RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 ERCC8Q13216 396 aa14.77□□□□□ -0.05
VARS-224ENST00000479051 HYLS1Q96M11 299 aa14.77□□□□□ -0.05
VARS-224ENST00000479051 AGPAT4-IT1Q9H0P7 198 aa14.77□□□□□ -0.05
VARS-224ENST00000479051 LOC102723971A0A1B0GUV8 181 aa14.76□□□□□ -0.05
VARS-224ENST00000479051 RBAKDNA6NC62 111 aa14.76□□□□□ -0.05
VARS-224ENST00000479051 SLC25A5P05141 298 aaKnown RBP14.76□□□□□ -0.05
VARS-224ENST00000479051 TPT1P13693 172 aaKnown RBP14.76□□□□□ -0.05
VARS-224ENST00000479051 ARL6IP6Q8N6S5 226 aa14.76□□□□□ -0.05
VARS-224ENST00000479051 TEX48A0A1B0GUV7 120 aa14.75□□□□□ -0.05
VARS-224ENST00000479051 UMAD1C9J7I0 102 aa14.75□□□□□ -0.05
VARS-224ENST00000479051 H7BYZ3 331 aa14.75□□□□□ -0.05
VARS-224ENST00000479051 EMP1P54849 157 aa14.75□□□□□ -0.05
VARS-224ENST00000479051 NANOS2P60321 138 aaKnown RBP14.75□□□□□ -0.05
VARS-224ENST00000479051 GFI1BQ5VTD9 330 aa14.75□□□□□ -0.05
VARS-224ENST00000479051 SUN5Q8TC36 379 aa14.75□□□□□ -0.05
VARS-224ENST00000479051 DIRC3C9JPN6 131 aa14.74□□□□□ -0.05
VARS-224ENST00000479051 J3KRW8 73 aa14.74□□□□□ -0.05
VARS-224ENST00000479051 NMBP08949 121 aa14.74□□□□□ -0.05
VARS-224ENST00000479051 SPART-AS1P0CW21 52 aa14.74□□□□□ -0.05
VARS-224ENST00000479051 ZNF138P52744 262 aa14.74□□□□□ -0.05
VARS-224ENST00000479051 TAS2R60P59551 318 aa14.74□□□□□ -0.05
VARS-224ENST00000479051 STOML3Q8TAV4 291 aa14.74□□□□□ -0.05
VARS-224ENST00000479051 VGLL1Q99990 258 aa14.74□□□□□ -0.05
VARS-224ENST00000479051 NIPSNAP3BQ9BS92 247 aa14.74□□□□□ -0.05
VARS-224ENST00000479051 ZNF492Q9P255 531 aa14.74□□□□□ -0.05
VARS-224ENST00000479051 RPH3ALQ9UNE2 315 aa14.74□□□□□ -0.05
VARS-224ENST00000479051 KLK5Q9Y337 293 aaPredicted RBP14.74□□□□□ -0.05
VARS-224ENST00000479051 TRBV7-9A0A0J9YWB2 115 aa14.73□□□□□ -0.05
VARS-224ENST00000479051 ZNF705GA8MUZ8 300 aaPredicted RBP14.73□□□□□ -0.05
VARS-224ENST00000479051 ZNF726P1Q15940 193 aa14.73□□□□□ -0.05
VARS-224ENST00000479051 EIF5AL1Q6IS14 154 aaKnown RBP14.73□□□□□ -0.05
VARS-224ENST00000479051 SSX7Q7RTT5 188 aa14.73□□□□□ -0.05
VARS-224ENST00000479051 PHLDA1Q8WV24 401 aaPredicted RBP14.73□□□□□ -0.05
VARS-224ENST00000479051 C7orf71A4D174 169 aa14.72□□□□□ -0.05
VARS-224ENST00000479051 MAP1LC3B2A6NCE7 125 aa14.72□□□□□ -0.05
VARS-224ENST00000479051 GPX1P07203 203 aa14.72□□□□□ -0.05
VARS-224ENST00000479051 HTN1P15515 57 aa14.72□□□□□ -0.05
VARS-224ENST00000479051 CRISP2P16562 243 aa14.72□□□□□ -0.05
VARS-224ENST00000479051 LGALSLQ3ZCW2 172 aaPredicted RBP14.72□□□□□ -0.05
VARS-224ENST00000479051 CEMP1Q6PRD7 247 aaPredicted RBP14.72□□□□□ -0.05
VARS-224ENST00000479051 C5orf17Q8NAS9 161 aa14.72□□□□□ -0.05
VARS-224ENST00000479051 FAM19A4Q96LR4 140 aa14.72□□□□□ -0.05
VARS-224ENST00000479051 MAP1LC3BQ9GZQ8 125 aa14.72□□□□□ -0.05
VARS-224ENST00000479051 TRAV12-3A0A0B4J271 114 aa14.71□□□□□ -0.05
VARS-224ENST00000479051 SERTM2A0A1B0GWG4 89 aa14.71□□□□□ -0.05
VARS-224ENST00000479051 KLLNB2CW77 178 aa14.71□□□□□ -0.05
VARS-224ENST00000479051 C11orf94C9JXX5 98 aa14.71□□□□□ -0.05
VARS-224ENST00000479051 K7EQM0 130 aa14.71□□□□□ -0.05
VARS-224ENST00000479051 KIR3DS1Q14943 382 aa14.71□□□□□ -0.05
VARS-224ENST00000479051 DPPA3Q6W0C5 159 aa14.71□□□□□ -0.05
VARS-224ENST00000479051 CCDC28AQ8IWP9 274 aa14.71□□□□□ -0.05
VARS-224ENST00000479051 C16orf74Q96GX8 76 aa14.71□□□□□ -0.05
VARS-224ENST00000479051 YTHDF2Q9Y5A9 579 aaKnown RBP14.71□□□□□ -0.05
VARS-224ENST00000479051 LENEPQ9Y5L5 61 aa14.71□□□□□ -0.05
VARS-224ENST00000479051 A0A1W2PRE2 83 aa14.7□□□□□ -0.06
VARS-224ENST00000479051 FGF8P55075 233 aaPredicted RBP14.7□□□□□ -0.06
VARS-224ENST00000479051 ZNF493Q6ZR52 646 aa14.7□□□□□ -0.06
VARS-224ENST00000479051 GOLT1AQ6ZVE7 132 aa14.7□□□□□ -0.06
VARS-224ENST00000479051 Q8TAT8 98 aa14.7□□□□□ -0.06
VARS-224ENST00000479051 TMED6Q8WW62 240 aa14.7□□□□□ -0.06
VARS-224ENST00000479051 PYGO2Q9BRQ0 406 aa14.7□□□□□ -0.06
VARS-224ENST00000479051 CELA1Q9UNI1 258 aa14.7□□□□□ -0.06
VARS-224ENST00000479051 RNASE4P34096 147 aaKnown RBP14.69□□□□□ -0.06
VARS-224ENST00000479051 SUMO1P63165 101 aaKnown RBP14.69□□□□□ -0.06
VARS-224ENST00000479051 ZFP69Q49AA0 526 aa14.69□□□□□ -0.06
VARS-224ENST00000479051 FAM213BQ8TBF2 198 aa14.69□□□□□ -0.06
VARS-224ENST00000479051 NKX6-2Q9C056 277 aaPredicted RBP14.69□□□□□ -0.06
VARS-224ENST00000479051 DKK2Q9UBU2 259 aa14.69□□□□□ -0.06
VARS-224ENST00000479051 GNG5P63218 68 aa14.68□□□□□ -0.06
VARS-224ENST00000479051 BTN1A1Q13410 526 aa14.68□□□□□ -0.06
VARS-224ENST00000479051 FAM222AQ5U5X8 452 aa14.68□□□□□ -0.06
VARS-224ENST00000479051 TMEM263Q8WUH6 116 aaKnown RBP14.68□□□□□ -0.06
VARS-224ENST00000479051 TRAV10A0A0B4J240 114 aa14.67□□□□□ -0.06
VARS-224ENST00000479051 FHITP49789 147 aa14.67□□□□□ -0.06
VARS-224ENST00000479051 CD300CQ08708 224 aa14.67□□□□□ -0.06
VARS-224ENST00000479051 C12orf74Q32Q52 190 aa14.67□□□□□ -0.06
VARS-224ENST00000479051 Q6ZTC4 211 aa14.67□□□□□ -0.06
VARS-224ENST00000479051 SLC51BQ86UW2 128 aa14.67□□□□□ -0.06
VARS-224ENST00000479051 ZFAND2AQ8N6M9 145 aa14.67□□□□□ -0.06
VARS-224ENST00000479051 TMPRSS5Q9H3S3 457 aa14.67□□□□□ -0.06
VARS-224ENST00000479051 LYRM9A8MSI8 78 aa14.66□□□□□ -0.06
VARS-224ENST00000479051 GGTLC3B5MD39 225 aa14.66□□□□□ -0.06
VARS-224ENST00000479051 TCRAP04437 139 aa14.66□□□□□ -0.06
VARS-224ENST00000479051 PRM2P04554 102 aa14.66□□□□□ -0.06
VARS-224ENST00000479051 AZU1P20160 251 aa14.66□□□□□ -0.06
VARS-224ENST00000479051 RAB5CP51148 216 aa14.66□□□□□ -0.06
VARS-224ENST00000479051 UBE2G2P60604 165 aa14.66□□□□□ -0.06
VARS-224ENST00000479051 SFT2D1Q8WV19 159 aa14.66□□□□□ -0.06
VARS-224ENST00000479051 NDFIP1Q9BT67 221 aa14.66□□□□□ -0.06
VARS-224ENST00000479051 A0A1B0GVG6 124 aa14.65□□□□□ -0.06
VARS-224ENST00000479051 FBLL1A6NHQ2 334 aaKnown RBP14.65□□□□□ -0.06
VARS-224ENST00000479051 IFNA7P01567 189 aa14.65□□□□□ -0.06
VARS-224ENST00000479051 ZNF767PQ75MW2 155 aa14.65□□□□□ -0.06
VARS-224ENST00000479051 CYB561D1Q8N8Q1 229 aa14.65□□□□□ -0.06
VARS-224ENST00000479051 C2CD4CQ8TF44 421 aa14.65□□□□□ -0.06
VARS-224ENST00000479051 MBD3L1Q8WWY6 194 aa14.65□□□□□ -0.06
VARS-224ENST00000479051 ATG101Q9BSB4 218 aa14.65□□□□□ -0.06
VARS-224ENST00000479051 EPDR1Q9UM22 224 aa14.65□□□□□ -0.06
VARS-224ENST00000479051 RGS13O14921 159 aa14.64□□□□□ -0.07
VARS-224ENST00000479051 ZNF324O75467 553 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms