RNA–Protein interactions for RNA: ENST00000483159.1

MRPL55-229, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-229ENST00000483159 SMLR1H3BR10 107 aa8.84□□□□□ -0.99
MRPL55-229ENST00000483159 ARPC5O15511 151 aa8.84□□□□□ -0.99
MRPL55-229ENST00000483159 SLC25A5P05141 298 aaKnown RBP8.84□□□□□ -0.99
MRPL55-229ENST00000483159 TMEM78Q5T7P6 136 aa8.84□□□□□ -0.99
MRPL55-229ENST00000483159 FAM222AQ5U5X8 452 aa8.84□□□□□ -0.99
MRPL55-229ENST00000483159 ZNF493Q6ZR52 646 aa8.84□□□□□ -0.99
MRPL55-229ENST00000483159 ARL6IP6Q8N6S5 226 aa8.84□□□□□ -0.99
MRPL55-229ENST00000483159 RXFP4Q8TDU9 374 aa8.84□□□□□ -0.99
MRPL55-229ENST00000483159 FAM19A4Q96LR4 140 aa8.84□□□□□ -0.99
MRPL55-229ENST00000483159 Q9H3A6 140 aa8.84□□□□□ -0.99
MRPL55-229ENST00000483159 YTHDF2Q9Y5A9 579 aaKnown RBP8.84□□□□□ -0.99
MRPL55-229ENST00000483159 LYRM9A8MSI8 78 aa8.83□□□□□ -1
MRPL55-229ENST00000483159 HMSDA8MTL9 139 aa8.83□□□□□ -1
MRPL55-229ENST00000483159 STAG3L2P0CL84 134 aa8.83□□□□□ -1
MRPL55-229ENST00000483159 STAG3L3P0CL85 134 aa8.83□□□□□ -1
MRPL55-229ENST00000483159 CRISP2P16562 243 aa8.83□□□□□ -1
MRPL55-229ENST00000483159 CDC34P49427 236 aaPredicted RBP8.83□□□□□ -1
MRPL55-229ENST00000483159 ERCC8Q13216 396 aa8.83□□□□□ -1
MRPL55-229ENST00000483159 FAM74A1Q5RGS3 127 aa8.83□□□□□ -1
MRPL55-229ENST00000483159 GFI1BQ5VTD9 330 aa8.83□□□□□ -1
MRPL55-229ENST00000483159 RAB24Q969Q5 203 aa8.83□□□□□ -1
MRPL55-229ENST00000483159 C16orf74Q96GX8 76 aa8.83□□□□□ -1
MRPL55-229ENST00000483159 NIPSNAP3BQ9BS92 247 aa8.83□□□□□ -1
MRPL55-229ENST00000483159 ACTR3CQ9C0K3 210 aaPredicted RBP8.83□□□□□ -1
MRPL55-229ENST00000483159 SH3BGRL3Q9H299 93 aa8.83□□□□□ -1
MRPL55-229ENST00000483159 OTORQ9NRC9 128 aa8.83□□□□□ -1
MRPL55-229ENST00000483159 DEFB131BA0A096LNP1 70 aa8.82□□□□□ -1
MRPL55-229ENST00000483159 KLLNB2CW77 178 aa8.82□□□□□ -1
MRPL55-229ENST00000483159 AZU1P20160 251 aa8.82□□□□□ -1
MRPL55-229ENST00000483159 ZNF138P52744 262 aa8.82□□□□□ -1
MRPL55-229ENST00000483159 ZNF345Q14585 488 aa8.82□□□□□ -1
MRPL55-229ENST00000483159 KIR3DS1Q14943 382 aa8.82□□□□□ -1
MRPL55-229ENST00000483159 CCDC28AQ8IWP9 274 aa8.82□□□□□ -1
MRPL55-229ENST00000483159 OR11H4Q8NGC9 324 aa8.82□□□□□ -1
MRPL55-229ENST00000483159 SUN5Q8TC36 379 aa8.82□□□□□ -1
MRPL55-229ENST00000483159 LINC00476Q8WZB0 136 aa8.82□□□□□ -1
MRPL55-229ENST00000483159 VGLL1Q99990 258 aa8.82□□□□□ -1
MRPL55-229ENST00000483159 ZNF492Q9P255 531 aa8.82□□□□□ -1
MRPL55-229ENST00000483159 IGKV2-40A0A087WW87 121 aaPredicted RBP8.81□□□□□ -1
MRPL55-229ENST00000483159 TRAV12-3A0A0B4J271 114 aa8.81□□□□□ -1
MRPL55-229ENST00000483159 PGPA6NDG6 321 aa8.81□□□□□ -1
MRPL55-229ENST00000483159 IGLL5B9A064 214 aa8.81□□□□□ -1
MRPL55-229ENST00000483159 DIRC3C9JPN6 131 aa8.81□□□□□ -1
MRPL55-229ENST00000483159 CXorf1O96002 111 aa8.81□□□□□ -1
MRPL55-229ENST00000483159 IGKV2D-40P01614 121 aaPredicted RBP8.81□□□□□ -1
MRPL55-229ENST00000483159 PRM2P04554 102 aa8.81□□□□□ -1
MRPL55-229ENST00000483159 ARL14EPLP0DKL9 152 aa8.81□□□□□ -1
MRPL55-229ENST00000483159 HTN1P15515 57 aa8.81□□□□□ -1
MRPL55-229ENST00000483159 ZNF767PQ75MW2 155 aa8.81□□□□□ -1
MRPL55-229ENST00000483159 KCNRGQ8N5I3 272 aa8.81□□□□□ -1
MRPL55-229ENST00000483159 CMTM2Q8TAZ6 248 aa8.81□□□□□ -1
MRPL55-229ENST00000483159 TMEM263Q8WUH6 116 aaKnown RBP8.81□□□□□ -1
MRPL55-229ENST00000483159 PYGO2Q9BRQ0 406 aa8.81□□□□□ -1
MRPL55-229ENST00000483159 LINC00467Q9BRT7 94 aa8.81□□□□□ -1
MRPL55-229ENST00000483159 CYTL1Q9NRR1 136 aa8.81□□□□□ -1
MRPL55-229ENST00000483159 RYR3Q15413 4870 aa8.81□□□□□ -1
MRPL55-229ENST00000483159 A0A0D9SG52 128 aa8.8□□□□□ -1
MRPL55-229ENST00000483159 PLAC8L1A1L4L8 177 aa8.8□□□□□ -1
MRPL55-229ENST00000483159 C7orf71A4D174 169 aa8.8□□□□□ -1
MRPL55-229ENST00000483159 HMGB3O15347 200 aaKnown RBP8.8□□□□□ -1
MRPL55-229ENST00000483159 ZNF324O75467 553 aaPredicted RBP8.8□□□□□ -1
MRPL55-229ENST00000483159 EIF3GO75821 320 aaKnown RBP eCLIP8.8□□□□□ -1
MRPL55-229ENST00000483159 GPX1P07203 203 aa8.8□□□□□ -1
MRPL55-229ENST00000483159 GCHFRP30047 84 aa8.8□□□□□ -1
MRPL55-229ENST00000483159 DAD1P61803 113 aa8.8□□□□□ -1
MRPL55-229ENST00000483159 LGALS9CQ6DKI2 356 aa8.8□□□□□ -1
MRPL55-229ENST00000483159 RNASE8Q8TDE3 154 aaKnown RBP8.8□□□□□ -1
MRPL55-229ENST00000483159 TMED6Q8WW62 240 aa8.8□□□□□ -1
MRPL55-229ENST00000483159 FAM210BQ96KR6 192 aa8.8□□□□□ -1
MRPL55-229ENST00000483159 ARPC5LQ9BPX5 153 aa8.8□□□□□ -1
MRPL55-229ENST00000483159 TMEM167BQ9NRX6 74 aa8.8□□□□□ -1
MRPL55-229ENST00000483159 APLNQ9ULZ1 77 aa8.8□□□□□ -1
MRPL55-229ENST00000483159 TIMM8BQ9Y5J9 83 aaPredicted RBP8.8□□□□□ -1
MRPL55-229ENST00000483159 LENEPQ9Y5L5 61 aa8.8□□□□□ -1
MRPL55-229ENST00000483159 IGHV4-4A0A075B6R2 117 aa8.79□□□□□ -1
MRPL55-229ENST00000483159 J3KRW8 73 aa8.79□□□□□ -1
MRPL55-229ENST00000483159 LY6G6CO95867 125 aa8.79□□□□□ -1
MRPL55-229ENST00000483159 RNASE4P34096 147 aaKnown RBP8.79□□□□□ -1
MRPL55-229ENST00000483159 LGALSLQ3ZCW2 172 aaPredicted RBP8.79□□□□□ -1
MRPL55-229ENST00000483159 AKR1C8PQ5T2L2 129 aa8.79□□□□□ -1
MRPL55-229ENST00000483159 C9orf62Q8N4C0 152 aa8.79□□□□□ -1
MRPL55-229ENST00000483159 ZFAND2AQ8N6M9 145 aa8.79□□□□□ -1
MRPL55-229ENST00000483159 CTXND1A0A1B0GTU2 59 aa8.78□□□□□ -1
MRPL55-229ENST00000483159 SERTM2A0A1B0GWG4 89 aa8.78□□□□□ -1
MRPL55-229ENST00000483159 NDUFAF3Q9BU61 184 aa8.78□□□□□ -1
MRPL55-229ENST00000483159 DYNC2H1Q8NCM8 4307 aaKnown RBP8.78□□□□□ -1
MRPL55-229ENST00000483159 CBY3A6NI87 242 aa8.77□□□□□ -1.01
MRPL55-229ENST00000483159 BTN1A1Q13410 526 aa8.77□□□□□ -1.01
MRPL55-229ENST00000483159 ANXA2RQ3ZCQ2 193 aa8.77□□□□□ -1.01
MRPL55-229ENST00000483159 C5orf17Q8NAS9 161 aa8.77□□□□□ -1.01
MRPL55-229ENST00000483159 ZNF680Q8NEM1 530 aa8.77□□□□□ -1.01
MRPL55-229ENST00000483159 KANTRA0A1W2PQU2 76 aa8.76□□□□□ -1.01
MRPL55-229ENST00000483159 A0A1W2PRE2 83 aa8.76□□□□□ -1.01
MRPL55-229ENST00000483159 SNURFLB1AK76 121 aa8.76□□□□□ -1.01
MRPL55-229ENST00000483159 K7EQM0 130 aa8.76□□□□□ -1.01
MRPL55-229ENST00000483159 BCL2L11O43521 198 aa8.76□□□□□ -1.01
MRPL55-229ENST00000483159 SEC11BP0C7V7 166 aa8.76□□□□□ -1.01
MRPL55-229ENST00000483159 DEFB130BP0DP73 79 aa8.76□□□□□ -1.01
MRPL55-229ENST00000483159 DEFB130AP0DP74 79 aa8.76□□□□□ -1.01
MRPL55-229ENST00000483159 EIF5AP63241 154 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms