RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 B5MCH6 92 aa8.31□□□□□ -1.08
SIK3-210ENST00000480468 TEX22C9J3V5 150 aa8.31□□□□□ -1.08
SIK3-210ENST00000480468 RHODO00212 210 aa8.31□□□□□ -1.08
SIK3-210ENST00000480468 LGALS1P09382 135 aaKnown RBP8.31□□□□□ -1.08
SIK3-210ENST00000480468 NHLRC4P0CG21 123 aaPredicted RBP8.31□□□□□ -1.08
SIK3-210ENST00000480468 PSMB2P49721 201 aa8.31□□□□□ -1.08
SIK3-210ENST00000480468 ZNF491Q8N8L2 437 aa8.31□□□□□ -1.08
SIK3-210ENST00000480468 ARFGEF3Q5TH69 2177 aa8.31□□□□□ -1.08
SIK3-210ENST00000480468 PLXNB1O43157 2135 aa8.31□□□□□ -1.08
SIK3-210ENST00000480468 SVILO95425 2214 aa8.3□□□□□ -1.08
SIK3-210ENST00000480468 INTS1Q8N201 2190 aaKnown RBP8.3□□□□□ -1.08
SIK3-210ENST00000480468 LINC01549A6NIU2 74 aa8.3□□□□□ -1.08
SIK3-210ENST00000480468 A8MWV9 139 aa8.3□□□□□ -1.08
SIK3-210ENST00000480468 GAS8-AS1O95177 125 aa8.3□□□□□ -1.08
SIK3-210ENST00000480468 IGHG3P01860 377 aa8.3□□□□□ -1.08
SIK3-210ENST00000480468 ASIPP42127 132 aa8.3□□□□□ -1.08
SIK3-210ENST00000480468 TNFAIP6P98066 277 aaPredicted RBP8.3□□□□□ -1.08
SIK3-210ENST00000480468 RNF125Q96EQ8 232 aa8.3□□□□□ -1.08
SIK3-210ENST00000480468 SRSF8Q9BRL6 282 aaKnown RBP8.3□□□□□ -1.08
SIK3-210ENST00000480468 MSRB1Q9NZV6 116 aa8.3□□□□□ -1.08
SIK3-210ENST00000480468 COL27A1Q8IZC6 1860 aaPredicted RBP8.3□□□□□ -1.08
SIK3-210ENST00000480468 CCL3L1P16619 93 aa8.3□□□□□ -1.08
SIK3-210ENST00000480468 C3orf36Q3SXR2 165 aa8.3□□□□□ -1.08
SIK3-210ENST00000480468 PIP4P1Q86T03 277 aa8.3□□□□□ -1.08
SIK3-210ENST00000480468 RAX2Q96IS3 184 aa8.3□□□□□ -1.08
SIK3-210ENST00000480468 PROCRQ9UNN8 238 aa8.3□□□□□ -1.08
SIK3-210ENST00000480468 SIGLEC9Q9Y336 463 aa8.3□□□□□ -1.08
SIK3-210ENST00000480468 FRYLO94915 3013 aa8.3□□□□□ -1.08
SIK3-210ENST00000480468 NDUFA3O95167 84 aa8.29□□□□□ -1.08
SIK3-210ENST00000480468 IGHV1-46P01743 117 aa8.29□□□□□ -1.08
SIK3-210ENST00000480468 CFIP05156 583 aa8.29□□□□□ -1.08
SIK3-210ENST00000480468 TMEM78Q5T7P6 136 aa8.29□□□□□ -1.08
SIK3-210ENST00000480468 TMEM200BQ69YZ2 307 aa8.29□□□□□ -1.08
SIK3-210ENST00000480468 Q6Q795 121 aa8.29□□□□□ -1.08
SIK3-210ENST00000480468 IL17RELQ6ZVW7 336 aa8.29□□□□□ -1.08
SIK3-210ENST00000480468 DTX2Q86UW9 622 aa8.29□□□□□ -1.08
SIK3-210ENST00000480468 C9orf106Q8NAJ2 232 aa8.29□□□□□ -1.08
SIK3-210ENST00000480468 PTH2Q96A98 100 aa8.29□□□□□ -1.08
SIK3-210ENST00000480468 LOC107984156A0A0G2JMH3 177 aa8.29□□□□□ -1.08
SIK3-210ENST00000480468 GAGE12JA6NER3 117 aa8.29□□□□□ -1.08
SIK3-210ENST00000480468 GAGE7O76087 117 aa8.29□□□□□ -1.08
SIK3-210ENST00000480468 CD7P09564 240 aa8.29□□□□□ -1.08
SIK3-210ENST00000480468 GAGE12FP0CL80 117 aa8.29□□□□□ -1.08
SIK3-210ENST00000480468 GAGE12GP0CL81 117 aa8.29□□□□□ -1.08
SIK3-210ENST00000480468 GAGE12IP0CL82 117 aa8.29□□□□□ -1.08
SIK3-210ENST00000480468 ZNF80P51504 273 aaPredicted RBP8.29□□□□□ -1.08
SIK3-210ENST00000480468 GAGE4Q13068 117 aa8.29□□□□□ -1.08
SIK3-210ENST00000480468 ARL17AQ8IVW1 177 aa8.29□□□□□ -1.08
SIK3-210ENST00000480468 MED13Q9UHV7 2174 aa8.28□□□□□ -1.08
SIK3-210ENST00000480468 AHCTF1Q8WYP5 2266 aa8.28□□□□□ -1.08
SIK3-210ENST00000480468 IGHG4P01861 327 aa8.28□□□□□ -1.08
SIK3-210ENST00000480468 NDUFV3P56181 108 aaKnown RBP8.28□□□□□ -1.08
SIK3-210ENST00000480468 ZNF672Q499Z4 452 aaPredicted RBP8.28□□□□□ -1.08
SIK3-210ENST00000480468 SHISA2Q6UWI4 295 aa8.28□□□□□ -1.08
SIK3-210ENST00000480468 ZFP2Q6ZN57 461 aa8.28□□□□□ -1.08
SIK3-210ENST00000480468 NRACQ8N912 160 aa8.28□□□□□ -1.08
SIK3-210ENST00000480468 FBXL15Q9H469 300 aa8.28□□□□□ -1.08
SIK3-210ENST00000480468 COL6A3P12111 3177 aa8.28□□□□□ -1.08
SIK3-210ENST00000480468 FAM90A27PA6NNH2 459 aa8.27□□□□□ -1.08
SIK3-210ENST00000480468 FABP5P3A8MUU1 101 aa8.27□□□□□ -1.08
SIK3-210ENST00000480468 K7EIM0 57 aa8.27□□□□□ -1.08
SIK3-210ENST00000480468 ENSAO43768 121 aaKnown RBP8.27□□□□□ -1.08
SIK3-210ENST00000480468 GATA1P15976 413 aaPredicted RBP8.27□□□□□ -1.08
SIK3-210ENST00000480468 PPP1R27Q86WC6 154 aa8.27□□□□□ -1.08
SIK3-210ENST00000480468 RAXQ9Y2V3 346 aa8.27□□□□□ -1.08
SIK3-210ENST00000480468 IGKV2-40A0A087WW87 121 aaPredicted RBP8.27□□□□□ -1.09
SIK3-210ENST00000480468 IGKV2D-40P01614 121 aaPredicted RBP8.27□□□□□ -1.09
SIK3-210ENST00000480468 APELAP0DMC3 54 aa8.27□□□□□ -1.09
SIK3-210ENST00000480468 SLC25A16P16260 332 aa8.27□□□□□ -1.09
SIK3-210ENST00000480468 GAGE2BQ13066 116 aa8.27□□□□□ -1.09
SIK3-210ENST00000480468 GAGE2EQ4V326 116 aa8.27□□□□□ -1.09
SIK3-210ENST00000480468 ZNF474Q6S9Z5 364 aaPredicted RBP8.27□□□□□ -1.09
SIK3-210ENST00000480468 ANKRD29Q8N6D5 301 aa8.27□□□□□ -1.09
SIK3-210ENST00000480468 RAB1BQ9H0U4 201 aa8.27□□□□□ -1.09
SIK3-210ENST00000480468 GAGE2DQ9UEU5 116 aa8.27□□□□□ -1.09
SIK3-210ENST00000480468 ABCA1O95477 2261 aa8.27□□□□□ -1.09
SIK3-210ENST00000480468 TCL1BO95988 128 aa8.26□□□□□ -1.09
SIK3-210ENST00000480468 ORM1P02763 201 aa8.26□□□□□ -1.09
SIK3-210ENST00000480468 RPL32P62910 135 aaKnown RBP8.26□□□□□ -1.09
SIK3-210ENST00000480468 NDUFA11Q86Y39 141 aa8.26□□□□□ -1.09
SIK3-210ENST00000480468 CENPVL3A0A0U1RRI6 287 aa8.26□□□□□ -1.09
SIK3-210ENST00000480468 M0R1B8 84 aa8.26□□□□□ -1.09
SIK3-210ENST00000480468 COX6B1P14854 86 aa8.26□□□□□ -1.09
SIK3-210ENST00000480468 DLX6P56179 175 aa8.26□□□□□ -1.09
SIK3-210ENST00000480468 HERV-K104P63124 156 aa8.26□□□□□ -1.09
SIK3-210ENST00000480468 NEXN-AS1Q8NBZ9 246 aa8.26□□□□□ -1.09
SIK3-210ENST00000480468 AJUBAQ96IF1 538 aa8.26□□□□□ -1.09
SIK3-210ENST00000480468 PRADC1Q9BSG0 188 aa8.26□□□□□ -1.09
SIK3-210ENST00000480468 CEP290O15078 2479 aa8.26□□□□□ -1.09
SIK3-210ENST00000480468 ZNF815PA8K554 130 aa8.25□□□□□ -1.09
SIK3-210ENST00000480468 RPL7P18124 248 aaKnown RBP8.25□□□□□ -1.09
SIK3-210ENST00000480468 CADP27708 2225 aa8.25□□□□□ -1.09
SIK3-210ENST00000480468 FCN3O75636 299 aa8.25□□□□□ -1.09
SIK3-210ENST00000480468 SNCGO76070 127 aa8.25□□□□□ -1.09
SIK3-210ENST00000480468 PRB4P10163 310 aaPredicted RBP8.25□□□□□ -1.09
SIK3-210ENST00000480468 CNTFRP26992 372 aa8.25□□□□□ -1.09
SIK3-210ENST00000480468 EFNA4P52798 201 aa8.25□□□□□ -1.09
SIK3-210ENST00000480468 SRSF9Q13242 221 aaKnown RBP eCLIP8.25□□□□□ -1.09
SIK3-210ENST00000480468 ORMDL2Q53FV1 153 aa8.25□□□□□ -1.09
SIK3-210ENST00000480468 TMEM105Q8N8V8 129 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms