RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 PHLDA2Q53GA4 152 aa5.03□□□□□ -1.6
VCP-205ENST00000479300 C10orf55Q5SWW7 151 aa5.03□□□□□ -1.6
VCP-205ENST00000479300 CLEC19AQ6UXS0 136 aa5.03□□□□□ -1.6
VCP-205ENST00000479300 NIT1Q86X76 327 aa5.03□□□□□ -1.6
VCP-205ENST00000479300 OR51H1Q8NH63 302 aa5.03□□□□□ -1.6
VCP-205ENST00000479300 LINC00476Q8WZB0 136 aa5.03□□□□□ -1.6
VCP-205ENST00000479300 KCNS1Q96KK3 526 aa5.03□□□□□ -1.6
VCP-205ENST00000479300 FAM110AQ9BQ89 295 aa5.03□□□□□ -1.6
VCP-205ENST00000479300 SRSF8Q9BRL6 282 aaKnown RBP5.03□□□□□ -1.6
VCP-205ENST00000479300 HINT2Q9BX68 163 aa5.03□□□□□ -1.6
VCP-205ENST00000479300 TECRQ9NZ01 308 aaKnown RBP5.03□□□□□ -1.6
VCP-205ENST00000479300 SMPXQ9UHP9 88 aa5.03□□□□□ -1.6
VCP-205ENST00000479300 U3KQE9 123 aa5.03□□□□□ -1.6
VCP-205ENST00000479300 TEX22C9J3V5 150 aa5.02□□□□□ -1.61
VCP-205ENST00000479300 CORTO00230 105 aa5.02□□□□□ -1.61
VCP-205ENST00000479300 BMPR1BO00238 502 aa5.02□□□□□ -1.61
VCP-205ENST00000479300 UPK2O00526 184 aa5.02□□□□□ -1.61
VCP-205ENST00000479300 S1PR2O95136 353 aa5.02□□□□□ -1.61
VCP-205ENST00000479300 TMEM50AO95807 157 aa5.02□□□□□ -1.61
VCP-205ENST00000479300 TRBV12-3P01733 135 aa5.02□□□□□ -1.61
VCP-205ENST00000479300 IGHV3-23P01764 117 aa5.02□□□□□ -1.61
VCP-205ENST00000479300 CRYGCP07315 174 aa5.02□□□□□ -1.61
VCP-205ENST00000479300 HINT1P49773 126 aaPredicted RBP5.02□□□□□ -1.61
VCP-205ENST00000479300 KRTDAPP60985 99 aa5.02□□□□□ -1.61
VCP-205ENST00000479300 MRGPRG-AS1Q2M3A8 158 aa5.02□□□□□ -1.61
VCP-205ENST00000479300 TM4SF20Q53R12 229 aa5.02□□□□□ -1.61
VCP-205ENST00000479300 WDR73Q6P4I2 378 aa5.02□□□□□ -1.61
VCP-205ENST00000479300 CFAP161Q6P656 301 aa5.02□□□□□ -1.61
VCP-205ENST00000479300 LINC00322Q6ZN03 302 aaPredicted RBP5.02□□□□□ -1.61
VCP-205ENST00000479300 ZNF818PQ6ZRF7 136 aa5.02□□□□□ -1.61
VCP-205ENST00000479300 BAGE3Q86Y29 109 aa5.02□□□□□ -1.61
VCP-205ENST00000479300 BAGE2Q86Y30 109 aa5.02□□□□□ -1.61
VCP-205ENST00000479300 OR1L8Q8NGR8 309 aa5.02□□□□□ -1.61
VCP-205ENST00000479300 IL17DQ8TAD2 202 aa5.02□□□□□ -1.61
VCP-205ENST00000479300 UHRF2Q96PU4 802 aa5.02□□□□□ -1.61
VCP-205ENST00000479300 WDR61Q9GZS3 305 aaKnown RBP5.02□□□□□ -1.61
VCP-205ENST00000479300 NRN1Q9NPD7 142 aa5.02□□□□□ -1.61
VCP-205ENST00000479300 UFC1Q9Y3C8 167 aa5.02□□□□□ -1.61
VCP-205ENST00000479300 TRAV9-2A0A087WT02 112 aa5.01□□□□□ -1.61
VCP-205ENST00000479300 A0A1B0GV72 72 aa5.01□□□□□ -1.61
VCP-205ENST00000479300 C2orf70A6NJV1 201 aa5.01□□□□□ -1.61
VCP-205ENST00000479300 LGALS9O00182 355 aa5.01□□□□□ -1.61
VCP-205ENST00000479300 TAX1BP3O14907 124 aa5.01□□□□□ -1.61
VCP-205ENST00000479300 IGLV2-14P01704 120 aa5.01□□□□□ -1.61
VCP-205ENST00000479300 PSG1P11464 419 aa5.01□□□□□ -1.61
VCP-205ENST00000479300 AREGP15514 252 aa5.01□□□□□ -1.61
VCP-205ENST00000479300 F2RP25116 425 aa5.01□□□□□ -1.61
VCP-205ENST00000479300 EIF4EBP1Q13541 118 aaPredicted RBP5.01□□□□□ -1.61
VCP-205ENST00000479300 CD300EQ496F6 205 aaPredicted RBP5.01□□□□□ -1.61
VCP-205ENST00000479300 FFAR4Q5NUL3 377 aa5.01□□□□□ -1.61
VCP-205ENST00000479300 RBPMS2Q6ZRY4 209 aaKnown RBP5.01□□□□□ -1.61
VCP-205ENST00000479300 GPHB5Q86YW7 130 aa5.01□□□□□ -1.61
VCP-205ENST00000479300 DEFB125Q8N687 156 aa5.01□□□□□ -1.61
VCP-205ENST00000479300 SFRP2Q96HF1 295 aa5.01□□□□□ -1.61
VCP-205ENST00000479300 GPHA2Q96T91 129 aa5.01□□□□□ -1.61
VCP-205ENST00000479300 RSG1Q9BU20 258 aa5.01□□□□□ -1.61
VCP-205ENST00000479300 QTRT1Q9BXR0 403 aaKnown RBP5.01□□□□□ -1.61
VCP-205ENST00000479300 GNB1LQ9BYB4 327 aa5.01□□□□□ -1.61
VCP-205ENST00000479300 VSIRQ9H7M9 311 aa5.01□□□□□ -1.61
VCP-205ENST00000479300 PLEKHA3Q9HB20 300 aa5.01□□□□□ -1.61
VCP-205ENST00000479300 KCNIP2Q9NS61 270 aa5.01□□□□□ -1.61
VCP-205ENST00000479300 TMEM140Q9NV12 185 aa5.01□□□□□ -1.61
VCP-205ENST00000479300 IL36BQ9NZH7 164 aa5.01□□□□□ -1.61
VCP-205ENST00000479300 PRNDQ9UKY0 176 aa5.01□□□□□ -1.61
VCP-205ENST00000479300 OR51B2Q9Y5P1 312 aa5.01□□□□□ -1.61
VCP-205ENST00000479300 LY96Q9Y6Y9 160 aa5.01□□□□□ -1.61
VCP-205ENST00000479300 S4R3C0 116 aa5.01□□□□□ -1.61
VCP-205ENST00000479300 IGLV11-55A0A075B6I3 123 aa5□□□□□ -1.61
VCP-205ENST00000479300 GRIFINA4D1Z8 144 aa5□□□□□ -1.61
VCP-205ENST00000479300 IZUMO1RA6ND01 250 aa5□□□□□ -1.61
VCP-205ENST00000479300 OR11H12B2RN74 326 aa5□□□□□ -1.61
VCP-205ENST00000479300 FAM90A26D6RGX4 464 aa5□□□□□ -1.61
VCP-205ENST00000479300 ZNF324O75467 553 aaPredicted RBP5□□□□□ -1.61
VCP-205ENST00000479300 RBMXL2O75526 392 aaKnown RBP5□□□□□ -1.61
VCP-205ENST00000479300 PGLYRP1O75594 196 aaPredicted RBP5□□□□□ -1.61
VCP-205ENST00000479300 CLEC3BP05452 202 aa5□□□□□ -1.61
VCP-205ENST00000479300 C3orf79P0CE67 100 aa5□□□□□ -1.61
VCP-205ENST00000479300 SMIM17P0DL12 118 aa5□□□□□ -1.61
VCP-205ENST00000479300 MYOD1P15172 320 aa5□□□□□ -1.61
VCP-205ENST00000479300 CBLN1P23435 193 aa5□□□□□ -1.61
VCP-205ENST00000479300 GPR183P32249 361 aa5□□□□□ -1.61
VCP-205ENST00000479300 AMTP48728 403 aa5□□□□□ -1.61
VCP-205ENST00000479300 POU2AF1Q16633 256 aa5□□□□□ -1.61
VCP-205ENST00000479300 DEFB114Q30KQ6 69 aa5□□□□□ -1.61
VCP-205ENST00000479300 H2BFWTQ7Z2G1 175 aa5□□□□□ -1.61
VCP-205ENST00000479300 TBC1D26Q86UD7 250 aa5□□□□□ -1.61
VCP-205ENST00000479300 RPP25LQ8N5L8 163 aaKnown RBP5□□□□□ -1.61
VCP-205ENST00000479300 OR10P1Q8NGE3 313 aa5□□□□□ -1.61
VCP-205ENST00000479300 OR10G8Q8NGN5 311 aa5□□□□□ -1.61
VCP-205ENST00000479300 OR4A16Q8NH70 328 aa5□□□□□ -1.61
VCP-205ENST00000479300 LSM10Q969L4 123 aaKnown RBP5□□□□□ -1.61
VCP-205ENST00000479300 ST20Q9HBF5 79 aa5□□□□□ -1.61
VCP-205ENST00000479300 TRAV3A0A0B4J244 114 aa4.99□□□□□ -1.61
VCP-205ENST00000479300 TRAV25A0A0B4J276 109 aa4.99□□□□□ -1.61
VCP-205ENST00000479300 TEX50A0A1B0GTY4 177 aa4.99□□□□□ -1.61
VCP-205ENST00000479300 C11orf94C9JXX5 98 aa4.99□□□□□ -1.61
VCP-205ENST00000479300 SYNGR2O43760 224 aa4.99□□□□□ -1.61
VCP-205ENST00000479300 OR7C2O60412 319 aa4.99□□□□□ -1.61
VCP-205ENST00000479300 SERPINE2P07093 398 aa4.99□□□□□ -1.61
VCP-205ENST00000479300 IGLC1P0CG04 106 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms