RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 TEX48A0A1B0GUV7 120 aa11.11□□□□□ -0.63
HMGA1-206ENST00000478214 H7BYZ3 331 aa11.11□□□□□ -0.63
HMGA1-206ENST00000478214 LY6G6CO95867 125 aa11.11□□□□□ -0.63
HMGA1-206ENST00000478214 CDC34P49427 236 aaPredicted RBP11.11□□□□□ -0.63
HMGA1-206ENST00000478214 PQLC2Q6ZP29 291 aa11.11□□□□□ -0.63
HMGA1-206ENST00000478214 C9orf47Q6ZRZ4 202 aa11.11□□□□□ -0.63
HMGA1-206ENST00000478214 FAM19A4Q96LR4 140 aa11.11□□□□□ -0.63
HMGA1-206ENST00000478214 C20orf144Q9BQM9 153 aa11.11□□□□□ -0.63
HMGA1-206ENST00000478214 NIPSNAP3BQ9BS92 247 aa11.11□□□□□ -0.63
HMGA1-206ENST00000478214 TRAV12-3A0A0B4J271 114 aa11.1□□□□□ -0.63
HMGA1-206ENST00000478214 PLAC8L1A1L4L8 177 aa11.1□□□□□ -0.63
HMGA1-206ENST00000478214 CSN1S1P47710 185 aa11.1□□□□□ -0.63
HMGA1-206ENST00000478214 SERF2P84101 59 aa11.1□□□□□ -0.63
HMGA1-206ENST00000478214 TMEM78Q5T7P6 136 aa11.1□□□□□ -0.63
HMGA1-206ENST00000478214 RAB24Q969Q5 203 aa11.1□□□□□ -0.63
HMGA1-206ENST00000478214 GNPNAT1Q96EK6 184 aaPredicted RBP11.1□□□□□ -0.63
HMGA1-206ENST00000478214 VPS13DQ5THJ4 4388 aa11.09□□□□□ -0.63
HMGA1-206ENST00000478214 KMT2AQ03164 3969 aa11.09□□□□□ -0.63
HMGA1-206ENST00000478214 MBP02144 154 aa11.09□□□□□ -0.63
HMGA1-206ENST00000478214 SLC25A5P05141 298 aaKnown RBP11.09□□□□□ -0.63
HMGA1-206ENST00000478214 STAG3L2P0CL84 134 aa11.09□□□□□ -0.63
HMGA1-206ENST00000478214 STAG3L3P0CL85 134 aa11.09□□□□□ -0.63
HMGA1-206ENST00000478214 ARL14EPLP0DKL9 152 aa11.09□□□□□ -0.63
HMGA1-206ENST00000478214 HYLS1Q96M11 299 aa11.09□□□□□ -0.63
HMGA1-206ENST00000478214 APLNQ9ULZ1 77 aa11.09□□□□□ -0.63
HMGA1-206ENST00000478214 IGHV4-4A0A075B6R2 117 aa11.08□□□□□ -0.64
HMGA1-206ENST00000478214 PGPA6NDG6 321 aa11.08□□□□□ -0.64
HMGA1-206ENST00000478214 KLLNB2CW77 178 aa11.08□□□□□ -0.64
HMGA1-206ENST00000478214 ZNF138P52744 262 aa11.08□□□□□ -0.64
HMGA1-206ENST00000478214 TCTAP57738 103 aa11.08□□□□□ -0.64
HMGA1-206ENST00000478214 DAD1P61803 113 aa11.08□□□□□ -0.64
HMGA1-206ENST00000478214 CD300CQ08708 224 aa11.08□□□□□ -0.64
HMGA1-206ENST00000478214 BTN1A1Q13410 526 aa11.08□□□□□ -0.64
HMGA1-206ENST00000478214 OR11H4Q8NGC9 324 aa11.08□□□□□ -0.64
HMGA1-206ENST00000478214 Q8TAT8 98 aa11.08□□□□□ -0.64
HMGA1-206ENST00000478214 RNASE8Q8TDE3 154 aaKnown RBP11.08□□□□□ -0.64
HMGA1-206ENST00000478214 C16orf74Q96GX8 76 aa11.08□□□□□ -0.64
HMGA1-206ENST00000478214 OTORQ9NRC9 128 aa11.08□□□□□ -0.64
HMGA1-206ENST00000478214 CYTL1Q9NRR1 136 aa11.08□□□□□ -0.64
HMGA1-206ENST00000478214 ZNF492Q9P255 531 aa11.08□□□□□ -0.64
HMGA1-206ENST00000478214 C7orf71A4D174 169 aa11.07□□□□□ -0.64
HMGA1-206ENST00000478214 RBAKDNA6NC62 111 aa11.07□□□□□ -0.64
HMGA1-206ENST00000478214 LYRM9A8MSI8 78 aa11.07□□□□□ -0.64
HMGA1-206ENST00000478214 DIRC3C9JPN6 131 aa11.07□□□□□ -0.64
HMGA1-206ENST00000478214 TAAR5O14804 337 aa11.07□□□□□ -0.64
HMGA1-206ENST00000478214 HTN3P15516 51 aa11.07□□□□□ -0.64
HMGA1-206ENST00000478214 CRISP2P16562 243 aa11.07□□□□□ -0.64
HMGA1-206ENST00000478214 RNASE4P34096 147 aaKnown RBP11.07□□□□□ -0.64
HMGA1-206ENST00000478214 PRR9Q5T870 116 aa11.07□□□□□ -0.64
HMGA1-206ENST00000478214 ZNF493Q6ZR52 646 aa11.07□□□□□ -0.64
HMGA1-206ENST00000478214 SSX7Q7RTT5 188 aa11.07□□□□□ -0.64
HMGA1-206ENST00000478214 ZFAND2AQ8N6M9 145 aa11.07□□□□□ -0.64
HMGA1-206ENST00000478214 RXFP4Q8TDU9 374 aa11.07□□□□□ -0.64
HMGA1-206ENST00000478214 TMEM263Q8WUH6 116 aaKnown RBP11.07□□□□□ -0.64
HMGA1-206ENST00000478214 ACTR3CQ9C0K3 210 aaPredicted RBP11.07□□□□□ -0.64
HMGA1-206ENST00000478214 GPX1P07203 203 aa11.06□□□□□ -0.64
HMGA1-206ENST00000478214 NMBP08949 121 aa11.06□□□□□ -0.64
HMGA1-206ENST00000478214 DEFB130BP0DP73 79 aa11.06□□□□□ -0.64
HMGA1-206ENST00000478214 DEFB130AP0DP74 79 aa11.06□□□□□ -0.64
HMGA1-206ENST00000478214 GCHFRP30047 84 aa11.06□□□□□ -0.64
HMGA1-206ENST00000478214 LGALS9CQ6DKI2 356 aa11.06□□□□□ -0.64
HMGA1-206ENST00000478214 CCDC28AQ8IWP9 274 aa11.06□□□□□ -0.64
HMGA1-206ENST00000478214 KCNRGQ8N5I3 272 aa11.06□□□□□ -0.64
HMGA1-206ENST00000478214 CMTM2Q8TAZ6 248 aa11.06□□□□□ -0.64
HMGA1-206ENST00000478214 RPH3ALQ9UNE2 315 aa11.06□□□□□ -0.64
HMGA1-206ENST00000478214 HMSDA8MTL9 139 aa11.05□□□□□ -0.64
HMGA1-206ENST00000478214 ZNF324O75467 553 aaPredicted RBP11.05□□□□□ -0.64
HMGA1-206ENST00000478214 FAM74A1Q5RGS3 127 aa11.05□□□□□ -0.64
HMGA1-206ENST00000478214 SUN5Q8TC36 379 aa11.05□□□□□ -0.64
HMGA1-206ENST00000478214 PYGO2Q9BRQ0 406 aa11.05□□□□□ -0.64
HMGA1-206ENST00000478214 NOP10Q9NPE3 64 aaKnown RBP11.05□□□□□ -0.64
HMGA1-206ENST00000478214 TIMM8BQ9Y5J9 83 aaPredicted RBP11.05□□□□□ -0.64
HMGA1-206ENST00000478214 CXorf1O96002 111 aa11.04□□□□□ -0.64
HMGA1-206ENST00000478214 GNG5P63218 68 aa11.04□□□□□ -0.64
HMGA1-206ENST00000478214 ZNF345Q14585 488 aa11.04□□□□□ -0.64
HMGA1-206ENST00000478214 ZNF726P1Q15940 193 aa11.04□□□□□ -0.64
HMGA1-206ENST00000478214 AKR1C8PQ5T2L2 129 aa11.04□□□□□ -0.64
HMGA1-206ENST00000478214 Q6ZQT7 251 aa11.04□□□□□ -0.64
HMGA1-206ENST00000478214 GOLT1AQ6ZVE7 132 aa11.04□□□□□ -0.64
HMGA1-206ENST00000478214 ARPC5LQ9BPX5 153 aa11.04□□□□□ -0.64
HMGA1-206ENST00000478214 DNAH6Q9C0G6 4158 aa11.03□□□□□ -0.64
HMGA1-206ENST00000478214 TRBV7-9A0A0J9YWB2 115 aa11.03□□□□□ -0.64
HMGA1-206ENST00000478214 IQCF2Q8IXL9 164 aa11.03□□□□□ -0.64
HMGA1-206ENST00000478214 NDUFAF3Q9BU61 184 aa11.03□□□□□ -0.64
HMGA1-206ENST00000478214 TMEM167BQ9NRX6 74 aa11.03□□□□□ -0.64
HMGA1-206ENST00000478214 CTXND1A0A1B0GTU2 59 aa11.02□□□□□ -0.65
HMGA1-206ENST00000478214 ARL6IP6Q8N6S5 226 aa11.02□□□□□ -0.65
HMGA1-206ENST00000478214 ST6GAL2Q96JF0 529 aa11.02□□□□□ -0.65
HMGA1-206ENST00000478214 LINC00467Q9BRT7 94 aa11.02□□□□□ -0.65
HMGA1-206ENST00000478214 TRAV8-1A0A0A6YYK1 113 aa11.01□□□□□ -0.65
HMGA1-206ENST00000478214 A0A0D9SG52 128 aa11.01□□□□□ -0.65
HMGA1-206ENST00000478214 CBY3A6NI87 242 aa11.01□□□□□ -0.65
HMGA1-206ENST00000478214 SNURFLB1AK76 121 aa11.01□□□□□ -0.65
HMGA1-206ENST00000478214 Q6ZNX1 250 aa11.01□□□□□ -0.65
HMGA1-206ENST00000478214 EIF4E3Q8N5X7 224 aaKnown RBP11.01□□□□□ -0.65
HMGA1-206ENST00000478214 TMED6Q8WW62 240 aa11.01□□□□□ -0.65
HMGA1-206ENST00000478214 FAM210BQ96KR6 192 aa11.01□□□□□ -0.65
HMGA1-206ENST00000478214 TMPRSS5Q9H3S3 457 aa11.01□□□□□ -0.65
HMGA1-206ENST00000478214 GSN-AS1Q9NRJ2 163 aa11.01□□□□□ -0.65
HMGA1-206ENST00000478214 LENEPQ9Y5L5 61 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms