RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 NBEAP1P0C6P0 100 aa6.04□□□□□ -1.44
HDAC6-221ENST00000477561 PYYP10082 97 aa6.04□□□□□ -1.44
HDAC6-221ENST00000477561 CEBPGP53567 150 aa6.04□□□□□ -1.44
HDAC6-221ENST00000477561 FAM74A3Q4VXF1 159 aa6.04□□□□□ -1.44
HDAC6-221ENST00000477561 SVBPQ8N300 66 aa6.04□□□□□ -1.44
HDAC6-221ENST00000477561 CYB561D1Q8N8Q1 229 aa6.04□□□□□ -1.44
HDAC6-221ENST00000477561 LYSTQ99698 3801 aa6.04□□□□□ -1.44
HDAC6-221ENST00000477561 YTHDF2Q9Y5A9 579 aaKnown RBP6.04□□□□□ -1.44
HDAC6-221ENST00000477561 LCE6AA0A183 80 aa6.03□□□□□ -1.44
HDAC6-221ENST00000477561 A6NJY4 79 aa6.03□□□□□ -1.44
HDAC6-221ENST00000477561 SNAPINO95295 136 aa6.03□□□□□ -1.44
HDAC6-221ENST00000477561 APOC3P02656 99 aa6.03□□□□□ -1.44
HDAC6-221ENST00000477561 ATF4P18848 351 aaPredicted RBP6.03□□□□□ -1.44
HDAC6-221ENST00000477561 ID1P41134 155 aa6.03□□□□□ -1.44
HDAC6-221ENST00000477561 GALR1P47211 349 aa6.03□□□□□ -1.44
HDAC6-221ENST00000477561 ATP5G3P48201 142 aa6.03□□□□□ -1.44
HDAC6-221ENST00000477561 MEOX2P50222 304 aa6.03□□□□□ -1.44
HDAC6-221ENST00000477561 FXYD7P58549 80 aa6.03□□□□□ -1.44
HDAC6-221ENST00000477561 PDE6HQ13956 83 aa6.03□□□□□ -1.44
HDAC6-221ENST00000477561 C10orf91Q5T1B1 145 aa6.03□□□□□ -1.44
HDAC6-221ENST00000477561 GDF5OSQ5U4N7 250 aa6.03□□□□□ -1.44
HDAC6-221ENST00000477561 MORN3Q6PF18 240 aaPredicted RBP6.03□□□□□ -1.44
HDAC6-221ENST00000477561 LYPD1Q8N2G4 141 aa6.03□□□□□ -1.44
HDAC6-221ENST00000477561 BLNKQ8WV28 456 aa6.03□□□□□ -1.44
HDAC6-221ENST00000477561 RPUSD4Q96CM3 377 aaKnown RBP6.03□□□□□ -1.44
HDAC6-221ENST00000477561 AGRNO00468 2067 aa6.02□□□□□ -1.45
HDAC6-221ENST00000477561 TRBV19A0A075B6N1 114 aa6.02□□□□□ -1.45
HDAC6-221ENST00000477561 F6UB75 175 aa6.02□□□□□ -1.45
HDAC6-221ENST00000477561 H3BMM0 161 aa6.02□□□□□ -1.45
HDAC6-221ENST00000477561 SOCS3O14543 225 aa6.02□□□□□ -1.45
HDAC6-221ENST00000477561 MRPS12O15235 138 aaKnown RBP6.02□□□□□ -1.45
HDAC6-221ENST00000477561 ZNF253O75346 499 aa6.02□□□□□ -1.45
HDAC6-221ENST00000477561 IGLC2P0DOY2 106 aa6.02□□□□□ -1.45
HDAC6-221ENST00000477561 ADCYAP1P18509 176 aa6.02□□□□□ -1.45
HDAC6-221ENST00000477561 NANOS2P60321 138 aaKnown RBP6.02□□□□□ -1.45
HDAC6-221ENST00000477561 RANP62826 216 aaKnown RBP6.02□□□□□ -1.45
HDAC6-221ENST00000477561 SUMO1P63165 101 aaKnown RBP6.02□□□□□ -1.45
HDAC6-221ENST00000477561 PSG9Q00887 426 aa6.02□□□□□ -1.45
HDAC6-221ENST00000477561 IGFL4Q6B9Z1 124 aa6.02□□□□□ -1.45
HDAC6-221ENST00000477561 HIST1H2BAQ96A08 127 aa6.02□□□□□ -1.45
HDAC6-221ENST00000477561 C11orf52Q96A22 123 aa6.02□□□□□ -1.45
HDAC6-221ENST00000477561 C16orf92Q96LL3 132 aa6.02□□□□□ -1.45
HDAC6-221ENST00000477561 C17orf77Q96MU5 243 aa6.02□□□□□ -1.45
HDAC6-221ENST00000477561 NIPSNAP3BQ9BS92 247 aa6.02□□□□□ -1.45
HDAC6-221ENST00000477561 OTORQ9NRC9 128 aa6.02□□□□□ -1.45
HDAC6-221ENST00000477561 XCL2Q9UBD3 114 aa6.02□□□□□ -1.45
HDAC6-221ENST00000477561 ALMS1Q8TCU4 4167 aa6.01□□□□□ -1.45
HDAC6-221ENST00000477561 A0A087X0K7 114 aa6.01□□□□□ -1.45
HDAC6-221ENST00000477561 PGPA6NDG6 321 aa6.01□□□□□ -1.45
HDAC6-221ENST00000477561 ZNF727A8MUV8 499 aa6.01□□□□□ -1.45
HDAC6-221ENST00000477561 GGTLC3B5MD39 225 aa6.01□□□□□ -1.45
HDAC6-221ENST00000477561 SLC25A5P05141 298 aaKnown RBP6.01□□□□□ -1.45
HDAC6-221ENST00000477561 PRB4P10163 310 aaPredicted RBP6.01□□□□□ -1.45
HDAC6-221ENST00000477561 PNRC1Q12796 327 aaPredicted RBP6.01□□□□□ -1.45
HDAC6-221ENST00000477561 ZNF674Q2M3X9 581 aa6.01□□□□□ -1.45
HDAC6-221ENST00000477561 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.01□□□□□ -1.45
HDAC6-221ENST00000477561 CCDC28AQ8IWP9 274 aa6.01□□□□□ -1.45
HDAC6-221ENST00000477561 C5orf17Q8NAS9 161 aa6.01□□□□□ -1.45
HDAC6-221ENST00000477561 CSNK1G2-AS1Q8NCQ2 148 aa6.01□□□□□ -1.45
HDAC6-221ENST00000477561 OR4B1Q8NGF8 309 aa6.01□□□□□ -1.45
HDAC6-221ENST00000477561 CMTM2Q8TAZ6 248 aa6.01□□□□□ -1.45
HDAC6-221ENST00000477561 TVP23CQ96ET8 276 aa6.01□□□□□ -1.45
HDAC6-221ENST00000477561 C20orf173Q96LM9 149 aa6.01□□□□□ -1.45
HDAC6-221ENST00000477561 SLC50A1Q9BRV3 221 aa6.01□□□□□ -1.45
HDAC6-221ENST00000477561 PARLQ9H300 379 aa6.01□□□□□ -1.45
HDAC6-221ENST00000477561 Q9H3A6 140 aa6.01□□□□□ -1.45
HDAC6-221ENST00000477561 AAMDCQ9H7C9 122 aa6.01□□□□□ -1.45
HDAC6-221ENST00000477561 ZNF586Q9NXT0 402 aa6.01□□□□□ -1.45
HDAC6-221ENST00000477561 HYDINQ4G0P3 5121 aa6.01□□□□□ -1.45
HDAC6-221ENST00000477561 IGHV4-28A0A0C4DH34 117 aa6□□□□□ -1.45
HDAC6-221ENST00000477561 SCO2A0A1W2PP80 73 aa6□□□□□ -1.45
HDAC6-221ENST00000477561 H3BQ15 152 aa6□□□□□ -1.45
HDAC6-221ENST00000477561 M0R036 132 aa6□□□□□ -1.45
HDAC6-221ENST00000477561 ISLRO14498 428 aa6□□□□□ -1.45
HDAC6-221ENST00000477561 NDUFB4O95168 129 aa6□□□□□ -1.45
HDAC6-221ENST00000477561 S100A9P06702 114 aaKnown RBP6□□□□□ -1.45
HDAC6-221ENST00000477561 SNRPCP09234 159 aaKnown RBP6□□□□□ -1.45
HDAC6-221ENST00000477561 RBMY1A1P0DJD3 496 aaKnown RBP6□□□□□ -1.45
HDAC6-221ENST00000477561 RBMY1CP0DJD4 496 aa6□□□□□ -1.45
HDAC6-221ENST00000477561 HLA-DRB4P13762 266 aa6□□□□□ -1.45
HDAC6-221ENST00000477561 AKR1C3P42330 323 aa6□□□□□ -1.45
HDAC6-221ENST00000477561 CSN1S1P47710 185 aa6□□□□□ -1.45
HDAC6-221ENST00000477561 CNN1P51911 297 aaKnown RBP6□□□□□ -1.45
HDAC6-221ENST00000477561 NUTF2P61970 127 aaKnown RBP6□□□□□ -1.45
HDAC6-221ENST00000477561 RBMY1FQ15415 496 aaKnown RBP6□□□□□ -1.45
HDAC6-221ENST00000477561 TMEM241Q24JQ0 296 aa6□□□□□ -1.45
HDAC6-221ENST00000477561 SAMD13Q5VXD3 122 aa6□□□□□ -1.45
HDAC6-221ENST00000477561 CEMP1Q6PRD7 247 aaPredicted RBP6□□□□□ -1.45
HDAC6-221ENST00000477561 FOXI2Q6ZQN5 318 aa6□□□□□ -1.45
HDAC6-221ENST00000477561 RNF182Q8N6D2 247 aa6□□□□□ -1.45
HDAC6-221ENST00000477561 ARL6IP6Q8N6S5 226 aa6□□□□□ -1.45
HDAC6-221ENST00000477561 Q8NAQ8 132 aa6□□□□□ -1.45
HDAC6-221ENST00000477561 C11orf45Q8TAV5 145 aa6□□□□□ -1.45
HDAC6-221ENST00000477561 PHLDA1Q8WV24 401 aaPredicted RBP6□□□□□ -1.45
HDAC6-221ENST00000477561 SMIM7Q9BQ49 75 aa6□□□□□ -1.45
HDAC6-221ENST00000477561 SAV1Q9H4B6 383 aaPredicted RBP6□□□□□ -1.45
HDAC6-221ENST00000477561 NAT8Q9UHE5 227 aa6□□□□□ -1.45
HDAC6-221ENST00000477561 EPDR1Q9UM22 224 aa6□□□□□ -1.45
HDAC6-221ENST00000477561 HLA-DRB4X5D2U9 266 aa6□□□□□ -1.45
HDAC6-221ENST00000477561 X6R8D5 127 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms