RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 ZNF253O75346 499 aa4.77□□□□□ -1.65
HERC4-210ENST00000480158 TCRAP04437 139 aa4.77□□□□□ -1.65
HERC4-210ENST00000480158 CTAG1AP78358 180 aa4.77□□□□□ -1.65
HERC4-210ENST00000480158 CCDC28AQ8IWP9 274 aa4.77□□□□□ -1.65
HERC4-210ENST00000480158 LYPD1Q8N2G4 141 aa4.77□□□□□ -1.65
HERC4-210ENST00000480158 C5orf17Q8NAS9 161 aa4.77□□□□□ -1.65
HERC4-210ENST00000480158 MED9Q9NWA0 146 aa4.77□□□□□ -1.65
HERC4-210ENST00000480158 PEX7O00628 323 aa4.76□□□□□ -1.65
HERC4-210ENST00000480158 RPL35AP18077 110 aaKnown RBP4.76□□□□□ -1.65
HERC4-210ENST00000480158 FXYD7P58549 80 aa4.76□□□□□ -1.65
HERC4-210ENST00000480158 ZNF506Q5JVG8 444 aa4.76□□□□□ -1.65
HERC4-210ENST00000480158 EBLN2Q6P2I7 272 aa4.76□□□□□ -1.65
HERC4-210ENST00000480158 CYB561D1Q8N8Q1 229 aa4.76□□□□□ -1.65
HERC4-210ENST00000480158 NHLRC2Q8NBF2 726 aa4.76□□□□□ -1.65
HERC4-210ENST00000480158 LOC105371267A0A1B0GV96 52 aa4.76□□□□□ -1.65
HERC4-210ENST00000480158 RAB19A4D1S5 217 aa4.76□□□□□ -1.65
HERC4-210ENST00000480158 CNN1P51911 297 aaKnown RBP4.76□□□□□ -1.65
HERC4-210ENST00000480158 PEA15Q15121 130 aa4.76□□□□□ -1.65
HERC4-210ENST00000480158 PRNTQ86SH4 94 aa4.76□□□□□ -1.65
HERC4-210ENST00000480158 OR8A1Q8NGG7 326 aa4.76□□□□□ -1.65
HERC4-210ENST00000480158 OR10J6PQ8NGY7 276 aa4.76□□□□□ -1.65
HERC4-210ENST00000480158 ATG101Q9BSB4 218 aa4.76□□□□□ -1.65
HERC4-210ENST00000480158 SSBP4Q9BWG4 385 aaPredicted RBP4.76□□□□□ -1.65
HERC4-210ENST00000480158 GPR61Q9BZJ8 451 aa4.76□□□□□ -1.65
HERC4-210ENST00000480158 NKX6-2Q9C056 277 aaPredicted RBP4.76□□□□□ -1.65
HERC4-210ENST00000480158 AURKAIP1Q9NWT8 199 aaPredicted RBP4.76□□□□□ -1.65
HERC4-210ENST00000480158 TRAV2A0A0B4J234 112 aa4.75□□□□□ -1.65
HERC4-210ENST00000480158 A0A0J9YX75 114 aa4.75□□□□□ -1.65
HERC4-210ENST00000480158 PGPEP1LA6NFU8 196 aa4.75□□□□□ -1.65
HERC4-210ENST00000480158 WIPF1O43516 503 aa4.75□□□□□ -1.65
HERC4-210ENST00000480158 PDE6DO43924 150 aa4.75□□□□□ -1.65
HERC4-210ENST00000480158 AKR1C3P42330 323 aa4.75□□□□□ -1.65
HERC4-210ENST00000480158 SAMD13Q5VXD3 122 aa4.75□□□□□ -1.65
HERC4-210ENST00000480158 STHQ8IWL8 128 aa4.75□□□□□ -1.65
HERC4-210ENST00000480158 AGPAT4-IT1Q9H0P7 198 aa4.75□□□□□ -1.65
HERC4-210ENST00000480158 C19orf73Q9NVV2 129 aa4.75□□□□□ -1.65
HERC4-210ENST00000480158 PPP1R14DQ9NXH3 145 aa4.75□□□□□ -1.65
HERC4-210ENST00000480158 LINC00862A6NCI5 91 aa4.75□□□□□ -1.65
HERC4-210ENST00000480158 F6UZH7 168 aa4.75□□□□□ -1.65
HERC4-210ENST00000480158 K7EQM0 130 aa4.75□□□□□ -1.65
HERC4-210ENST00000480158 M0R2Z0 102 aa4.75□□□□□ -1.65
HERC4-210ENST00000480158 SRP19P09132 144 aaKnown RBP4.75□□□□□ -1.65
HERC4-210ENST00000480158 RPL35P42766 123 aaKnown RBP4.75□□□□□ -1.65
HERC4-210ENST00000480158 UBE2G1P62253 170 aa4.75□□□□□ -1.65
HERC4-210ENST00000480158 EGFEM1PQ0D2K5 195 aa4.75□□□□□ -1.65
HERC4-210ENST00000480158 KIR3DS1Q14943 382 aa4.75□□□□□ -1.65
HERC4-210ENST00000480158 TMEM78Q5T7P6 136 aa4.75□□□□□ -1.65
HERC4-210ENST00000480158 HIST1H2BAQ96A08 127 aa4.75□□□□□ -1.65
HERC4-210ENST00000480158 SLC35B3Q9H1N7 401 aa4.75□□□□□ -1.65
HERC4-210ENST00000480158 SAV1Q9H4B6 383 aaPredicted RBP4.75□□□□□ -1.65
HERC4-210ENST00000480158 TUBA4BQ9H853 241 aa4.75□□□□□ -1.65
HERC4-210ENST00000480158 TRAV12-2A0A075B6T6 113 aa4.74□□□□□ -1.65
HERC4-210ENST00000480158 H3BMM0 161 aa4.74□□□□□ -1.65
HERC4-210ENST00000480158 SFTA3P0C7M3 94 aa4.74□□□□□ -1.65
HERC4-210ENST00000480158 CT45A10P0DMU9 189 aa4.74□□□□□ -1.65
HERC4-210ENST00000480158 SPINK13Q1W4C9 94 aa4.74□□□□□ -1.65
HERC4-210ENST00000480158 DEFB121Q5J5C9 76 aa4.74□□□□□ -1.65
HERC4-210ENST00000480158 FOXI2Q6ZQN5 318 aa4.74□□□□□ -1.65
HERC4-210ENST00000480158 C2CD4CQ8TF44 421 aa4.74□□□□□ -1.65
HERC4-210ENST00000480158 PARLQ9H300 379 aa4.74□□□□□ -1.65
HERC4-210ENST00000480158 SRD5A3Q9H8P0 318 aa4.74□□□□□ -1.65
HERC4-210ENST00000480158 CLEC5AQ9NY25 188 aa4.74□□□□□ -1.65
HERC4-210ENST00000480158 ARL2-SNX15V9GYD0 113 aa4.74□□□□□ -1.65
HERC4-210ENST00000480158 NBEAL2Q6ZNJ1 2754 aa4.74□□□□□ -1.65
HERC4-210ENST00000480158 AGRNO00468 2067 aa4.74□□□□□ -1.65
HERC4-210ENST00000480158 IGLV2-11P01706 119 aa4.74□□□□□ -1.65
HERC4-210ENST00000480158 IGHV4-30-4P0DP06 118 aa4.74□□□□□ -1.65
HERC4-210ENST00000480158 HLA-DRB4P13762 266 aa4.74□□□□□ -1.65
HERC4-210ENST00000480158 MALP21145 153 aa4.74□□□□□ -1.65
HERC4-210ENST00000480158 TAGLN2P37802 199 aaKnown RBP4.74□□□□□ -1.65
HERC4-210ENST00000480158 FLI1Q01543 452 aaPredicted RBP4.74□□□□□ -1.65
HERC4-210ENST00000480158 Q6ZQT7 251 aa4.74□□□□□ -1.65
HERC4-210ENST00000480158 MRPL53Q96EL3 112 aaKnown RBP4.74□□□□□ -1.65
HERC4-210ENST00000480158 TVP23CQ96ET8 276 aa4.74□□□□□ -1.65
HERC4-210ENST00000480158 C8orf49Q96NF6 230 aa4.74□□□□□ -1.65
HERC4-210ENST00000480158 PSG8Q9UQ74 426 aa4.74□□□□□ -1.65
HERC4-210ENST00000480158 HLA-DRB4X5D2U9 266 aa4.74□□□□□ -1.65
HERC4-210ENST00000480158 CMYA5Q8N3K9 4069 aa4.74□□□□□ -1.65
HERC4-210ENST00000480158 TRBV20OR9-2A0A075B6H5 130 aa4.73□□□□□ -1.65
HERC4-210ENST00000480158 KRTAP4-8A0A0G2JLE6 195 aa4.73□□□□□ -1.65
HERC4-210ENST00000480158 RBMY1BA6NDE4 496 aaKnown RBP4.73□□□□□ -1.65
HERC4-210ENST00000480158 RBMY1EA6NEQ0 496 aaKnown RBP4.73□□□□□ -1.65
HERC4-210ENST00000480158 ZNF727A8MUV8 499 aa4.73□□□□□ -1.65
HERC4-210ENST00000480158 RBMY1DP0C7P1 496 aaKnown RBP4.73□□□□□ -1.65
HERC4-210ENST00000480158 GNG4P50150 75 aa4.73□□□□□ -1.65
HERC4-210ENST00000480158 ZNF138P52744 262 aa4.73□□□□□ -1.65
HERC4-210ENST00000480158 CMC4P56277 68 aaPredicted RBP4.73□□□□□ -1.65
HERC4-210ENST00000480158 CENPWQ5EE01 88 aa4.73□□□□□ -1.65
HERC4-210ENST00000480158 SOHLH1Q5JUK2 328 aa4.73□□□□□ -1.65
HERC4-210ENST00000480158 PRR27Q6MZM9 219 aa4.73□□□□□ -1.65
HERC4-210ENST00000480158 SMIM7Q9BQ49 75 aa4.73□□□□□ -1.65
HERC4-210ENST00000480158 TXNDC17Q9BRA2 123 aa4.73□□□□□ -1.65
HERC4-210ENST00000480158 XCL2Q9UBD3 114 aa4.73□□□□□ -1.65
HERC4-210ENST00000480158 NPIPB6E9PJ23 425 aa4.73□□□□□ -1.65
HERC4-210ENST00000480158 TMEM250H0YL14 139 aa4.73□□□□□ -1.65
HERC4-210ENST00000480158 DUSP14O95147 198 aaKnown RBP4.73□□□□□ -1.65
HERC4-210ENST00000480158 MGST1P10620 155 aaKnown RBP4.73□□□□□ -1.65
HERC4-210ENST00000480158 RNASE4P34096 147 aaKnown RBP4.73□□□□□ -1.65
HERC4-210ENST00000480158 C9orf47Q6ZRZ4 202 aa4.73□□□□□ -1.65
HERC4-210ENST00000480158 Q86TA4 180 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms