RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 C20orf144Q9BQM9 153 aa16.17■□□□□ 0.18
TRAF4-211ENST00000478021 Q9H3A6 140 aa16.17■□□□□ 0.18
TRAF4-211ENST00000478021 TNFSF18Q9UNG2 199 aa16.17■□□□□ 0.18
TRAF4-211ENST00000478021 H7BYZ3 331 aa16.16■□□□□ 0.18
TRAF4-211ENST00000478021 ATP6V0CP27449 155 aa16.16■□□□□ 0.18
TRAF4-211ENST00000478021 LINC00477Q96M19 166 aa16.16■□□□□ 0.18
TRAF4-211ENST00000478021 G3V3Q6 166 aa16.15■□□□□ 0.18
TRAF4-211ENST00000478021 C16orf74Q96GX8 76 aa16.15■□□□□ 0.18
TRAF4-211ENST00000478021 LYRM9A8MSI8 78 aa16.14■□□□□ 0.17
TRAF4-211ENST00000478021 DEFB130BP0DP73 79 aa16.14■□□□□ 0.17
TRAF4-211ENST00000478021 DEFB130AP0DP74 79 aa16.14■□□□□ 0.17
TRAF4-211ENST00000478021 TMEM78Q5T7P6 136 aa16.14■□□□□ 0.17
TRAF4-211ENST00000478021 C9orf47Q6ZRZ4 202 aa16.14■□□□□ 0.17
TRAF4-211ENST00000478021 FAM19A4Q96LR4 140 aa16.14■□□□□ 0.17
TRAF4-211ENST00000478021 SH3BGRL3Q9H299 93 aa16.14■□□□□ 0.17
TRAF4-211ENST00000478021 C7orf71A4D174 169 aa16.13■□□□□ 0.17
TRAF4-211ENST00000478021 SLC25A5P05141 298 aaKnown RBP16.13■□□□□ 0.17
TRAF4-211ENST00000478021 CSN1S1P47710 185 aa16.13■□□□□ 0.17
TRAF4-211ENST00000478021 CDC34P49427 236 aaPredicted RBP16.13■□□□□ 0.17
TRAF4-211ENST00000478021 BTN1A1Q13410 526 aa16.13■□□□□ 0.17
TRAF4-211ENST00000478021 RPL7L1Q6DKI1 246 aaKnown RBP16.13■□□□□ 0.17
TRAF4-211ENST00000478021 OR2G3Q8NGZ4 309 aa16.13■□□□□ 0.17
TRAF4-211ENST00000478021 RNASE8Q8TDE3 154 aaKnown RBP16.13■□□□□ 0.17
TRAF4-211ENST00000478021 TMEM263Q8WUH6 116 aaKnown RBP16.13■□□□□ 0.17
TRAF4-211ENST00000478021 PSMG3Q9BT73 122 aaPredicted RBP16.13■□□□□ 0.17
TRAF4-211ENST00000478021 NDUFAF3Q9BU61 184 aa16.13■□□□□ 0.17
TRAF4-211ENST00000478021 SMLR1H3BR10 107 aa16.12■□□□□ 0.17
TRAF4-211ENST00000478021 CD300CQ08708 224 aa16.12■□□□□ 0.17
TRAF4-211ENST00000478021 PQLC2Q6ZP29 291 aa16.12■□□□□ 0.17
TRAF4-211ENST00000478021 LYPD1Q8N2G4 141 aa16.12■□□□□ 0.17
TRAF4-211ENST00000478021 Q8TAT8 98 aa16.12■□□□□ 0.17
TRAF4-211ENST00000478021 HYLS1Q96M11 299 aa16.12■□□□□ 0.17
TRAF4-211ENST00000478021 NOP10Q9NPE3 64 aaKnown RBP16.12■□□□□ 0.17
TRAF4-211ENST00000478021 KLLNB2CW77 178 aa16.11■□□□□ 0.17
TRAF4-211ENST00000478021 RNASE4P34096 147 aaKnown RBP16.11■□□□□ 0.17
TRAF4-211ENST00000478021 ZNF493Q6ZR52 646 aa16.11■□□□□ 0.17
TRAF4-211ENST00000478021 CCDC28AQ8IWP9 274 aa16.11■□□□□ 0.17
TRAF4-211ENST00000478021 ZNF492Q9P255 531 aa16.11■□□□□ 0.17
TRAF4-211ENST00000478021 RPH3ALQ9UNE2 315 aa16.11■□□□□ 0.17
TRAF4-211ENST00000478021 TIMM8BQ9Y5J9 83 aaPredicted RBP16.11■□□□□ 0.17
TRAF4-211ENST00000478021 GPX1P07203 203 aa16.1■□□□□ 0.17
TRAF4-211ENST00000478021 ARL14EPLP0DKL9 152 aa16.1■□□□□ 0.17
TRAF4-211ENST00000478021 PRR9Q5T870 116 aa16.1■□□□□ 0.17
TRAF4-211ENST00000478021 BORCS7-ASMTA0A0B4J1R7 106 aa16.09■□□□□ 0.17
TRAF4-211ENST00000478021 PGPA6NDG6 321 aa16.09■□□□□ 0.17
TRAF4-211ENST00000478021 ARPC5O15511 151 aa16.09■□□□□ 0.17
TRAF4-211ENST00000478021 CRISP2P16562 243 aa16.09■□□□□ 0.17
TRAF4-211ENST00000478021 ZNF138P52744 262 aa16.09■□□□□ 0.17
TRAF4-211ENST00000478021 ZFAND2AQ8N6M9 145 aa16.09■□□□□ 0.17
TRAF4-211ENST00000478021 RAB24Q969Q5 203 aa16.09■□□□□ 0.17
TRAF4-211ENST00000478021 PYGO2Q9BRQ0 406 aa16.09■□□□□ 0.17
TRAF4-211ENST00000478021 OTORQ9NRC9 128 aa16.09■□□□□ 0.17
TRAF4-211ENST00000478021 DIRC3C9JPN6 131 aa16.08■□□□□ 0.16
TRAF4-211ENST00000478021 STAG3L2P0CL84 134 aa16.08■□□□□ 0.16
TRAF4-211ENST00000478021 STAG3L3P0CL85 134 aa16.08■□□□□ 0.16
TRAF4-211ENST00000478021 SERF2P84101 59 aa16.08■□□□□ 0.16
TRAF4-211ENST00000478021 KMT2AQ03164 3969 aa16.07■□□□□ 0.16
TRAF4-211ENST00000478021 RBAKDNA6NC62 111 aa16.07■□□□□ 0.16
TRAF4-211ENST00000478021 ZNF324O75467 553 aaPredicted RBP16.07■□□□□ 0.16
TRAF4-211ENST00000478021 TMEM88Q6PEY1 159 aa16.07■□□□□ 0.16
TRAF4-211ENST00000478021 Q6ZQT7 251 aa16.07■□□□□ 0.16
TRAF4-211ENST00000478021 GNPNAT1Q96EK6 184 aaPredicted RBP16.07■□□□□ 0.16
TRAF4-211ENST00000478021 SNURFLB1AK76 121 aa16.06■□□□□ 0.16
TRAF4-211ENST00000478021 MBP02144 154 aa16.06■□□□□ 0.16
TRAF4-211ENST00000478021 FAM74A1Q5RGS3 127 aa16.06■□□□□ 0.16
TRAF4-211ENST00000478021 SSX7Q7RTT5 188 aa16.06■□□□□ 0.16
TRAF4-211ENST00000478021 CMTM2Q8TAZ6 248 aa16.06■□□□□ 0.16
TRAF4-211ENST00000478021 RXFP4Q8TDU9 374 aa16.06■□□□□ 0.16
TRAF4-211ENST00000478021 F5H768 121 aa16.05■□□□□ 0.16
TRAF4-211ENST00000478021 FAM210BQ96KR6 192 aa16.05■□□□□ 0.16
TRAF4-211ENST00000478021 CBY3A6NI87 242 aa16.04■□□□□ 0.16
TRAF4-211ENST00000478021 ATP5G1P05496 136 aa16.04■□□□□ 0.16
TRAF4-211ENST00000478021 NMBP08949 121 aa16.04■□□□□ 0.16
TRAF4-211ENST00000478021 GCHFRP30047 84 aa16.04■□□□□ 0.16
TRAF4-211ENST00000478021 ATP5G3P48201 142 aa16.04■□□□□ 0.16
TRAF4-211ENST00000478021 GNG5P63218 68 aa16.04■□□□□ 0.16
TRAF4-211ENST00000478021 GOLT1AQ6ZVE7 132 aa16.04■□□□□ 0.16
TRAF4-211ENST00000478021 ACTR3CQ9C0K3 210 aaPredicted RBP16.04■□□□□ 0.16
TRAF4-211ENST00000478021 GAGE12BA1L429 117 aa16.03■□□□□ 0.16
TRAF4-211ENST00000478021 RGS13O14921 159 aa16.03■□□□□ 0.16
TRAF4-211ENST00000478021 GAGE7O76087 117 aa16.03■□□□□ 0.16
TRAF4-211ENST00000478021 GAGE12FP0CL80 117 aa16.03■□□□□ 0.16
TRAF4-211ENST00000478021 GAGE12GP0CL81 117 aa16.03■□□□□ 0.16
TRAF4-211ENST00000478021 GAGE12IP0CL82 117 aa16.03■□□□□ 0.16
TRAF4-211ENST00000478021 EIF4E3Q8N5X7 224 aaKnown RBP16.03■□□□□ 0.16
TRAF4-211ENST00000478021 P0DMU3 169 aa16.02■□□□□ 0.16
TRAF4-211ENST00000478021 FAM231AP0DMU4 169 aa16.02■□□□□ 0.16
TRAF4-211ENST00000478021 FAM231CP0DMU5 169 aa16.02■□□□□ 0.16
TRAF4-211ENST00000478021 LINC00467Q9BRT7 94 aa16.02■□□□□ 0.16
TRAF4-211ENST00000478021 GSN-AS1Q9NRJ2 163 aa16.02■□□□□ 0.16
TRAF4-211ENST00000478021 CYTL1Q9NRR1 136 aa16.02■□□□□ 0.16
TRAF4-211ENST00000478021 TP53TG3Q9ULZ0 132 aa16.02■□□□□ 0.16
TRAF4-211ENST00000478021 TRBV7-9A0A0J9YWB2 115 aa16.01■□□□□ 0.15
TRAF4-211ENST00000478021 TAAR5O14804 337 aa16.01■□□□□ 0.15
TRAF4-211ENST00000478021 CXorf1O96002 111 aa16.01■□□□□ 0.15
TRAF4-211ENST00000478021 ZNF726P1Q15940 193 aa16.01■□□□□ 0.15
TRAF4-211ENST00000478021 IQCF2Q8IXL9 164 aa16.01■□□□□ 0.15
TRAF4-211ENST00000478021 C11orf72Q8NBR9 251 aa16.01■□□□□ 0.15
TRAF4-211ENST00000478021 TRAV8-1A0A0A6YYK1 113 aa16■□□□□ 0.15
TRAF4-211ENST00000478021 ANXA2RQ3ZCQ2 193 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms