RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, humanhuman

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-204ENST00000478776 TMEM138Q9NPI0 162 aa1.12□□□□□ -2.23
VLDLR-204ENST00000478776 HSPB8Q9UJY1 196 aa1.12□□□□□ -2.23
VLDLR-204ENST00000478776 MYOFQ9NZM1 2061 aa1.12□□□□□ -2.23
VLDLR-204ENST00000478776 TNRC6BQ9UPQ9 1833 aaKnown RBP1.12□□□□□ -2.23
VLDLR-204ENST00000478776 HELZ2Q9BYK8 2649 aaKnown RBP1.12□□□□□ -2.23
VLDLR-204ENST00000478776 USP54Q70EL1 1684 aa1.11□□□□□ -2.23
VLDLR-204ENST00000478776 KIAA1549Q9HCM3 1950 aa1.11□□□□□ -2.23
VLDLR-204ENST00000478776 LOC107986453A0A1B0GWG9 222 aa1.11□□□□□ -2.23
VLDLR-204ENST00000478776 TRBV6-4A0A1B0GX49 114 aa1.11□□□□□ -2.23
VLDLR-204ENST00000478776 INE1O15225 51 aa1.11□□□□□ -2.23
VLDLR-204ENST00000478776 HBDP02042 147 aa1.11□□□□□ -2.23
VLDLR-204ENST00000478776 MT-ND4LP03901 98 aa1.11□□□□□ -2.23
VLDLR-204ENST00000478776 COX7CP15954 63 aa1.11□□□□□ -2.23
VLDLR-204ENST00000478776 QRFPP83859 136 aa1.11□□□□□ -2.23
VLDLR-204ENST00000478776 DIAPH2-AS1Q14236 149 aa1.11□□□□□ -2.23
VLDLR-204ENST00000478776 MPV17LQ2QL34 196 aa1.11□□□□□ -2.23
VLDLR-204ENST00000478776 SMIM21Q3B7S5 101 aa1.11□□□□□ -2.23
VLDLR-204ENST00000478776 GLIPR1L1Q6UWM5 242 aa1.11□□□□□ -2.23
VLDLR-204ENST00000478776 TEN1Q86WV5 123 aa1.11□□□□□ -2.23
VLDLR-204ENST00000478776 DEFB119Q8N690 84 aa1.11□□□□□ -2.23
VLDLR-204ENST00000478776 OR4S1Q8NGB4 309 aa1.11□□□□□ -2.23
VLDLR-204ENST00000478776 OR10AG1Q8NH19 301 aa1.11□□□□□ -2.23
VLDLR-204ENST00000478776 CDC42SE1Q9NRR8 79 aa1.11□□□□□ -2.23
VLDLR-204ENST00000478776 CECR2Q9BXF3 1484 aa1.11□□□□□ -2.23
VLDLR-204ENST00000478776 CPDO75976 1380 aa1.1□□□□□ -2.23
VLDLR-204ENST00000478776 OVOS2A0A0J9YW53 1432 aa1.1□□□□□ -2.23
VLDLR-204ENST00000478776 OVOS2Q6IE36 1432 aa1.1□□□□□ -2.23
VLDLR-204ENST00000478776 DIDO1Q9BTC0 2240 aaKnown RBP1.1□□□□□ -2.23
VLDLR-204ENST00000478776 IGKV3-7A0A075B6H7 116 aa1.1□□□□□ -2.23
VLDLR-204ENST00000478776 IGKV2-40A0A087WW87 121 aaPredicted RBP1.1□□□□□ -2.23
VLDLR-204ENST00000478776 F8W1H4 67 aa1.1□□□□□ -2.23
VLDLR-204ENST00000478776 NUPR1O60356 82 aa1.1□□□□□ -2.23
VLDLR-204ENST00000478776 IGKV2D-40P01614 121 aaPredicted RBP1.1□□□□□ -2.23
VLDLR-204ENST00000478776 TCRAP04437 139 aa1.1□□□□□ -2.23
VLDLR-204ENST00000478776 SLC25A5P05141 298 aaKnown RBP1.1□□□□□ -2.23
VLDLR-204ENST00000478776 MPC1LP0DKB6 136 aa1.1□□□□□ -2.23
VLDLR-204ENST00000478776 IL9P15248 144 aa1.1□□□□□ -2.23
VLDLR-204ENST00000478776 ASB16-AS1Q495Z4 193 aa1.1□□□□□ -2.23
VLDLR-204ENST00000478776 HSD17B12Q53GQ0 312 aa1.1□□□□□ -2.23
VLDLR-204ENST00000478776 TMEM244Q5VVB8 128 aa1.1□□□□□ -2.23
VLDLR-204ENST00000478776 FOXI2Q6ZQN5 318 aa1.1□□□□□ -2.23
VLDLR-204ENST00000478776 GKN2Q86XP6 184 aa1.1□□□□□ -2.23
VLDLR-204ENST00000478776 AP1S3Q96PC3 154 aa1.1□□□□□ -2.23
VLDLR-204ENST00000478776 NABP2Q9BQ15 211 aa1.1□□□□□ -2.23
VLDLR-204ENST00000478776 FKBP11Q9NYL4 201 aa1.1□□□□□ -2.23
VLDLR-204ENST00000478776 CALML5Q9NZT1 146 aa1.1□□□□□ -2.23
VLDLR-204ENST00000478776 COPZ2Q9P299 210 aa1.1□□□□□ -2.23
VLDLR-204ENST00000478776 ZFC3H1O60293 1989 aaKnown RBP1.1□□□□□ -2.23
VLDLR-204ENST00000478776 EXPH5Q8NEV8 1989 aa1.1□□□□□ -2.23
VLDLR-204ENST00000478776 TANC2Q9HCD6 1990 aa1.1□□□□□ -2.23
VLDLR-204ENST00000478776 POLEQ07864 2286 aa1.09□□□□□ -2.23
VLDLR-204ENST00000478776 INTS1Q8N201 2190 aaKnown RBP1.09□□□□□ -2.23
VLDLR-204ENST00000478776 MED13Q9UHV7 2174 aa1.09□□□□□ -2.23
VLDLR-204ENST00000478776 PRB1P04280 392 aa1.09□□□□□ -2.23
VLDLR-204ENST00000478776 SLC25A4P12235 298 aa1.09□□□□□ -2.23
VLDLR-204ENST00000478776 EVI2AP22794 236 aa1.09□□□□□ -2.23
VLDLR-204ENST00000478776 ETV6P41212 452 aa1.09□□□□□ -2.23
VLDLR-204ENST00000478776 BLCAPP62952 87 aa1.09□□□□□ -2.23
VLDLR-204ENST00000478776 MIR22HGQ0VDD5 57 aa1.09□□□□□ -2.23
VLDLR-204ENST00000478776 CASC2Q6XLA1 102 aa1.09□□□□□ -2.23
VLDLR-204ENST00000478776 FAM19A2Q8N3H0 131 aa1.09□□□□□ -2.23
VLDLR-204ENST00000478776 TCEAL4Q96EI5 215 aa1.09□□□□□ -2.23
VLDLR-204ENST00000478776 COL1A1P02452 1464 aaPredicted RBP1.09□□□□□ -2.24
VLDLR-204ENST00000478776 ALPK3Q96L96 1907 aa1.09□□□□□ -2.24
VLDLR-204ENST00000478776 FREM3P0C091 2139 aa1.09□□□□□ -2.24
VLDLR-204ENST00000478776 KDM5CP41229 1560 aa1.08□□□□□ -2.24
VLDLR-204ENST00000478776 FANCMQ8IYD8 2048 aa1.08□□□□□ -2.24
VLDLR-204ENST00000478776 SIP14410 1827 aa1.08□□□□□ -2.24
VLDLR-204ENST00000478776 A0A096LPI6 279 aa1.08□□□□□ -2.24
VLDLR-204ENST00000478776 IGKV2-29A2NJV5 120 aaPredicted RBP1.08□□□□□ -2.24
VLDLR-204ENST00000478776 ZNF727A8MUV8 499 aa1.08□□□□□ -2.24
VLDLR-204ENST00000478776 H3BRM9 83 aa1.08□□□□□ -2.24
VLDLR-204ENST00000478776 GEMIN2O14893 280 aaKnown RBP1.08□□□□□ -2.24
VLDLR-204ENST00000478776 SMIM24O75264 130 aa1.08□□□□□ -2.24
VLDLR-204ENST00000478776 IGHV3-33P01772 117 aa1.08□□□□□ -2.24
VLDLR-204ENST00000478776 HIST1H1BP16401 226 aaKnown RBP1.08□□□□□ -2.24
VLDLR-204ENST00000478776 HIST1H1AQ02539 215 aaPredicted RBP1.08□□□□□ -2.24
VLDLR-204ENST00000478776 KRTAP21-3Q3LHN1 58 aa1.08□□□□□ -2.24
VLDLR-204ENST00000478776 CCSMST1Q4G0I0 132 aa1.08□□□□□ -2.24
VLDLR-204ENST00000478776 TMEM91Q6ZNR0 172 aa1.08□□□□□ -2.24
VLDLR-204ENST00000478776 ZCCHC23Q6ZST2 131 aa1.08□□□□□ -2.24
VLDLR-204ENST00000478776 LINC00526Q96FQ7 95 aa1.08□□□□□ -2.24
VLDLR-204ENST00000478776 CIB3Q96Q77 187 aaPredicted RBP1.08□□□□□ -2.24
VLDLR-204ENST00000478776 BANF2Q9H503 90 aa1.08□□□□□ -2.24
VLDLR-204ENST00000478776 PAIP2BQ9ULR5 123 aaKnown RBP1.08□□□□□ -2.24
VLDLR-204ENST00000478776 MPC1Q9Y5U8 109 aa1.08□□□□□ -2.24
VLDLR-204ENST00000478776 PTPRFP10586 1907 aa1.08□□□□□ -2.24
VLDLR-204ENST00000478776 MCM3APO60318 1980 aa1.08□□□□□ -2.24
VLDLR-204ENST00000478776 WDR97A6NE52 1622 aa1.07□□□□□ -2.24
VLDLR-204ENST00000478776 ARFGEF3Q5TH69 2177 aa1.07□□□□□ -2.24
VLDLR-204ENST00000478776 TRBV6-7A0A0A0MS04 114 aa1.07□□□□□ -2.24
VLDLR-204ENST00000478776 C3orf85A0A1B0GTC6 90 aa1.07□□□□□ -2.24
VLDLR-204ENST00000478776 PNMA8CA0A1B0GUJ8 204 aa1.07□□□□□ -2.24
VLDLR-204ENST00000478776 CCL25O15444 150 aa1.07□□□□□ -2.24
VLDLR-204ENST00000478776 TSPAN19P0C672 248 aa1.07□□□□□ -2.24
VLDLR-204ENST00000478776 COX4I1P13073 169 aa1.07□□□□□ -2.24
VLDLR-204ENST00000478776 HLA-DRB4P13762 266 aa1.07□□□□□ -2.24
VLDLR-204ENST00000478776 AKR1D1P51857 326 aa1.07□□□□□ -2.24
VLDLR-204ENST00000478776 GDF5OSQ5U4N7 250 aa1.07□□□□□ -2.24
VLDLR-204ENST00000478776 IZUMO2Q6UXV1 221 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms