RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 OR10J4P0C629 311 aa4.97□□□□□ -1.61
COL17A1-205ENST00000480127 IGLC2P0DOY2 106 aa4.97□□□□□ -1.61
COL17A1-205ENST00000480127 PYYP10082 97 aa4.97□□□□□ -1.61
COL17A1-205ENST00000480127 RPL29P47914 159 aaKnown RBP4.97□□□□□ -1.61
COL17A1-205ENST00000480127 DEFA1P59665 94 aa4.97□□□□□ -1.61
COL17A1-205ENST00000480127 DEFA3P59666 94 aa4.97□□□□□ -1.61
COL17A1-205ENST00000480127 CYCSP99999 105 aaKnown RBP4.97□□□□□ -1.61
COL17A1-205ENST00000480127 ERCC8Q13216 396 aa4.97□□□□□ -1.61
COL17A1-205ENST00000480127 TMEM252Q8N6L7 170 aa4.97□□□□□ -1.61
COL17A1-205ENST00000480127 OR5C1Q8NGR4 320 aa4.97□□□□□ -1.61
COL17A1-205ENST00000480127 CMTM2Q8TAZ6 248 aa4.97□□□□□ -1.61
COL17A1-205ENST00000480127 RNASE8Q8TDE3 154 aaKnown RBP4.97□□□□□ -1.61
COL17A1-205ENST00000480127 RXFP4Q8TDU9 374 aa4.97□□□□□ -1.61
COL17A1-205ENST00000480127 HYLS1Q96M11 299 aa4.97□□□□□ -1.61
COL17A1-205ENST00000480127 LINC00477Q96M19 166 aa4.97□□□□□ -1.61
COL17A1-205ENST00000480127 PAXXQ9BUH6 204 aa4.97□□□□□ -1.61
COL17A1-205ENST00000480127 Q9H8V8 135 aa4.97□□□□□ -1.61
COL17A1-205ENST00000480127 SCRT2Q9NQ03 307 aa4.97□□□□□ -1.61
COL17A1-205ENST00000480127 GSN-AS1Q9NRJ2 163 aa4.97□□□□□ -1.61
COL17A1-205ENST00000480127 NAGKQ9UJ70 344 aa4.97□□□□□ -1.61
COL17A1-205ENST00000480127 FUT9Q9Y231 359 aa4.97□□□□□ -1.61
COL17A1-205ENST00000480127 WDR83OSQ9Y284 106 aa4.97□□□□□ -1.61
COL17A1-205ENST00000480127 HERC1Q15751 4861 aa4.96□□□□□ -1.61
COL17A1-205ENST00000480127 TRBV19A0A075B6N1 114 aa4.96□□□□□ -1.62
COL17A1-205ENST00000480127 IGKV2-40A0A087WW87 121 aaPredicted RBP4.96□□□□□ -1.62
COL17A1-205ENST00000480127 TRGV4A0A0C4DH28 118 aa4.96□□□□□ -1.62
COL17A1-205ENST00000480127 NPIPB6E9PJ23 425 aa4.96□□□□□ -1.62
COL17A1-205ENST00000480127 M0R3E3 92 aa4.96□□□□□ -1.62
COL17A1-205ENST00000480127 PLA2G10O15496 165 aa4.96□□□□□ -1.62
COL17A1-205ENST00000480127 PAX4O43316 350 aa4.96□□□□□ -1.62
COL17A1-205ENST00000480127 IGKV2D-40P01614 121 aaPredicted RBP4.96□□□□□ -1.62
COL17A1-205ENST00000480127 CT45A10P0DMU9 189 aa4.96□□□□□ -1.62
COL17A1-205ENST00000480127 TAS2R45P59539 299 aa4.96□□□□□ -1.62
COL17A1-205ENST00000480127 UBE2L3P68036 154 aaKnown RBP4.96□□□□□ -1.62
COL17A1-205ENST00000480127 ZNF415Q09FC8 603 aa4.96□□□□□ -1.62
COL17A1-205ENST00000480127 BTN1A1Q13410 526 aa4.96□□□□□ -1.62
COL17A1-205ENST00000480127 PDE6HQ13956 83 aa4.96□□□□□ -1.62
COL17A1-205ENST00000480127 FAM74A1Q5RGS3 127 aa4.96□□□□□ -1.62
COL17A1-205ENST00000480127 MORN5Q5VZ52 161 aa4.96□□□□□ -1.62
COL17A1-205ENST00000480127 Q6ZTI0 123 aa4.96□□□□□ -1.62
COL17A1-205ENST00000480127 EXOC3-AS1Q8N2X6 119 aa4.96□□□□□ -1.62
COL17A1-205ENST00000480127 EIF4E3Q8N5X7 224 aaKnown RBP4.96□□□□□ -1.62
COL17A1-205ENST00000480127 SDHCQ99643 169 aaPredicted RBP4.96□□□□□ -1.62
COL17A1-205ENST00000480127 NPCDR1Q9BY65 106 aa4.96□□□□□ -1.62
COL17A1-205ENST00000480127 NMES1Q9C002 83 aa4.96□□□□□ -1.62
COL17A1-205ENST00000480127 OR51M1Q9H341 326 aa4.96□□□□□ -1.62
COL17A1-205ENST00000480127 TMPRSS5Q9H3S3 457 aa4.96□□□□□ -1.62
COL17A1-205ENST00000480127 LINC00588Q9Y4M8 146 aa4.96□□□□□ -1.62
COL17A1-205ENST00000480127 LRP1BQ9NZR2 4599 aa4.96□□□□□ -1.62
COL17A1-205ENST00000480127 ZNF253O75346 499 aa4.95□□□□□ -1.62
COL17A1-205ENST00000480127 SIX6O95475 246 aa4.95□□□□□ -1.62
COL17A1-205ENST00000480127 NBEAP1P0C6P0 100 aa4.95□□□□□ -1.62
COL17A1-205ENST00000480127 RANP62826 216 aaKnown RBP4.95□□□□□ -1.62
COL17A1-205ENST00000480127 KIR3DS1Q14943 382 aa4.95□□□□□ -1.62
COL17A1-205ENST00000480127 KHDC3LQ587J8 217 aa4.95□□□□□ -1.62
COL17A1-205ENST00000480127 FFAR4Q5NUL3 377 aa4.95□□□□□ -1.62
COL17A1-205ENST00000480127 MRPL53Q96EL3 112 aaKnown RBP4.95□□□□□ -1.62
COL17A1-205ENST00000480127 ODF3Q96PU9 254 aa4.95□□□□□ -1.62
COL17A1-205ENST00000480127 MRPL32Q9BYC8 188 aaKnown RBP4.95□□□□□ -1.62
COL17A1-205ENST00000480127 ZNF586Q9NXT0 402 aa4.95□□□□□ -1.62
COL17A1-205ENST00000480127 TMEM14CQ9P0S9 112 aa4.95□□□□□ -1.62
COL17A1-205ENST00000480127 ICOSQ9Y6W8 199 aa4.95□□□□□ -1.62
COL17A1-205ENST00000480127 NACAE9PAV3 2078 aa4.95□□□□□ -1.62
COL17A1-205ENST00000480127 APOBP04114 4563 aaKnown RBP4.94□□□□□ -1.62
COL17A1-205ENST00000480127 IGHV1OR15-1A0A075B7D0 117 aa4.94□□□□□ -1.62
COL17A1-205ENST00000480127 TRAV9-2A0A087WT02 112 aa4.94□□□□□ -1.62
COL17A1-205ENST00000480127 A0A096LPF7 62 aa4.94□□□□□ -1.62
COL17A1-205ENST00000480127 A0A1W2PPV4 95 aa4.94□□□□□ -1.62
COL17A1-205ENST00000480127 PLAC8L1A1L4L8 177 aa4.94□□□□□ -1.62
COL17A1-205ENST00000480127 MRPS12O15235 138 aaKnown RBP4.94□□□□□ -1.62
COL17A1-205ENST00000480127 PRAF2O60831 178 aa4.94□□□□□ -1.62
COL17A1-205ENST00000480127 NHLH2Q02577 135 aa4.94□□□□□ -1.62
COL17A1-205ENST00000480127 SLAQ13239 276 aa4.94□□□□□ -1.62
COL17A1-205ENST00000480127 ASAH1Q13510 395 aa4.94□□□□□ -1.62
COL17A1-205ENST00000480127 GCSAMLQ5JQS6 135 aa4.94□□□□□ -1.62
COL17A1-205ENST00000480127 MUC21Q5SSG8 566 aa4.94□□□□□ -1.62
COL17A1-205ENST00000480127 FAM159AQ6UWV7 190 aa4.94□□□□□ -1.62
COL17A1-205ENST00000480127 MIR17HGQ75NE6 70 aa4.94□□□□□ -1.62
COL17A1-205ENST00000480127 SPATA12Q7Z6I5 190 aa4.94□□□□□ -1.62
COL17A1-205ENST00000480127 IQCF2Q8IXL9 164 aa4.94□□□□□ -1.62
COL17A1-205ENST00000480127 ZNRF2Q8NHG8 242 aa4.94□□□□□ -1.62
COL17A1-205ENST00000480127 Q8TAT8 98 aa4.94□□□□□ -1.62
COL17A1-205ENST00000480127 SAT2Q96F10 170 aaPredicted RBP4.94□□□□□ -1.62
COL17A1-205ENST00000480127 ZNF503Q96F45 646 aa4.94□□□□□ -1.62
COL17A1-205ENST00000480127 SMIM3Q9BZL3 60 aa4.94□□□□□ -1.62
COL17A1-205ENST00000480127 MRPL16Q9NX20 251 aaKnown RBP4.94□□□□□ -1.62
COL17A1-205ENST00000480127 TRGV11A0A075B6L2 103 aa4.93□□□□□ -1.62
COL17A1-205ENST00000480127 INMT-MINDY4F8WBC2 141 aa4.93□□□□□ -1.62
COL17A1-205ENST00000480127 SIVA1O15304 175 aa4.93□□□□□ -1.62
COL17A1-205ENST00000480127 SRIP30626 198 aa4.93□□□□□ -1.62
COL17A1-205ENST00000480127 ZNF138P52744 262 aa4.93□□□□□ -1.62
COL17A1-205ENST00000480127 CD300CQ08708 224 aa4.93□□□□□ -1.62
COL17A1-205ENST00000480127 DAZ2Q13117 558 aaKnown RBP4.93□□□□□ -1.62
COL17A1-205ENST00000480127 TMEM183BQ1AE95 376 aa4.93□□□□□ -1.62
COL17A1-205ENST00000480127 VWC2Q2TAL6 325 aa4.93□□□□□ -1.62
COL17A1-205ENST00000480127 TMEM183AQ8IXX5 376 aa4.93□□□□□ -1.62
COL17A1-205ENST00000480127 NHLRC2Q8NBF2 726 aa4.93□□□□□ -1.62
COL17A1-205ENST00000480127 C8orf49Q96NF6 230 aa4.93□□□□□ -1.62
COL17A1-205ENST00000480127 ATP5SQ99766 215 aa4.93□□□□□ -1.62
COL17A1-205ENST00000480127 VGLL1Q99990 258 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms