RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 EPDR1Q9UM22 224 aa9.69□□□□□ -0.86
HDAC1-208ENST00000482310 KMT2CQ8NEZ4 4911 aaKnown RBP9.68□□□□□ -0.86
HDAC1-208ENST00000482310 IGHV3OR16-12A0A075B7B8 117 aa9.68□□□□□ -0.86
HDAC1-208ENST00000482310 BCL2P10415 239 aa9.68□□□□□ -0.86
HDAC1-208ENST00000482310 NUTF2P61970 127 aaKnown RBP9.68□□□□□ -0.86
HDAC1-208ENST00000482310 KIR3DS1Q14943 382 aa9.68□□□□□ -0.86
HDAC1-208ENST00000482310 TOR2AQ5JU69 321 aa9.68□□□□□ -0.86
HDAC1-208ENST00000482310 MORN3Q6PF18 240 aaPredicted RBP9.68□□□□□ -0.86
HDAC1-208ENST00000482310 PRNTQ86SH4 94 aa9.68□□□□□ -0.86
HDAC1-208ENST00000482310 CYB561D1Q8N8Q1 229 aa9.68□□□□□ -0.86
HDAC1-208ENST00000482310 LINC00479Q96M42 142 aa9.68□□□□□ -0.86
HDAC1-208ENST00000482310 B9D2Q9BPU9 175 aa9.68□□□□□ -0.86
HDAC1-208ENST00000482310 ATG101Q9BSB4 218 aa9.68□□□□□ -0.86
HDAC1-208ENST00000482310 LOC102723971A0A1B0GUV8 181 aa9.67□□□□□ -0.86
HDAC1-208ENST00000482310 K7EQM0 130 aa9.67□□□□□ -0.86
HDAC1-208ENST00000482310 NMBP08949 121 aa9.67□□□□□ -0.86
HDAC1-208ENST00000482310 GIG44P09565 113 aaPredicted RBP9.67□□□□□ -0.86
HDAC1-208ENST00000482310 AKR1C3P42330 323 aa9.67□□□□□ -0.86
HDAC1-208ENST00000482310 C9orf47Q6ZRZ4 202 aa9.67□□□□□ -0.86
HDAC1-208ENST00000482310 NKX6-2Q9C056 277 aaPredicted RBP9.67□□□□□ -0.86
HDAC1-208ENST00000482310 ARL2-SNX15V9GYD0 113 aa9.67□□□□□ -0.86
HDAC1-208ENST00000482310 DNAH9Q9NYC9 4486 aa9.67□□□□□ -0.86
HDAC1-208ENST00000482310 KIR2DL5BA0A0G2JN68 375 aa9.66□□□□□ -0.86
HDAC1-208ENST00000482310 KIR2DL5BA0A0G2JPC4 375 aa9.66□□□□□ -0.86
HDAC1-208ENST00000482310 RBAKDNA6NC62 111 aa9.66□□□□□ -0.86
HDAC1-208ENST00000482310 A8MTW9 85 aa9.66□□□□□ -0.86
HDAC1-208ENST00000482310 F6UZH7 168 aa9.66□□□□□ -0.86
HDAC1-208ENST00000482310 LEPP41159 167 aa9.66□□□□□ -0.86
HDAC1-208ENST00000482310 ZNF138P52744 262 aa9.66□□□□□ -0.86
HDAC1-208ENST00000482310 CEBPGP53567 150 aa9.66□□□□□ -0.86
HDAC1-208ENST00000482310 RAB14P61106 215 aa9.66□□□□□ -0.86
HDAC1-208ENST00000482310 MEF2BQ02080 365 aaPredicted RBP9.66□□□□□ -0.86
HDAC1-208ENST00000482310 ZNF767PQ75MW2 155 aa9.66□□□□□ -0.86
HDAC1-208ENST00000482310 CCDC28AQ8IWP9 274 aa9.66□□□□□ -0.86
HDAC1-208ENST00000482310 KIR2DL5AQ8N109 375 aa9.66□□□□□ -0.86
HDAC1-208ENST00000482310 KIR2DL5BQ8NHK3 375 aa9.66□□□□□ -0.86
HDAC1-208ENST00000482310 LINC00477Q96M19 166 aa9.66□□□□□ -0.86
HDAC1-208ENST00000482310 RCHY1Q96PM5 261 aa9.66□□□□□ -0.86
HDAC1-208ENST00000482310 EIF5A2Q9GZV4 153 aaKnown RBP9.66□□□□□ -0.86
HDAC1-208ENST00000482310 ZNF492Q9P255 531 aa9.66□□□□□ -0.86
HDAC1-208ENST00000482310 TENM3Q9P273 2699 aa9.66□□□□□ -0.86
HDAC1-208ENST00000482310 RBFOX3A6NFN3 312 aa9.65□□□□□ -0.86
HDAC1-208ENST00000482310 INSP01308 110 aa9.65□□□□□ -0.86
HDAC1-208ENST00000482310 RNASE4P34096 147 aaKnown RBP9.65□□□□□ -0.86
HDAC1-208ENST00000482310 CDKN1BP46527 198 aa9.65□□□□□ -0.86
HDAC1-208ENST00000482310 UBE2G1P62253 170 aa9.65□□□□□ -0.86
HDAC1-208ENST00000482310 FLI1Q01543 452 aaPredicted RBP9.65□□□□□ -0.86
HDAC1-208ENST00000482310 BTN1A1Q13410 526 aa9.65□□□□□ -0.86
HDAC1-208ENST00000482310 PRR9Q5T870 116 aa9.65□□□□□ -0.86
HDAC1-208ENST00000482310 LYPD6BQ8NI32 183 aa9.65□□□□□ -0.86
HDAC1-208ENST00000482310 HIST1H2BAQ96A08 127 aa9.65□□□□□ -0.86
HDAC1-208ENST00000482310 C8orf49Q96NF6 230 aa9.65□□□□□ -0.86
HDAC1-208ENST00000482310 SPATA25Q9BR10 227 aa9.65□□□□□ -0.86
HDAC1-208ENST00000482310 TMEM208Q9BTX3 173 aa9.65□□□□□ -0.86
HDAC1-208ENST00000482310 C1QTNF4Q9BXJ3 329 aa9.65□□□□□ -0.86
HDAC1-208ENST00000482310 ZMAT4Q9H898 229 aa9.65□□□□□ -0.86
HDAC1-208ENST00000482310 VAX2Q9UIW0 290 aa9.65□□□□□ -0.86
HDAC1-208ENST00000482310 PSG8Q9UQ74 426 aa9.65□□□□□ -0.86
HDAC1-208ENST00000482310 RYR3Q15413 4870 aa9.64□□□□□ -0.87
HDAC1-208ENST00000482310 TRAV12-3A0A0B4J271 114 aa9.64□□□□□ -0.87
HDAC1-208ENST00000482310 UBE2CO00762 179 aa9.64□□□□□ -0.87
HDAC1-208ENST00000482310 SPRY2O43597 315 aa9.64□□□□□ -0.87
HDAC1-208ENST00000482310 GPX1P07203 203 aa9.64□□□□□ -0.87
HDAC1-208ENST00000482310 TSPOP30536 169 aa9.64□□□□□ -0.87
HDAC1-208ENST00000482310 GFI1BQ5VTD9 330 aa9.64□□□□□ -0.87
HDAC1-208ENST00000482310 Q86TA4 180 aa9.64□□□□□ -0.87
HDAC1-208ENST00000482310 TMEM75Q8N9X5 138 aa9.64□□□□□ -0.87
HDAC1-208ENST00000482310 NHLRC2Q8NBF2 726 aa9.64□□□□□ -0.87
HDAC1-208ENST00000482310 CLUHP3Q96NS8 147 aa9.64□□□□□ -0.87
HDAC1-208ENST00000482310 DERL1Q9BUN8 251 aa9.64□□□□□ -0.87
HDAC1-208ENST00000482310 HUWE1Q7Z6Z7 4374 aaKnown RBP9.63□□□□□ -0.87
HDAC1-208ENST00000482310 SERTM2A0A1B0GWG4 89 aa9.63□□□□□ -0.87
HDAC1-208ENST00000482310 CRXO43186 299 aaPredicted RBP9.63□□□□□ -0.87
HDAC1-208ENST00000482310 IGLV2-11P01706 119 aa9.63□□□□□ -0.87
HDAC1-208ENST00000482310 PRM2P04554 102 aa9.63□□□□□ -0.87
HDAC1-208ENST00000482310 RBMY1A1P0DJD3 496 aaKnown RBP9.63□□□□□ -0.87
HDAC1-208ENST00000482310 RBMY1CP0DJD4 496 aa9.63□□□□□ -0.87
HDAC1-208ENST00000482310 HTN1P15515 57 aa9.63□□□□□ -0.87
HDAC1-208ENST00000482310 RBMY1FQ15415 496 aaKnown RBP9.63□□□□□ -0.87
HDAC1-208ENST00000482310 Q6ZQT7 251 aa9.63□□□□□ -0.87
HDAC1-208ENST00000482310 ARL6IP6Q8N6S5 226 aa9.63□□□□□ -0.87
HDAC1-208ENST00000482310 OR11H2Q8NH07 326 aa9.63□□□□□ -0.87
HDAC1-208ENST00000482310 TVP23CQ96ET8 276 aa9.63□□□□□ -0.87
HDAC1-208ENST00000482310 IGF2BP2-AS1Q96M15 143 aa9.63□□□□□ -0.87
HDAC1-208ENST00000482310 ODF3Q96PU9 254 aa9.63□□□□□ -0.87
HDAC1-208ENST00000482310 TM2D3Q9BRN9 247 aa9.63□□□□□ -0.87
HDAC1-208ENST00000482310 OVOL2Q9BRP0 275 aa9.63□□□□□ -0.87
HDAC1-208ENST00000482310 NDFIP1Q9BT67 221 aa9.63□□□□□ -0.87
HDAC1-208ENST00000482310 TREM1Q9NP99 234 aa9.63□□□□□ -0.87
HDAC1-208ENST00000482310 MED9Q9NWA0 146 aa9.63□□□□□ -0.87
HDAC1-208ENST00000482310 C7orf71A4D174 169 aa9.62□□□□□ -0.87
HDAC1-208ENST00000482310 AMBPP02760 352 aa9.62□□□□□ -0.87
HDAC1-208ENST00000482310 ZNF674Q2M3X9 581 aa9.62□□□□□ -0.87
HDAC1-208ENST00000482310 ZNF506Q5JVG8 444 aa9.62□□□□□ -0.87
HDAC1-208ENST00000482310 Q6ZWC4 215 aa9.62□□□□□ -0.87
HDAC1-208ENST00000482310 ZFAND2AQ8N6M9 145 aa9.62□□□□□ -0.87
HDAC1-208ENST00000482310 CSNK1G2-AS1Q8NCQ2 148 aa9.62□□□□□ -0.87
HDAC1-208ENST00000482310 C2CD4CQ8TF44 421 aa9.62□□□□□ -0.87
HDAC1-208ENST00000482310 RNF183Q96D59 192 aa9.62□□□□□ -0.87
HDAC1-208ENST00000482310 FMC1Q96HJ9 113 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms