RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 RNF141Q8WVD5 230 aa14.05□□□□□ -0.16
MSH5-215ENST00000482280 UBE2L3P68036 154 aaKnown RBP14.04□□□□□ -0.16
MSH5-215ENST00000482280 KHDC3LQ587J8 217 aa14.04□□□□□ -0.16
MSH5-215ENST00000482280 SOHLH1Q5JUK2 328 aa14.04□□□□□ -0.16
MSH5-215ENST00000482280 ZNF680Q8NEM1 530 aa14.04□□□□□ -0.16
MSH5-215ENST00000482280 EPPK1P58107 5090 aaKnown RBP14.04□□□□□ -0.16
MSH5-215ENST00000482280 IGLV2-18A0A075B6J9 118 aa14.03□□□□□ -0.16
MSH5-215ENST00000482280 RNASE4P34096 147 aaKnown RBP14.03□□□□□ -0.16
MSH5-215ENST00000482280 FAM3BP58499 235 aaPredicted RBP14.03□□□□□ -0.16
MSH5-215ENST00000482280 OR5I1Q13606 314 aa14.03□□□□□ -0.16
MSH5-215ENST00000482280 FAM167A-AS1Q96KT0 104 aa14.03□□□□□ -0.16
MSH5-215ENST00000482280 AGPAT4-IT1Q9H0P7 198 aa14.03□□□□□ -0.16
MSH5-215ENST00000482280 IGKV2-40A0A087WW87 121 aaPredicted RBP14.02□□□□□ -0.17
MSH5-215ENST00000482280 GAGE12BA1L429 117 aa14.02□□□□□ -0.17
MSH5-215ENST00000482280 GAGE7O76087 117 aa14.02□□□□□ -0.17
MSH5-215ENST00000482280 PTTG1O95997 202 aa14.02□□□□□ -0.17
MSH5-215ENST00000482280 IGKV2D-40P01614 121 aaPredicted RBP14.02□□□□□ -0.17
MSH5-215ENST00000482280 GAGE12FP0CL80 117 aa14.02□□□□□ -0.17
MSH5-215ENST00000482280 GAGE12GP0CL81 117 aa14.02□□□□□ -0.17
MSH5-215ENST00000482280 GAGE12IP0CL82 117 aa14.02□□□□□ -0.17
MSH5-215ENST00000482280 CCL18P55774 89 aa14.02□□□□□ -0.17
MSH5-215ENST00000482280 LGALS9BQ3B8N2 356 aa14.02□□□□□ -0.17
MSH5-215ENST00000482280 C9orf47Q6ZRZ4 202 aa14.02□□□□□ -0.17
MSH5-215ENST00000482280 FXYD5Q96DB9 178 aa14.02□□□□□ -0.17
MSH5-215ENST00000482280 A0A1W2PPV4 95 aa14.01□□□□□ -0.17
MSH5-215ENST00000482280 RGS13O14921 159 aa14.01□□□□□ -0.17
MSH5-215ENST00000482280 NMBP08949 121 aa14.01□□□□□ -0.17
MSH5-215ENST00000482280 RANP62826 216 aaKnown RBP14.01□□□□□ -0.17
MSH5-215ENST00000482280 ACOT6Q3I5F7 207 aaPredicted RBP14.01□□□□□ -0.17
MSH5-215ENST00000482280 FAM74A1Q5RGS3 127 aa14.01□□□□□ -0.17
MSH5-215ENST00000482280 LYPD1Q8N2G4 141 aa14.01□□□□□ -0.17
MSH5-215ENST00000482280 MED28Q9H204 178 aa14.01□□□□□ -0.17
MSH5-215ENST00000482280 ALG5Q9Y673 324 aa14.01□□□□□ -0.17
MSH5-215ENST00000482280 KLLNB2CW77 178 aa14□□□□□ -0.17
MSH5-215ENST00000482280 BTN1A1Q13410 526 aa14□□□□□ -0.17
MSH5-215ENST00000482280 EIF4E3Q8N5X7 224 aaKnown RBP14□□□□□ -0.17
MSH5-215ENST00000482280 GNPNAT1Q96EK6 184 aaPredicted RBP14□□□□□ -0.17
MSH5-215ENST00000482280 PHYHIPLQ96FC7 376 aa14□□□□□ -0.17
MSH5-215ENST00000482280 TRGV2A0A075B6R0 118 aa13.99□□□□□ -0.17
MSH5-215ENST00000482280 ZNF138P52744 262 aa13.99□□□□□ -0.17
MSH5-215ENST00000482280 CMTM2Q8TAZ6 248 aa13.99□□□□□ -0.17
MSH5-215ENST00000482280 RXFP4Q8TDU9 374 aa13.99□□□□□ -0.17
MSH5-215ENST00000482280 ARPC5LQ9BPX5 153 aa13.99□□□□□ -0.17
MSH5-215ENST00000482280 Q9H3A6 140 aa13.99□□□□□ -0.17
MSH5-215ENST00000482280 CRISP2P16562 243 aa13.98□□□□□ -0.17
MSH5-215ENST00000482280 M6PRP20645 277 aa13.98□□□□□ -0.17
MSH5-215ENST00000482280 CD300CQ08708 224 aa13.98□□□□□ -0.17
MSH5-215ENST00000482280 DAZ2Q13117 558 aaKnown RBP13.98□□□□□ -0.17
MSH5-215ENST00000482280 ZNF266Q14584 549 aa13.98□□□□□ -0.17
MSH5-215ENST00000482280 VGLL1Q99990 258 aa13.98□□□□□ -0.17
MSH5-215ENST00000482280 ZNF492Q9P255 531 aa13.98□□□□□ -0.17
MSH5-215ENST00000482280 FAM19A4Q96LR4 140 aa13.97□□□□□ -0.17
MSH5-215ENST00000482280 LINC00467Q9BRT7 94 aa13.97□□□□□ -0.17
MSH5-215ENST00000482280 GSN-AS1Q9NRJ2 163 aa13.97□□□□□ -0.17
MSH5-215ENST00000482280 TRAV26-1A0A087WT03 109 aa13.96□□□□□ -0.17
MSH5-215ENST00000482280 TRBV7-9A0A0J9YWB2 115 aa13.96□□□□□ -0.17
MSH5-215ENST00000482280 RBAKDNA6NC62 111 aa13.96□□□□□ -0.17
MSH5-215ENST00000482280 PRSS29PA6NIE9 313 aa13.96□□□□□ -0.17
MSH5-215ENST00000482280 ANXA2RQ3ZCQ2 193 aa13.96□□□□□ -0.17
MSH5-215ENST00000482280 LINC00612Q8N6U2 182 aa13.96□□□□□ -0.17
MSH5-215ENST00000482280 HYLS1Q96M11 299 aa13.96□□□□□ -0.17
MSH5-215ENST00000482280 TRGV1A0A0A0MS02 117 aa13.95□□□□□ -0.18
MSH5-215ENST00000482280 ZNF324O75467 553 aaPredicted RBP13.95□□□□□ -0.18
MSH5-215ENST00000482280 PQLC2Q6ZP29 291 aa13.95□□□□□ -0.18
MSH5-215ENST00000482280 Q8TAT8 98 aa13.95□□□□□ -0.18
MSH5-215ENST00000482280 BIRC6Q9NR09 4857 aa13.95□□□□□ -0.18
MSH5-215ENST00000482280 IGHV1OR15-1A0A075B7D0 117 aa13.94□□□□□ -0.18
MSH5-215ENST00000482280 A0A0J9YY99 117 aa13.94□□□□□ -0.18
MSH5-215ENST00000482280 IBA57Q5T440 356 aaKnown RBP13.94□□□□□ -0.18
MSH5-215ENST00000482280 C1orf134Q5TEV5 83 aa13.94□□□□□ -0.18
MSH5-215ENST00000482280 Q6ZTI0 123 aa13.94□□□□□ -0.18
MSH5-215ENST00000482280 ZFAND2AQ8N6M9 145 aa13.94□□□□□ -0.18
MSH5-215ENST00000482280 OR10G4Q8NGN3 311 aa13.94□□□□□ -0.18
MSH5-215ENST00000482280 OR10G9Q8NGN4 311 aa13.94□□□□□ -0.18
MSH5-215ENST00000482280 OR10G7Q8NGN6 311 aa13.94□□□□□ -0.18
MSH5-215ENST00000482280 OTORQ9NRC9 128 aa13.94□□□□□ -0.18
MSH5-215ENST00000482280 RPH3ALQ9UNE2 315 aa13.94□□□□□ -0.18
MSH5-215ENST00000482280 INO80EQ8NBZ0 244 aaPredicted RBP13.93□□□□□ -0.18
MSH5-215ENST00000482280 ASB13Q8WXK3 278 aa13.93□□□□□ -0.18
MSH5-215ENST00000482280 ZNF503Q96F45 646 aa13.93□□□□□ -0.18
MSH5-215ENST00000482280 TMPRSS5Q9H3S3 457 aa13.93□□□□□ -0.18
MSH5-215ENST00000482280 WFDC1Q9HC57 220 aa13.93□□□□□ -0.18
MSH5-215ENST00000482280 PGPA6NDG6 321 aa13.92□□□□□ -0.18
MSH5-215ENST00000482280 TCL1AP56279 114 aa13.92□□□□□ -0.18
MSH5-215ENST00000482280 ZNF415Q09FC8 603 aa13.92□□□□□ -0.18
MSH5-215ENST00000482280 Q6ZR54 194 aa13.92□□□□□ -0.18
MSH5-215ENST00000482280 HSD17B11Q8NBQ5 300 aa13.92□□□□□ -0.18
MSH5-215ENST00000482280 LENEPQ9Y5L5 61 aa13.92□□□□□ -0.18
MSH5-215ENST00000482280 DIRC3C9JPN6 131 aa13.91□□□□□ -0.18
MSH5-215ENST00000482280 H3BNG1 76 aa13.91□□□□□ -0.18
MSH5-215ENST00000482280 MBP02144 154 aa13.91□□□□□ -0.18
MSH5-215ENST00000482280 RAB2AP61019 212 aa13.91□□□□□ -0.18
MSH5-215ENST00000482280 FAM159AQ6UWV7 190 aa13.91□□□□□ -0.18
MSH5-215ENST00000482280 SSX7Q7RTT5 188 aa13.91□□□□□ -0.18
MSH5-215ENST00000482280 C11orf72Q8NBR9 251 aa13.91□□□□□ -0.18
MSH5-215ENST00000482280 RTL8CO15255 209 aa13.9□□□□□ -0.18
MSH5-215ENST00000482280 HOXA5P20719 270 aa13.9□□□□□ -0.18
MSH5-215ENST00000482280 CDC34P49427 236 aaPredicted RBP13.9□□□□□ -0.18
MSH5-215ENST00000482280 AQP10Q96PS8 301 aa13.9□□□□□ -0.18
MSH5-215ENST00000482280 KLF12Q9Y4X4 402 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms