RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 HLA-DMBP28068 263 aa19.04■□□□□ 0.64
SYNGAP1-206ENST00000479510 HIF1ANQ9NWT6 349 aa19.04■□□□□ 0.64
SYNGAP1-206ENST00000479510 SPTBN2O15020 2390 aa19.03■□□□□ 0.64
SYNGAP1-206ENST00000479510 TRBV7-1A0A0A6YYK4 115 aa19.03■□□□□ 0.64
SYNGAP1-206ENST00000479510 SFTPCP11686 197 aa19.03■□□□□ 0.64
SYNGAP1-206ENST00000479510 NHLH1Q02575 133 aa19.03■□□□□ 0.64
SYNGAP1-206ENST00000479510 ECSCRQ19T08 205 aa19.03■□□□□ 0.64
SYNGAP1-206ENST00000479510 EEF1AKMT3Q96AZ1 226 aa19.03■□□□□ 0.64
SYNGAP1-206ENST00000479510 K7EP13 123 aa19.02■□□□□ 0.64
SYNGAP1-206ENST00000479510 IGFL4Q6B9Z1 124 aa19.02■□□□□ 0.64
SYNGAP1-206ENST00000479510 C2orf91Q6ZV80 131 aa19.02■□□□□ 0.64
SYNGAP1-206ENST00000479510 IFI27L1Q96BM0 104 aa19.02■□□□□ 0.64
SYNGAP1-206ENST00000479510 RNF185Q96GF1 192 aa19.02■□□□□ 0.64
SYNGAP1-206ENST00000479510 MAP1LC3AQ9H492 121 aa19.02■□□□□ 0.64
SYNGAP1-206ENST00000479510 DMXL2Q8TDJ6 3036 aa19.02■□□□□ 0.64
SYNGAP1-206ENST00000479510 MUC21A0A0G2JKD1 596 aa19.02■□□□□ 0.63
SYNGAP1-206ENST00000479510 MUC21A0A140T8X8 626 aa19.02■□□□□ 0.63
SYNGAP1-206ENST00000479510 MUC21Q5SSG8 566 aa19.02■□□□□ 0.63
SYNGAP1-206ENST00000479510 CLPSL1A2RUU4 121 aa19.01■□□□□ 0.63
SYNGAP1-206ENST00000479510 SAA4P35542 130 aa19.01■□□□□ 0.63
SYNGAP1-206ENST00000479510 SEC11AP67812 179 aa19.01■□□□□ 0.63
SYNGAP1-206ENST00000479510 DCHS1Q96JQ0 3298 aa19.01■□□□□ 0.63
SYNGAP1-206ENST00000479510 FGF6P10767 208 aa19.01■□□□□ 0.63
SYNGAP1-206ENST00000479510 PIP4P2Q8N4L2 257 aa19.01■□□□□ 0.63
SYNGAP1-206ENST00000479510 CCDC140Q96MF4 163 aa19.01■□□□□ 0.63
SYNGAP1-206ENST00000479510 NXT2Q9NPJ8 142 aaKnown RBP19.01■□□□□ 0.63
SYNGAP1-206ENST00000479510 CENPVL3A0A0U1RRI6 287 aa19■□□□□ 0.63
SYNGAP1-206ENST00000479510 VAMP3Q15836 100 aa19■□□□□ 0.63
SYNGAP1-206ENST00000479510 METTL26Q96S19 204 aa18.99■□□□□ 0.63
SYNGAP1-206ENST00000479510 A0A1W2PPR1 153 aa18.99■□□□□ 0.63
SYNGAP1-206ENST00000479510 PRAC2D3DTV9 90 aa18.99■□□□□ 0.63
SYNGAP1-206ENST00000479510 SIVA1O15304 175 aa18.99■□□□□ 0.63
SYNGAP1-206ENST00000479510 LMO4P61968 165 aa18.98■□□□□ 0.63
SYNGAP1-206ENST00000479510 CACNG7P62955 275 aa18.98■□□□□ 0.63
SYNGAP1-206ENST00000479510 ERCC8Q13216 396 aa18.98■□□□□ 0.63
SYNGAP1-206ENST00000479510 BOD1L2Q8IYS8 172 aa18.98■□□□□ 0.63
SYNGAP1-206ENST00000479510 OR4C5Q8NGB2 326 aa18.98■□□□□ 0.63
SYNGAP1-206ENST00000479510 OR9G4Q8NGQ1 327 aa18.98■□□□□ 0.63
SYNGAP1-206ENST00000479510 U3KQE9 123 aa18.98■□□□□ 0.63
SYNGAP1-206ENST00000479510 IGHV3-35A0A0C4DH35 117 aa18.97■□□□□ 0.63
SYNGAP1-206ENST00000479510 ANKRD39Q53RE8 183 aa18.97■□□□□ 0.63
SYNGAP1-206ENST00000479510 PIFOQ8TCI5 191 aa18.97■□□□□ 0.63
SYNGAP1-206ENST00000479510 IGHV3OR16-8A0A075B7F1 116 aa18.97■□□□□ 0.63
SYNGAP1-206ENST00000479510 SMKR1H3BMG3 65 aa18.97■□□□□ 0.63
SYNGAP1-206ENST00000479510 NPFFO15130 113 aa18.97■□□□□ 0.63
SYNGAP1-206ENST00000479510 NDUFS7O75251 213 aa18.97■□□□□ 0.63
SYNGAP1-206ENST00000479510 TMEM97Q5BJF2 176 aa18.97■□□□□ 0.63
SYNGAP1-206ENST00000479510 PRSS57Q6UWY2 283 aa18.97■□□□□ 0.63
SYNGAP1-206ENST00000479510 CLEC19AQ6UXS0 136 aa18.97■□□□□ 0.63
SYNGAP1-206ENST00000479510 CEP295Q9C0D2 2601 aa18.96■□□□□ 0.63
SYNGAP1-206ENST00000479510 FCER1GP30273 86 aa18.96■□□□□ 0.63
SYNGAP1-206ENST00000479510 IL17RELQ6ZVW7 336 aa18.96■□□□□ 0.63
SYNGAP1-206ENST00000479510 AGPAT4-IT1Q9H0P7 198 aa18.96■□□□□ 0.63
SYNGAP1-206ENST00000479510 MSRB1Q9NZV6 116 aa18.96■□□□□ 0.63
SYNGAP1-206ENST00000479510 TMEM78Q5T7P6 136 aa18.95■□□□□ 0.62
SYNGAP1-206ENST00000479510 C9orf47Q6ZRZ4 202 aa18.95■□□□□ 0.62
SYNGAP1-206ENST00000479510 C5orf56Q8N8D9 126 aa18.95■□□□□ 0.62
SYNGAP1-206ENST00000479510 SPTA1P02549 2419 aa18.95■□□□□ 0.62
SYNGAP1-206ENST00000479510 TNFRSF6BO95407 300 aa18.94■□□□□ 0.62
SYNGAP1-206ENST00000479510 RNF182Q8N6D2 247 aa18.94■□□□□ 0.62
SYNGAP1-206ENST00000479510 UBTD1Q9HAC8 227 aa18.94■□□□□ 0.62
SYNGAP1-206ENST00000479510 TRAV8-2A0A0B4J237 113 aa18.94■□□□□ 0.62
SYNGAP1-206ENST00000479510 SMAD7O15105 426 aaKnown RBP18.94■□□□□ 0.62
SYNGAP1-206ENST00000479510 CRIP2P52943 208 aaPredicted RBP18.94■□□□□ 0.62
SYNGAP1-206ENST00000479510 ATP5G2Q06055 141 aa18.94■□□□□ 0.62
SYNGAP1-206ENST00000479510 G3V318 75 aa18.93■□□□□ 0.62
SYNGAP1-206ENST00000479510 PEF1Q9UBV8 284 aaKnown RBP18.93■□□□□ 0.62
SYNGAP1-206ENST00000479510 FAM223BA6NKX1 122 aa18.93■□□□□ 0.62
SYNGAP1-206ENST00000479510 FAM223AQ8IWN6 122 aa18.93■□□□□ 0.62
SYNGAP1-206ENST00000479510 OR4X2Q8NGF9 303 aa18.93■□□□□ 0.62
SYNGAP1-206ENST00000479510 IGKV3D-20A0A0C4DH25 116 aa18.92■□□□□ 0.62
SYNGAP1-206ENST00000479510 PRSS47A8MTI9 375 aa18.92■□□□□ 0.62
SYNGAP1-206ENST00000479510 C8orf86Q6ZUL3 223 aa18.92■□□□□ 0.62
SYNGAP1-206ENST00000479510 IGHV4-4A0A075B6R2 117 aa18.91■□□□□ 0.62
SYNGAP1-206ENST00000479510 SMIM15Q7Z3B0 74 aa18.91■□□□□ 0.62
SYNGAP1-206ENST00000479510 LENEPQ9Y5L5 61 aa18.91■□□□□ 0.62
SYNGAP1-206ENST00000479510 HSD52Q0P140 79 aa18.91■□□□□ 0.62
SYNGAP1-206ENST00000479510 C19orf54Q5BKX5 351 aa18.91■□□□□ 0.62
SYNGAP1-206ENST00000479510 Q8N8P6 123 aa18.91■□□□□ 0.62
SYNGAP1-206ENST00000479510 BPESC1Q9GZL8 116 aa18.91■□□□□ 0.62
SYNGAP1-206ENST00000479510 MOB4Q9Y3A3 225 aa18.91■□□□□ 0.62
SYNGAP1-206ENST00000479510 A1L4Q6 167 aa18.9■□□□□ 0.62
SYNGAP1-206ENST00000479510 LEPP41159 167 aa18.9■□□□□ 0.62
SYNGAP1-206ENST00000479510 ZMAT4Q9H898 229 aa18.9■□□□□ 0.62
SYNGAP1-206ENST00000479510 A6NDN8 102 aa18.89■□□□□ 0.62
SYNGAP1-206ENST00000479510 LINC01548A6NM66 108 aa18.89■□□□□ 0.61
SYNGAP1-206ENST00000479510 FXYD7P58549 80 aa18.89■□□□□ 0.61
SYNGAP1-206ENST00000479510 SMPXQ9UHP9 88 aa18.89■□□□□ 0.61
SYNGAP1-206ENST00000479510 IGHV3-66A0A0C4DH42 116 aa18.88■□□□□ 0.61
SYNGAP1-206ENST00000479510 CBY3A6NI87 242 aa18.88■□□□□ 0.61
SYNGAP1-206ENST00000479510 C11orf21Q9P2W6 132 aa18.88■□□□□ 0.61
SYNGAP1-206ENST00000479510 TRAV41A0A0B4J266 112 aa18.88■□□□□ 0.61
SYNGAP1-206ENST00000479510 C7orf71A4D174 169 aa18.88■□□□□ 0.61
SYNGAP1-206ENST00000479510 C9orf139Q6ZV77 190 aa18.88■□□□□ 0.61
SYNGAP1-206ENST00000479510 SNAI2O43623 268 aa18.87■□□□□ 0.61
SYNGAP1-206ENST00000479510 RNASE8Q8TDE3 154 aaKnown RBP18.87■□□□□ 0.61
SYNGAP1-206ENST00000479510 IGHV7-4-1A0A0J9YVY3 117 aa18.86■□□□□ 0.61
SYNGAP1-206ENST00000479510 AMMECR1LQ6DCA0 310 aa18.86■□□□□ 0.61
SYNGAP1-206ENST00000479510 IGLV2-18A0A075B6J9 118 aa18.86■□□□□ 0.61
SYNGAP1-206ENST00000479510 H3BRM9 83 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms