RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 OR5A1Q8NGJ0 315 aa4.78□□□□□ -1.64
SF3B1-209ENST00000479532 FAM213BQ8TBF2 198 aa4.78□□□□□ -1.64
SF3B1-209ENST00000479532 WIPF2Q8TF74 440 aaPredicted RBP4.78□□□□□ -1.64
SF3B1-209ENST00000479532 C4orf3Q8WVX3 66 aa4.78□□□□□ -1.64
SF3B1-209ENST00000479532 PARLQ9H300 379 aa4.78□□□□□ -1.64
SF3B1-209ENST00000479532 NF1P21359 2839 aa4.78□□□□□ -1.65
SF3B1-209ENST00000479532 IGLV11-55A0A075B6I3 123 aa4.77□□□□□ -1.65
SF3B1-209ENST00000479532 TRBV7-1A0A0A6YYK4 115 aa4.77□□□□□ -1.65
SF3B1-209ENST00000479532 GAGE10A6NGK3 116 aa4.77□□□□□ -1.65
SF3B1-209ENST00000479532 SSSCA1O60232 199 aa4.77□□□□□ -1.65
SF3B1-209ENST00000479532 ZNF253O75346 499 aa4.77□□□□□ -1.65
SF3B1-209ENST00000479532 OR2J3O76001 311 aa4.77□□□□□ -1.65
SF3B1-209ENST00000479532 MT-CO2P00403 227 aa4.77□□□□□ -1.65
SF3B1-209ENST00000479532 LGALS1P09382 135 aaKnown RBP4.77□□□□□ -1.65
SF3B1-209ENST00000479532 IAPPP10997 89 aa4.77□□□□□ -1.65
SF3B1-209ENST00000479532 NPY1RP25929 384 aa4.77□□□□□ -1.65
SF3B1-209ENST00000479532 KRTAP10-3P60369 221 aa4.77□□□□□ -1.65
SF3B1-209ENST00000479532 KRTAP10-11P60412 298 aa4.77□□□□□ -1.65
SF3B1-209ENST00000479532 S100A10P60903 97 aa4.77□□□□□ -1.65
SF3B1-209ENST00000479532 SEC11AP67812 179 aa4.77□□□□□ -1.65
SF3B1-209ENST00000479532 VAMP3Q15836 100 aa4.77□□□□□ -1.65
SF3B1-209ENST00000479532 C15orf32Q32M92 178 aa4.77□□□□□ -1.65
SF3B1-209ENST00000479532 SUMO4Q6EEV6 95 aa4.77□□□□□ -1.65
SF3B1-209ENST00000479532 Q6ZN92 141 aa4.77□□□□□ -1.65
SF3B1-209ENST00000479532 OR2G3Q8NGZ4 309 aa4.77□□□□□ -1.65
SF3B1-209ENST00000479532 VN1R17PQ8TDU5 208 aa4.77□□□□□ -1.65
SF3B1-209ENST00000479532 SFRP2Q96HF1 295 aa4.77□□□□□ -1.65
SF3B1-209ENST00000479532 RAB40CQ96S21 281 aa4.77□□□□□ -1.65
SF3B1-209ENST00000479532 FAM110AQ9BQ89 295 aa4.77□□□□□ -1.65
SF3B1-209ENST00000479532 PMCHL2Q9BQD1 86 aa4.77□□□□□ -1.65
SF3B1-209ENST00000479532 TM2D2Q9BX73 214 aa4.77□□□□□ -1.65
SF3B1-209ENST00000479532 C11orf1Q9H5F2 150 aa4.77□□□□□ -1.65
SF3B1-209ENST00000479532 ST20Q9HBF5 79 aa4.77□□□□□ -1.65
SF3B1-209ENST00000479532 RNF24Q9Y225 148 aa4.77□□□□□ -1.65
SF3B1-209ENST00000479532 LSM5Q9Y4Y9 91 aaKnown RBP4.77□□□□□ -1.65
SF3B1-209ENST00000479532 TNCP24821 2201 aa4.77□□□□□ -1.65
SF3B1-209ENST00000479532 LINC01619G3V211 115 aa4.76□□□□□ -1.65
SF3B1-209ENST00000479532 TSPAN13O95857 204 aa4.76□□□□□ -1.65
SF3B1-209ENST00000479532 IGHV3-11P01762 117 aa4.76□□□□□ -1.65
SF3B1-209ENST00000479532 LINC00869P0C866 280 aa4.76□□□□□ -1.65
SF3B1-209ENST00000479532 IGLC1P0CG04 106 aa4.76□□□□□ -1.65
SF3B1-209ENST00000479532 RNASE2P10153 161 aaKnown RBP4.76□□□□□ -1.65
SF3B1-209ENST00000479532 MYCNOSP40205 109 aa4.76□□□□□ -1.65
SF3B1-209ENST00000479532 OPRK1P41145 380 aa4.76□□□□□ -1.65
SF3B1-209ENST00000479532 MFAP4P55083 255 aa4.76□□□□□ -1.65
SF3B1-209ENST00000479532 TAS2R30P59541 319 aa4.76□□□□□ -1.65
SF3B1-209ENST00000479532 RUNX1Q01196 453 aa4.76□□□□□ -1.65
SF3B1-209ENST00000479532 SPATA45Q537H7 98 aa4.76□□□□□ -1.65
SF3B1-209ENST00000479532 C2orf83Q53S99 150 aa4.76□□□□□ -1.65
SF3B1-209ENST00000479532 Q56UQ5 140 aa4.76□□□□□ -1.65
SF3B1-209ENST00000479532 FAM162BQ5T6X4 162 aa4.76□□□□□ -1.65
SF3B1-209ENST00000479532 UFSP1Q6NVU6 142 aa4.76□□□□□ -1.65
SF3B1-209ENST00000479532 MYOZ3Q8TDC0 251 aa4.76□□□□□ -1.65
SF3B1-209ENST00000479532 SIGMAR1Q99720 223 aa4.76□□□□□ -1.65
SF3B1-209ENST00000479532 RARRES2Q99969 163 aa4.76□□□□□ -1.65
SF3B1-209ENST00000479532 GNB4Q9HAV0 340 aa4.76□□□□□ -1.65
SF3B1-209ENST00000479532 MANBALQ9NQG1 85 aa4.76□□□□□ -1.65
SF3B1-209ENST00000479532 CLEC5AQ9NY25 188 aa4.76□□□□□ -1.65
SF3B1-209ENST00000479532 C21orf62Q9NYP8 219 aa4.76□□□□□ -1.65
SF3B1-209ENST00000479532 PSENENQ9NZ42 101 aa4.76□□□□□ -1.65
SF3B1-209ENST00000479532 RCL1Q9Y2P8 373 aaKnown RBP4.76□□□□□ -1.65
SF3B1-209ENST00000479532 TIMM9Q9Y5J7 89 aa4.76□□□□□ -1.65
SF3B1-209ENST00000479532 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.75□□□□□ -1.65
SF3B1-209ENST00000479532 CCL24O00175 119 aa4.75□□□□□ -1.65
SF3B1-209ENST00000479532 ZNF207O43670 478 aaKnown RBP4.75□□□□□ -1.65
SF3B1-209ENST00000479532 GNG7O60262 68 aa4.75□□□□□ -1.65
SF3B1-209ENST00000479532 ATP6V0CP27449 155 aa4.75□□□□□ -1.65
SF3B1-209ENST00000479532 ARL3P36405 182 aa4.75□□□□□ -1.65
SF3B1-209ENST00000479532 TFPI2P48307 235 aa4.75□□□□□ -1.65
SF3B1-209ENST00000479532 KRTAP10-7P60409 375 aaPredicted RBP4.75□□□□□ -1.65
SF3B1-209ENST00000479532 EWSR1Q01844 656 aaKnown RBP eCLIP4.75□□□□□ -1.65
SF3B1-209ENST00000479532 SLAQ13239 276 aa4.75□□□□□ -1.65
SF3B1-209ENST00000479532 BATFQ16520 125 aa4.75□□□□□ -1.65
SF3B1-209ENST00000479532 RPEL1Q2QD12 228 aa4.75□□□□□ -1.65
SF3B1-209ENST00000479532 KLK9Q2XQG4 91 aa4.75□□□□□ -1.65
SF3B1-209ENST00000479532 SPANXN5Q5MJ07 72 aa4.75□□□□□ -1.65
SF3B1-209ENST00000479532 TMEM182Q6ZP80 229 aaPredicted RBP4.75□□□□□ -1.65
SF3B1-209ENST00000479532 Q8N976 141 aa4.75□□□□□ -1.65
SF3B1-209ENST00000479532 FER1L6-AS1Q8NA97 138 aa4.75□□□□□ -1.65
SF3B1-209ENST00000479532 OR10G8Q8NGN5 311 aa4.75□□□□□ -1.65
SF3B1-209ENST00000479532 OR1N2Q8NGR9 330 aa4.75□□□□□ -1.65
SF3B1-209ENST00000479532 MRAP2Q96G30 205 aa4.75□□□□□ -1.65
SF3B1-209ENST00000479532 KLK9Q9UKQ9 250 aa4.75□□□□□ -1.65
SF3B1-209ENST00000479532 PAM16Q9Y3D7 125 aa4.75□□□□□ -1.65
SF3B1-209ENST00000479532 TRAPPC1Q9Y5R8 145 aa4.75□□□□□ -1.65
SF3B1-209ENST00000479532 LY96Q9Y6Y9 160 aa4.75□□□□□ -1.65
SF3B1-209ENST00000479532 TRAV9-2A0A087WT02 112 aa4.74□□□□□ -1.65
SF3B1-209ENST00000479532 IGHV3-21A0A0B4J1V1 117 aa4.74□□□□□ -1.65
SF3B1-209ENST00000479532 H3BP45 60 aa4.74□□□□□ -1.65
SF3B1-209ENST00000479532 SLC17A3O00476 420 aa4.74□□□□□ -1.65
SF3B1-209ENST00000479532 TAX1BP3O14907 124 aa4.74□□□□□ -1.65
SF3B1-209ENST00000479532 NUDT3O95989 172 aa4.74□□□□□ -1.65
SF3B1-209ENST00000479532 IGHV3-23P01764 117 aa4.74□□□□□ -1.65
SF3B1-209ENST00000479532 CLEC3BP05452 202 aa4.74□□□□□ -1.65
SF3B1-209ENST00000479532 GPX1P07203 203 aa4.74□□□□□ -1.65
SF3B1-209ENST00000479532 GPR183P32249 361 aa4.74□□□□□ -1.65
SF3B1-209ENST00000479532 RPL23P62829 140 aaKnown RBP4.74□□□□□ -1.65
SF3B1-209ENST00000479532 HBG1P69891 147 aa4.74□□□□□ -1.65
SF3B1-209ENST00000479532 HBG2P69892 147 aa4.74□□□□□ -1.65
SF3B1-209ENST00000479532 DEFB136Q30KP8 78 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms