHROOM3-206ENST00000484236 TRAV9-2A0A087WT02 112 aa5.65□□□□□ -1.5
SHROOM3-206ENST00000484236 PRAC2D3DTV9 90 aa5.65□□□□□ -1.5
SHROOM3-206ENST00000484236 SYS1-DBNDD2H3BUS1 97 aa5.65□□□□□ -1.5
SHROOM3-206ENST00000484236 K7EMT4 169 aa5.65□□□□□ -1.5
SHROOM3-206ENST00000484236 ORM1P02763 201 aa5.65□□□□□ -1.5
SHROOM3-206ENST00000484236 RNF224P0DH78 156 aa5.65□□□□□ -1.5
SHROOM3-206ENST00000484236 PF4V1P10720 104 aa5.65□□□□□ -1.5
SHROOM3-206ENST00000484236 ZNF80P51504 273 aaPredicted RBP5.65□□□□□ -1.5
SHROOM3-206ENST00000484236 LOXL1Q08397 574 aaPredicted RBP5.65□□□□□ -1.5
SHROOM3-206ENST00000484236 TDRG1Q3Y452 100 aa5.65□□□□□ -1.5
SHROOM3-206ENST00000484236 SPATA45Q537H7 98 aa5.65□□□□□ -1.5
SHROOM3-206ENST00000484236 IGFL4Q6B9Z1 124 aa5.65□□□□□ -1.5
SHROOM3-206ENST00000484236 EBLN2Q6P2I7 272 aa5.65□□□□□ -1.5
SHROOM3-206ENST00000484236 ZNF705AQ6ZN79 300 aaPredicted RBP5.65□□□□□ -1.5
SHROOM3-206ENST00000484236 FA2HQ7L5A8 372 aa5.65□□□□□ -1.5
SHROOM3-206ENST00000484236 LRRC75A-AS1Q8N1F1 130 aa5.65□□□□□ -1.5
SHROOM3-206ENST00000484236 OR4X2Q8NGF9 303 aa5.65□□□□□ -1.5
SHROOM3-206ENST00000484236 PRSS3P2Q8NHM4 247 aa5.65□□□□□ -1.5
SHROOM3-206ENST00000484236 C16orf92Q96LL3 132 aa5.65□□□□□ -1.5
SHROOM3-206ENST00000484236 LINC00477Q96M19 166 aa5.65□□□□□ -1.5
SHROOM3-206ENST00000484236 TPPP3Q9BW30 176 aa5.65□□□□□ -1.5
SHROOM3-206ENST00000484236 MAP1LC3CQ9BXW4 147 aa5.65□□□□□ -1.5
SHROOM3-206ENST00000484236 NPFFR1Q9GZQ6 430 aa5.65□□□□□ -1.5
SHROOM3-206ENST00000484236 AP5S1Q9NUS5 200 aa5.65□□□□□ -1.5
SHROOM3-206ENST00000484236 BEX4Q9NWD9 120 aaPredicted RBP5.65□□□□□ -1.5
SHROOM3-206ENST00000484236 ZMAT5Q9UDW3 170 aaKnown RBP5.65□□□□□ -1.5
SHROOM3-206ENST00000484236 TACC2O95359 2948 aa5.65□□□□□ -1.51
SHROOM3-206ENST00000484236 TMSB15BA0A087X1C1 80 aa5.64□□□□□ -1.51
SHROOM3-206ENST00000484236 A0A096LNT2 108 aa5.64□□□□□ -1.51
SHROOM3-206ENST00000484236 IGHV3-66A0A0C4DH42 116 aa5.64□□□□□ -1.51
SHROOM3-206ENST00000484236 IGHV7-4-1A0A0J9YVY3 117 aa5.64□□□□□ -1.51
SHROOM3-206ENST00000484236 BLCAPP62952 87 aa5.64□□□□□ -1.51
SHROOM3-206ENST00000484236 CACNG7P62955 275 aa5.64□□□□□ -1.51
SHROOM3-206ENST00000484236 FOXE3Q13461 319 aa5.64□□□□□ -1.51
SHROOM3-206ENST00000484236 TWIST1Q15672 202 aa5.64□□□□□ -1.51
SHROOM3-206ENST00000484236 MRPL51Q4U2R6 128 aaKnown RBP5.64□□□□□ -1.51
SHROOM3-206ENST00000484236 IL17RELQ6ZVW7 336 aa5.64□□□□□ -1.51
SHROOM3-206ENST00000484236 SPATA12Q7Z6I5 190 aa5.64□□□□□ -1.51
SHROOM3-206ENST00000484236 LINC00528Q8N1L1 170 aa5.64□□□□□ -1.51
SHROOM3-206ENST00000484236 RNF182Q8N6D2 247 aa5.64□□□□□ -1.51
SHROOM3-206ENST00000484236 OR10AG1Q8NH19 301 aa5.64□□□□□ -1.51
SHROOM3-206ENST00000484236 PRELID3AQ96N28 172 aa5.64□□□□□ -1.51
SHROOM3-206ENST00000484236 LINC00527Q9UJ94 153 aa5.64□□□□□ -1.51
SHROOM3-206ENST00000484236 RELNP78509 3460 aa5.64□□□□□ -1.51
SHROOM3-206ENST00000484236 IGHV4-4A0A075B6R2 117 aa5.63□□□□□ -1.51
SHROOM3-206ENST00000484236 IGHV3OR16-13A0A075B7E8 117 aa5.63□□□□□ -1.51
SHROOM3-206ENST00000484236 IGHV3-74A0A0B4J1X5 117 aa5.63□□□□□ -1.51
SHROOM3-206ENST00000484236 TMEM213A2RRL7 107 aa5.63□□□□□ -1.51
SHROOM3-206ENST00000484236 D6R8Y8 96 aa5.63□□□□□ -1.51
SHROOM3-206ENST00000484236 SOCS3O14543 225 aa5.63□□□□□ -1.51
SHROOM3-206ENST00000484236 ZNF207O43670 478 aaKnown RBP5.63□□□□□ -1.51
SHROOM3-206ENST00000484236 IGLC3P0DOY3 106 aa5.63□□□□□ -1.51
SHROOM3-206ENST00000484236 SSTP61278 116 aa5.63□□□□□ -1.51
SHROOM3-206ENST00000484236 ERCC8Q13216 396 aa5.63□□□□□ -1.51
SHROOM3-206ENST00000484236 FAM106AQ4KMX7 169 aa5.63□□□□□ -1.51
SHROOM3-206ENST00000484236 ZNF575Q86XF7 245 aa5.63□□□□□ -1.51
SHROOM3-206ENST00000484236 GPHB5Q86YW7 130 aa5.63□□□□□ -1.51
SHROOM3-206ENST00000484236 AMN1Q8IY45 258 aa5.63□□□□□ -1.51
SHROOM3-206ENST00000484236 ZNF843Q8N446 348 aa5.63□□□□□ -1.51
SHROOM3-206ENST00000484236 OR10J6PQ8NGY7 276 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms