RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 EIF5AP63241 154 aaKnown RBP7.18□□□□□ -1.26
CPSF4-213ENST00000484112 RPL7L1Q6DKI1 246 aaKnown RBP7.18□□□□□ -1.26
CPSF4-213ENST00000484112 KCNRGQ8N5I3 272 aa7.18□□□□□ -1.26
CPSF4-213ENST00000484112 BLNKQ8WV28 456 aa7.18□□□□□ -1.26
CPSF4-213ENST00000484112 ARPC5LQ9BPX5 153 aa7.18□□□□□ -1.26
CPSF4-213ENST00000484112 ACTR3CQ9C0K3 210 aaPredicted RBP7.18□□□□□ -1.26
CPSF4-213ENST00000484112 TRAV10A0A0B4J240 114 aa7.17□□□□□ -1.26
CPSF4-213ENST00000484112 A0A1B0GVY2 172 aa7.17□□□□□ -1.26
CPSF4-213ENST00000484112 H3BTX0 84 aa7.17□□□□□ -1.26
CPSF4-213ENST00000484112 M0R2N4 97 aa7.17□□□□□ -1.26
CPSF4-213ENST00000484112 CRXO43186 299 aaPredicted RBP7.17□□□□□ -1.26
CPSF4-213ENST00000484112 OR10J4P0C629 311 aa7.17□□□□□ -1.26
CPSF4-213ENST00000484112 RBMY1A1P0DJD3 496 aaKnown RBP7.17□□□□□ -1.26
CPSF4-213ENST00000484112 RBMY1CP0DJD4 496 aa7.17□□□□□ -1.26
CPSF4-213ENST00000484112 RAB2AP61019 212 aa7.17□□□□□ -1.26
CPSF4-213ENST00000484112 ICAM4Q14773 271 aa7.17□□□□□ -1.26
CPSF4-213ENST00000484112 RBMY1FQ15415 496 aaKnown RBP7.17□□□□□ -1.26
CPSF4-213ENST00000484112 SPINK13Q1W4C9 94 aa7.17□□□□□ -1.26
CPSF4-213ENST00000484112 RRN3P1Q2M238 152 aa7.17□□□□□ -1.26
CPSF4-213ENST00000484112 C9orf47Q6ZRZ4 202 aa7.17□□□□□ -1.26
CPSF4-213ENST00000484112 Q6ZTC4 211 aa7.17□□□□□ -1.26
CPSF4-213ENST00000484112 C1orf158Q8N1D5 194 aa7.17□□□□□ -1.26
CPSF4-213ENST00000484112 SUN5Q8TC36 379 aa7.17□□□□□ -1.26
CPSF4-213ENST00000484112 ZNF503Q96F45 646 aa7.17□□□□□ -1.26
CPSF4-213ENST00000484112 TMEM208Q9BTX3 173 aa7.17□□□□□ -1.26
CPSF4-213ENST00000484112 KANTRA0A1W2PQU2 76 aa7.16□□□□□ -1.26
CPSF4-213ENST00000484112 H7BYZ3 331 aa7.16□□□□□ -1.26
CPSF4-213ENST00000484112 M0R2Z0 102 aa7.16□□□□□ -1.26
CPSF4-213ENST00000484112 CXorf1O96002 111 aa7.16□□□□□ -1.26
CPSF4-213ENST00000484112 SNRPCP09234 159 aaKnown RBP7.16□□□□□ -1.26
CPSF4-213ENST00000484112 FXYD7P58549 80 aa7.16□□□□□ -1.26
CPSF4-213ENST00000484112 TAS2R60P59551 318 aa7.16□□□□□ -1.26
CPSF4-213ENST00000484112 RANP62826 216 aaKnown RBP7.16□□□□□ -1.26
CPSF4-213ENST00000484112 TMEM78Q5T7P6 136 aa7.16□□□□□ -1.26
CPSF4-213ENST00000484112 FAM122CQ6P4D5 195 aa7.16□□□□□ -1.26
CPSF4-213ENST00000484112 TEX261Q6UWH6 196 aa7.16□□□□□ -1.26
CPSF4-213ENST00000484112 TMUB2Q71RG4 321 aa7.16□□□□□ -1.26
CPSF4-213ENST00000484112 EXOC3-AS1Q8N2X6 119 aa7.16□□□□□ -1.26
CPSF4-213ENST00000484112 TMED6Q8WW62 240 aa7.16□□□□□ -1.26
CPSF4-213ENST00000484112 RAB24Q969Q5 203 aa7.16□□□□□ -1.26
CPSF4-213ENST00000484112 Q9H3A6 140 aa7.16□□□□□ -1.26
CPSF4-213ENST00000484112 OTORQ9NRC9 128 aa7.16□□□□□ -1.26
CPSF4-213ENST00000484112 CYTL1Q9NRR1 136 aa7.16□□□□□ -1.26
CPSF4-213ENST00000484112 TMEM167BQ9NRX6 74 aa7.16□□□□□ -1.26
CPSF4-213ENST00000484112 LENEPQ9Y5L5 61 aa7.16□□□□□ -1.26
CPSF4-213ENST00000484112 CTXND1A0A1B0GTU2 59 aa7.15□□□□□ -1.26
CPSF4-213ENST00000484112 SERTM2A0A1B0GWG4 89 aa7.15□□□□□ -1.26
CPSF4-213ENST00000484112 UMAD1C9J7I0 102 aa7.15□□□□□ -1.26
CPSF4-213ENST00000484112 PRAC2D3DTV9 90 aa7.15□□□□□ -1.26
CPSF4-213ENST00000484112 M0R3E3 92 aa7.15□□□□□ -1.26
CPSF4-213ENST00000484112 SEC11BP0C7V7 166 aa7.15□□□□□ -1.26
CPSF4-213ENST00000484112 SPART-AS1P0CW21 52 aa7.15□□□□□ -1.26
CPSF4-213ENST00000484112 CRISP2P16562 243 aa7.15□□□□□ -1.26
CPSF4-213ENST00000484112 AKR1C8PQ5T2L2 129 aa7.15□□□□□ -1.26
CPSF4-213ENST00000484112 ZNF493Q6ZR52 646 aa7.15□□□□□ -1.26
CPSF4-213ENST00000484112 ZNF680Q8NEM1 530 aa7.15□□□□□ -1.26
CPSF4-213ENST00000484112 CMTM2Q8TAZ6 248 aa7.15□□□□□ -1.26
CPSF4-213ENST00000484112 PHYHIPLQ96FC7 376 aa7.15□□□□□ -1.26
CPSF4-213ENST00000484112 FAM19A4Q96LR4 140 aa7.15□□□□□ -1.26
CPSF4-213ENST00000484112 SH3BGRL3Q9H299 93 aa7.15□□□□□ -1.26
CPSF4-213ENST00000484112 IGHV3OR16-12A0A075B7B8 117 aa7.14□□□□□ -1.27
CPSF4-213ENST00000484112 LOC102723971A0A1B0GUV8 181 aa7.14□□□□□ -1.27
CPSF4-213ENST00000484112 FBLL1A6NHQ2 334 aaKnown RBP7.14□□□□□ -1.27
CPSF4-213ENST00000484112 KLLNB2CW77 178 aa7.14□□□□□ -1.27
CPSF4-213ENST00000484112 RTL8CO15255 209 aa7.14□□□□□ -1.27
CPSF4-213ENST00000484112 BCL2L11O43521 198 aa7.14□□□□□ -1.27
CPSF4-213ENST00000484112 ATP6V1G1O75348 118 aa7.14□□□□□ -1.27
CPSF4-213ENST00000484112 IFNA7P01567 189 aa7.14□□□□□ -1.27
CPSF4-213ENST00000484112 ARL14EPLP0DKL9 152 aa7.14□□□□□ -1.27
CPSF4-213ENST00000484112 CT45A10P0DMU9 189 aa7.14□□□□□ -1.27
CPSF4-213ENST00000484112 RYR1P21817 5038 aa7.14□□□□□ -1.27
CPSF4-213ENST00000484112 DPPA3Q6W0C5 159 aa7.14□□□□□ -1.27
CPSF4-213ENST00000484112 SLC51BQ86UW2 128 aa7.14□□□□□ -1.27
CPSF4-213ENST00000484112 BAP18Q8IXM2 172 aa7.14□□□□□ -1.27
CPSF4-213ENST00000484112 POM121L12Q8N7R1 296 aa7.14□□□□□ -1.27
CPSF4-213ENST00000484112 C16orf74Q96GX8 76 aa7.14□□□□□ -1.27
CPSF4-213ENST00000484112 LINC01587Q99440 93 aa7.14□□□□□ -1.27
CPSF4-213ENST00000484112 PYGO2Q9BRQ0 406 aa7.14□□□□□ -1.27
CPSF4-213ENST00000484112 LINC00467Q9BRT7 94 aa7.14□□□□□ -1.27
CPSF4-213ENST00000484112 NIPSNAP3BQ9BS92 247 aa7.14□□□□□ -1.27
CPSF4-213ENST00000484112 NKX6-2Q9C056 277 aaPredicted RBP7.14□□□□□ -1.27
CPSF4-213ENST00000484112 AGPAT4-IT1Q9H0P7 198 aa7.14□□□□□ -1.27
CPSF4-213ENST00000484112 ZNF492Q9P255 531 aa7.14□□□□□ -1.27
CPSF4-213ENST00000484112 TRAV12-2A0A075B6T6 113 aa7.13□□□□□ -1.27
CPSF4-213ENST00000484112 DEFB131BA0A096LNP1 70 aa7.13□□□□□ -1.27
CPSF4-213ENST00000484112 A0A1W2PRE2 83 aa7.13□□□□□ -1.27
CPSF4-213ENST00000484112 LYRM9A8MSI8 78 aa7.13□□□□□ -1.27
CPSF4-213ENST00000484112 DIRC3C9JPN6 131 aa7.13□□□□□ -1.27
CPSF4-213ENST00000484112 P0DMU3 169 aa7.13□□□□□ -1.27
CPSF4-213ENST00000484112 FAM231AP0DMU4 169 aa7.13□□□□□ -1.27
CPSF4-213ENST00000484112 FAM231CP0DMU5 169 aa7.13□□□□□ -1.27
CPSF4-213ENST00000484112 GCHFRP30047 84 aa7.13□□□□□ -1.27
CPSF4-213ENST00000484112 ZNF138P52744 262 aa7.13□□□□□ -1.27
CPSF4-213ENST00000484112 GFI1BQ5VTD9 330 aa7.13□□□□□ -1.27
CPSF4-213ENST00000484112 EIF5AL1Q6IS14 154 aaKnown RBP7.13□□□□□ -1.27
CPSF4-213ENST00000484112 STOML3Q8TAV4 291 aa7.13□□□□□ -1.27
CPSF4-213ENST00000484112 TMEM263Q8WUH6 116 aaKnown RBP7.13□□□□□ -1.27
CPSF4-213ENST00000484112 IGLV2-18A0A075B6J9 118 aa7.12□□□□□ -1.27
CPSF4-213ENST00000484112 C7orf71A4D174 169 aa7.12□□□□□ -1.27
CPSF4-213ENST00000484112 PGPA6NDG6 321 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms