RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 CD300EQ496F6 205 aaPredicted RBP7.56□□□□□ -1.2
HDAC6-226ENST00000483656 TMEM183AQ8IXX5 376 aa7.56□□□□□ -1.2
HDAC6-226ENST00000483656 LINC00482Q8N8I6 264 aa7.56□□□□□ -1.2
HDAC6-226ENST00000483656 ZNF738Q8NE65 137 aa7.56□□□□□ -1.2
HDAC6-226ENST00000483656 Q8TAT8 98 aa7.56□□□□□ -1.2
HDAC6-226ENST00000483656 SMIM12Q96EX1 92 aa7.56□□□□□ -1.2
HDAC6-226ENST00000483656 SFRP2Q96HF1 295 aa7.56□□□□□ -1.2
HDAC6-226ENST00000483656 YPEL4Q96NS1 127 aa7.56□□□□□ -1.2
HDAC6-226ENST00000483656 GPR61Q9BZJ8 451 aa7.56□□□□□ -1.2
HDAC6-226ENST00000483656 CTDSP1Q9GZU7 261 aa7.56□□□□□ -1.2
HDAC6-226ENST00000483656 SMCO4Q9NRQ5 59 aa7.56□□□□□ -1.2
HDAC6-226ENST00000483656 ZFP30Q9Y2G7 519 aa7.56□□□□□ -1.2
HDAC6-226ENST00000483656 COL6A5A8TX70 2615 aa7.56□□□□□ -1.2
HDAC6-226ENST00000483656 VWFP04275 2813 aa7.56□□□□□ -1.2
HDAC6-226ENST00000483656 TRAV2A0A0B4J234 112 aa7.55□□□□□ -1.2
HDAC6-226ENST00000483656 IZUMO1RA6ND01 250 aa7.55□□□□□ -1.2
HDAC6-226ENST00000483656 NPIPB6E9PJ23 425 aa7.55□□□□□ -1.2
HDAC6-226ENST00000483656 F6UB75 175 aa7.55□□□□□ -1.2
HDAC6-226ENST00000483656 ZNF688P0C7X2 276 aa7.55□□□□□ -1.2
HDAC6-226ENST00000483656 ID1P41134 155 aa7.55□□□□□ -1.2
HDAC6-226ENST00000483656 CRIP1P50238 77 aa7.55□□□□□ -1.2
HDAC6-226ENST00000483656 SAMD13Q5VXD3 122 aa7.55□□□□□ -1.2
HDAC6-226ENST00000483656 C9orf47Q6ZRZ4 202 aa7.55□□□□□ -1.2
HDAC6-226ENST00000483656 COX8CQ7Z4L0 72 aa7.55□□□□□ -1.2
HDAC6-226ENST00000483656 OR10G8Q8NGN5 311 aa7.55□□□□□ -1.2
HDAC6-226ENST00000483656 DYNLRB2Q8TF09 96 aa7.55□□□□□ -1.2
HDAC6-226ENST00000483656 ZC2HC1AQ96GY0 325 aa7.55□□□□□ -1.2
HDAC6-226ENST00000483656 C8orf49Q96NF6 230 aa7.55□□□□□ -1.2
HDAC6-226ENST00000483656 PRR25Q96S07 402 aa7.55□□□□□ -1.2
HDAC6-226ENST00000483656 RNASE7Q9H1E1 156 aaKnown RBP7.55□□□□□ -1.2
HDAC6-226ENST00000483656 TUBA4BQ9H853 241 aa7.55□□□□□ -1.2
HDAC6-226ENST00000483656 OSTCQ9NRP0 149 aa7.55□□□□□ -1.2
HDAC6-226ENST00000483656 TMEM242Q9NWH2 141 aa7.55□□□□□ -1.2
HDAC6-226ENST00000483656 TRAV25A0A0B4J276 109 aa7.54□□□□□ -1.2
HDAC6-226ENST00000483656 C19orf71A6NCJ1 209 aa7.54□□□□□ -1.2
HDAC6-226ENST00000483656 FBLL1A6NHQ2 334 aaKnown RBP7.54□□□□□ -1.2
HDAC6-226ENST00000483656 COLCA2A8K830 154 aa7.54□□□□□ -1.2
HDAC6-226ENST00000483656 H7BYZ3 331 aa7.54□□□□□ -1.2
HDAC6-226ENST00000483656 PFN1P07737 140 aaKnown RBP7.54□□□□□ -1.2
HDAC6-226ENST00000483656 FAM231DQ6ZW35 169 aa7.54□□□□□ -1.2
HDAC6-226ENST00000483656 NUDT10Q8NFP7 164 aa7.54□□□□□ -1.2
HDAC6-226ENST00000483656 OR8A1Q8NGG7 326 aa7.54□□□□□ -1.2
HDAC6-226ENST00000483656 ANAPC16Q96DE5 110 aa7.54□□□□□ -1.2
HDAC6-226ENST00000483656 NUDT11Q96G61 164 aa7.54□□□□□ -1.2
HDAC6-226ENST00000483656 PPP1R14DQ9NXH3 145 aa7.54□□□□□ -1.2
HDAC6-226ENST00000483656 ZNF492Q9P255 531 aa7.54□□□□□ -1.2
HDAC6-226ENST00000483656 V9GYV3 84 aa7.54□□□□□ -1.2
HDAC6-226ENST00000483656 CMYA5Q8N3K9 4069 aa7.53□□□□□ -1.2
HDAC6-226ENST00000483656 CXorf65A6NEN9 183 aa7.53□□□□□ -1.2
HDAC6-226ENST00000483656 PPP1R2P9O14990 202 aa7.53□□□□□ -1.2
HDAC6-226ENST00000483656 IGLV1-51P01701 117 aa7.53□□□□□ -1.2
HDAC6-226ENST00000483656 CT45A10P0DMU9 189 aa7.53□□□□□ -1.2
HDAC6-226ENST00000483656 ZNF80P51504 273 aaPredicted RBP7.53□□□□□ -1.2
HDAC6-226ENST00000483656 ZNF138P52744 262 aa7.53□□□□□ -1.2
HDAC6-226ENST00000483656 ERVFC1-1P60608 527 aa7.53□□□□□ -1.2
HDAC6-226ENST00000483656 PAFAH1B2P68402 229 aa7.53□□□□□ -1.2
HDAC6-226ENST00000483656 PSMG4Q5JS54 123 aa7.53□□□□□ -1.2
HDAC6-226ENST00000483656 SAPCD1Q5SSQ6 148 aa7.53□□□□□ -1.2
HDAC6-226ENST00000483656 GDF5OSQ5U4N7 250 aa7.53□□□□□ -1.2
HDAC6-226ENST00000483656 PRR27Q6MZM9 219 aa7.53□□□□□ -1.2
HDAC6-226ENST00000483656 RBPMS2Q6ZRY4 209 aaKnown RBP7.53□□□□□ -1.2
HDAC6-226ENST00000483656 FAM19A4Q96LR4 140 aa7.53□□□□□ -1.2
HDAC6-226ENST00000483656 ZNF747Q9BV97 191 aa7.53□□□□□ -1.2
HDAC6-226ENST00000483656 ZNF256Q9Y2P7 627 aaPredicted RBP7.53□□□□□ -1.2
HDAC6-226ENST00000483656 SAP30O75446 220 aa7.52□□□□□ -1.21
HDAC6-226ENST00000483656 PF4P02776 101 aa7.52□□□□□ -1.21
HDAC6-226ENST00000483656 HIST1H1AQ02539 215 aaPredicted RBP7.52□□□□□ -1.21
HDAC6-226ENST00000483656 ELOBQ15370 118 aa7.52□□□□□ -1.21
HDAC6-226ENST00000483656 IBA57Q5T440 356 aaKnown RBP7.52□□□□□ -1.21
HDAC6-226ENST00000483656 TMEM78Q5T7P6 136 aa7.52□□□□□ -1.21
HDAC6-226ENST00000483656 OR10J6PQ8NGY7 276 aa7.52□□□□□ -1.21
HDAC6-226ENST00000483656 LINC00477Q96M19 166 aa7.52□□□□□ -1.21
HDAC6-226ENST00000483656 SPAG8Q99932 426 aaPredicted RBP7.52□□□□□ -1.21
HDAC6-226ENST00000483656 A0A0J9YX75 114 aa7.51□□□□□ -1.21
HDAC6-226ENST00000483656 GATCO43716 136 aaKnown RBP7.51□□□□□ -1.21
HDAC6-226ENST00000483656 CXCL1P09341 107 aa7.51□□□□□ -1.21
HDAC6-226ENST00000483656 CD33P20138 364 aa7.51□□□□□ -1.21
HDAC6-226ENST00000483656 DEFB131AP59861 70 aa7.51□□□□□ -1.21
HDAC6-226ENST00000483656 SNRPD3P62318 126 aaKnown RBP7.51□□□□□ -1.21
HDAC6-226ENST00000483656 PRR9Q5T870 116 aa7.51□□□□□ -1.21
HDAC6-226ENST00000483656 ZFAND2AQ8N6M9 145 aa7.51□□□□□ -1.21
HDAC6-226ENST00000483656 C15orf54Q8N8G6 183 aa7.51□□□□□ -1.21
HDAC6-226ENST00000483656 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.51□□□□□ -1.21
HDAC6-226ENST00000483656 MAP6D1Q9H9H5 199 aa7.51□□□□□ -1.21
HDAC6-226ENST00000483656 IL36BQ9NZH7 164 aa7.51□□□□□ -1.21
HDAC6-226ENST00000483656 URGCP-MRPS24S4R325 110 aa7.51□□□□□ -1.21
HDAC6-226ENST00000483656 SORL1Q92673 2214 aa7.5□□□□□ -1.21
HDAC6-226ENST00000483656 TGIF2-C20orf24A0A0A6YYL0 155 aa7.5□□□□□ -1.21
HDAC6-226ENST00000483656 OR4C46A6NHA9 309 aa7.5□□□□□ -1.21
HDAC6-226ENST00000483656 ZNF705GA8MUZ8 300 aaPredicted RBP7.5□□□□□ -1.21
HDAC6-226ENST00000483656 SH2D1AO60880 128 aa7.5□□□□□ -1.21
HDAC6-226ENST00000483656 CA1P00915 261 aaPredicted RBP7.5□□□□□ -1.21
HDAC6-226ENST00000483656 FAM3BP58499 235 aaPredicted RBP7.5□□□□□ -1.21
HDAC6-226ENST00000483656 ZNF124Q15973 351 aa7.5□□□□□ -1.21
HDAC6-226ENST00000483656 ODF3L2Q3SX64 289 aa7.5□□□□□ -1.21
HDAC6-226ENST00000483656 SMUG1Q53HV7 270 aa7.5□□□□□ -1.21
HDAC6-226ENST00000483656 ZNF575Q86XF7 245 aa7.5□□□□□ -1.21
HDAC6-226ENST00000483656 OR2K2Q8NGT1 345 aa7.5□□□□□ -1.21
HDAC6-226ENST00000483656 IMMP2LQ96T52 175 aa7.5□□□□□ -1.21
HDAC6-226ENST00000483656 PYGO2Q9BRQ0 406 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms