RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 ZNF705AQ6ZN79 300 aaPredicted RBP10.96□□□□□ -0.65
ABCF3-213ENST00000480539 Q8TAT8 98 aa10.96□□□□□ -0.65
ABCF3-213ENST00000480539 CMTM2Q8TAZ6 248 aa10.96□□□□□ -0.65
ABCF3-213ENST00000480539 SUN5Q8TC36 379 aa10.96□□□□□ -0.65
ABCF3-213ENST00000480539 AGPAT4-IT1Q9H0P7 198 aa10.96□□□□□ -0.65
ABCF3-213ENST00000480539 C11orf68Q9H3H3 251 aaKnown RBP10.96□□□□□ -0.65
ABCF3-213ENST00000480539 GOLT1BQ9Y3E0 138 aa10.96□□□□□ -0.65
ABCF3-213ENST00000480539 GGTLC3B5MD39 225 aa10.95□□□□□ -0.66
ABCF3-213ENST00000480539 DIRC3C9JPN6 131 aa10.95□□□□□ -0.66
ABCF3-213ENST00000480539 SLC25A5P05141 298 aaKnown RBP10.95□□□□□ -0.66
ABCF3-213ENST00000480539 MIFP14174 115 aa10.95□□□□□ -0.66
ABCF3-213ENST00000480539 LEPP41159 167 aa10.95□□□□□ -0.66
ABCF3-213ENST00000480539 ODF3Q96PU9 254 aa10.95□□□□□ -0.66
ABCF3-213ENST00000480539 TMEM208Q9BTX3 173 aa10.95□□□□□ -0.66
ABCF3-213ENST00000480539 TSPOP30536 169 aa10.94□□□□□ -0.66
ABCF3-213ENST00000480539 GFI1BQ5VTD9 330 aa10.94□□□□□ -0.66
ABCF3-213ENST00000480539 C9orf47Q6ZRZ4 202 aa10.94□□□□□ -0.66
ABCF3-213ENST00000480539 GOLT1AQ6ZVE7 132 aa10.94□□□□□ -0.66
ABCF3-213ENST00000480539 MUC7Q8TAX7 377 aa10.94□□□□□ -0.66
ABCF3-213ENST00000480539 RXFP4Q8TDU9 374 aa10.94□□□□□ -0.66
ABCF3-213ENST00000480539 YTHDF2Q9Y5A9 579 aaKnown RBP10.94□□□□□ -0.66
ABCF3-213ENST00000480539 EIF5AL1Q6IS14 154 aaKnown RBP10.93□□□□□ -0.66
ABCF3-213ENST00000480539 DPPA3Q6W0C5 159 aa10.93□□□□□ -0.66
ABCF3-213ENST00000480539 C5orf17Q8NAS9 161 aa10.93□□□□□ -0.66
ABCF3-213ENST00000480539 SFT2D1Q8WV19 159 aa10.93□□□□□ -0.66
ABCF3-213ENST00000480539 LINC00477Q96M19 166 aa10.93□□□□□ -0.66
ABCF3-213ENST00000480539 BOLA1Q9Y3E2 137 aa10.93□□□□□ -0.66
ABCF3-213ENST00000480539 TRAV8-1A0A0A6YYK1 113 aa10.92□□□□□ -0.66
ABCF3-213ENST00000480539 A0A1W2PRE2 83 aa10.92□□□□□ -0.66
ABCF3-213ENST00000480539 RBAKDNA6NC62 111 aa10.92□□□□□ -0.66
ABCF3-213ENST00000480539 ZNF138P52744 262 aa10.92□□□□□ -0.66
ABCF3-213ENST00000480539 SUMO1P63165 101 aaKnown RBP10.92□□□□□ -0.66
ABCF3-213ENST00000480539 ZFAND6Q6FIF0 208 aa10.92□□□□□ -0.66
ABCF3-213ENST00000480539 IL17DQ8TAD2 202 aa10.92□□□□□ -0.66
ABCF3-213ENST00000480539 FAM19A4Q96LR4 140 aa10.92□□□□□ -0.66
ABCF3-213ENST00000480539 NEU1Q99519 415 aa10.92□□□□□ -0.66
ABCF3-213ENST00000480539 ZNF492Q9P255 531 aa10.92□□□□□ -0.66
ABCF3-213ENST00000480539 TRAV12-3A0A0B4J271 114 aa10.91□□□□□ -0.66
ABCF3-213ENST00000480539 FAM74A7A6NL05 159 aa10.91□□□□□ -0.66
ABCF3-213ENST00000480539 ZNF705GA8MUZ8 300 aaPredicted RBP10.91□□□□□ -0.66
ABCF3-213ENST00000480539 HBE1P02100 147 aa10.91□□□□□ -0.66
ABCF3-213ENST00000480539 PRM2P04554 102 aa10.91□□□□□ -0.66
ABCF3-213ENST00000480539 H2AFB1P0C5Y9 115 aa10.91□□□□□ -0.66
ABCF3-213ENST00000480539 SULT1A2P50226 295 aa10.91□□□□□ -0.66
ABCF3-213ENST00000480539 BTN1A1Q13410 526 aa10.91□□□□□ -0.66
ABCF3-213ENST00000480539 PMS2P11Q13670 270 aa10.91□□□□□ -0.66
ABCF3-213ENST00000480539 PRR9Q5T870 116 aa10.91□□□□□ -0.66
ABCF3-213ENST00000480539 MBD3L1Q8WWY6 194 aa10.91□□□□□ -0.66
ABCF3-213ENST00000480539 LOC102723971A0A1B0GUV8 181 aa10.9□□□□□ -0.66
ABCF3-213ENST00000480539 C7orf71A4D174 169 aa10.9□□□□□ -0.66
ABCF3-213ENST00000480539 KLLNB2CW77 178 aa10.9□□□□□ -0.66
ABCF3-213ENST00000480539 IFNA7P01567 189 aa10.9□□□□□ -0.66
ABCF3-213ENST00000480539 TCRAP04437 139 aa10.9□□□□□ -0.66
ABCF3-213ENST00000480539 RAB5CP51148 216 aa10.9□□□□□ -0.66
ABCF3-213ENST00000480539 EMP1P54849 157 aa10.9□□□□□ -0.66
ABCF3-213ENST00000480539 RRN3P1Q2M238 152 aa10.9□□□□□ -0.66
ABCF3-213ENST00000480539 ALKAL2Q6UX46 152 aa10.9□□□□□ -0.66
ABCF3-213ENST00000480539 TMEM256Q8N2U0 113 aa10.9□□□□□ -0.66
ABCF3-213ENST00000480539 ZFAND2AQ8N6M9 145 aa10.9□□□□□ -0.66
ABCF3-213ENST00000480539 SGK494Q96LW2 274 aa10.9□□□□□ -0.66
ABCF3-213ENST00000480539 LINC01587Q99440 93 aa10.9□□□□□ -0.66
ABCF3-213ENST00000480539 EPDR1Q9UM22 224 aa10.9□□□□□ -0.66
ABCF3-213ENST00000480539 CELA1Q9UNI1 258 aa10.9□□□□□ -0.66
ABCF3-213ENST00000480539 GPX1P07203 203 aa10.89□□□□□ -0.67
ABCF3-213ENST00000480539 HTN1P15515 57 aa10.89□□□□□ -0.67
ABCF3-213ENST00000480539 CRISP2P16562 243 aa10.89□□□□□ -0.67
ABCF3-213ENST00000480539 RNASE4P34096 147 aaKnown RBP10.89□□□□□ -0.67
ABCF3-213ENST00000480539 ATP5G3P48201 142 aa10.89□□□□□ -0.67
ABCF3-213ENST00000480539 NANOS2P60321 138 aaKnown RBP10.89□□□□□ -0.67
ABCF3-213ENST00000480539 ARL6IP6Q8N6S5 226 aa10.89□□□□□ -0.67
ABCF3-213ENST00000480539 NIPSNAP3BQ9BS92 247 aa10.89□□□□□ -0.67
ABCF3-213ENST00000480539 STARD9Q9P2P6 4700 aa10.89□□□□□ -0.67
ABCF3-213ENST00000480539 SMIM9A6NGZ8 99 aa10.88□□□□□ -0.67
ABCF3-213ENST00000480539 F6UZH7 168 aa10.88□□□□□ -0.67
ABCF3-213ENST00000480539 H7BYZ3 331 aa10.88□□□□□ -0.67
ABCF3-213ENST00000480539 PAGE4O60829 102 aa10.88□□□□□ -0.67
ABCF3-213ENST00000480539 CST9LP1Q5W188 147 aa10.88□□□□□ -0.67
ABCF3-213ENST00000480539 CYB561D1Q8N8Q1 229 aa10.88□□□□□ -0.67
ABCF3-213ENST00000480539 C20orf144Q9BQM9 153 aa10.88□□□□□ -0.67
ABCF3-213ENST00000480539 ATG101Q9BSB4 218 aa10.88□□□□□ -0.67
ABCF3-213ENST00000480539 SERTM2A0A1B0GWG4 89 aa10.87□□□□□ -0.67
ABCF3-213ENST00000480539 CXorf65A6NEN9 183 aa10.87□□□□□ -0.67
ABCF3-213ENST00000480539 C3orf84H3BNL1 204 aa10.87□□□□□ -0.67
ABCF3-213ENST00000480539 K7EQM0 130 aa10.87□□□□□ -0.67
ABCF3-213ENST00000480539 PEX7O00628 323 aa10.87□□□□□ -0.67
ABCF3-213ENST00000480539 AZU1P20160 251 aa10.87□□□□□ -0.67
ABCF3-213ENST00000480539 TAS2R60P59551 318 aa10.87□□□□□ -0.67
ABCF3-213ENST00000480539 Q6ZQT7 251 aa10.87□□□□□ -0.67
ABCF3-213ENST00000480539 C11orf45Q8TAV5 145 aa10.87□□□□□ -0.67
ABCF3-213ENST00000480539 ARL2-SNX15V9GYD0 113 aa10.87□□□□□ -0.67
ABCF3-213ENST00000480539 CSMD3Q7Z407 3707 aa10.87□□□□□ -0.67
ABCF3-213ENST00000480539 TMEM189A5PLL7 270 aa10.86□□□□□ -0.67
ABCF3-213ENST00000480539 CCL20P78556 96 aa10.86□□□□□ -0.67
ABCF3-213ENST00000480539 CASC10Q5T4H9 136 aa10.86□□□□□ -0.67
ABCF3-213ENST00000480539 ZNF767PQ75MW2 155 aa10.86□□□□□ -0.67
ABCF3-213ENST00000480539 TMEM75Q8N9X5 138 aa10.86□□□□□ -0.67
ABCF3-213ENST00000480539 LINC00479Q96M42 142 aa10.86□□□□□ -0.67
ABCF3-213ENST00000480539 NKX6-2Q9C056 277 aaPredicted RBP10.86□□□□□ -0.67
ABCF3-213ENST00000480539 GNG13Q9P2W3 67 aa10.86□□□□□ -0.67
ABCF3-213ENST00000480539 LENEPQ9Y5L5 61 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms