RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 ZFP82Q8N141 532 aa5.11□□□□□ -1.59
LDB3-206ENST00000477489 WFDC11Q8NEX6 87 aa5.11□□□□□ -1.59
LDB3-206ENST00000477489 FRZBQ92765 325 aa5.11□□□□□ -1.59
LDB3-206ENST00000477489 LINC00479Q96M42 142 aa5.11□□□□□ -1.59
LDB3-206ENST00000477489 NOL4LQ96MY1 436 aaPredicted RBP5.11□□□□□ -1.59
LDB3-206ENST00000477489 RNASE7Q9H1E1 156 aaKnown RBP5.11□□□□□ -1.59
LDB3-206ENST00000477489 ZNF702PQ9H963 129 aa5.11□□□□□ -1.59
LDB3-206ENST00000477489 SERTAD4Q9NUC0 356 aa5.11□□□□□ -1.59
LDB3-206ENST00000477489 AURKAIP1Q9NWT8 199 aaPredicted RBP5.11□□□□□ -1.59
LDB3-206ENST00000477489 SMAD5-AS1Q9Y6J3 95 aa5.11□□□□□ -1.59
LDB3-206ENST00000477489 IGHV7-4-1A0A0J9YVY3 117 aa5.1□□□□□ -1.59
LDB3-206ENST00000477489 OVOL1O14753 267 aa5.1□□□□□ -1.59
LDB3-206ENST00000477489 HOXA3O43365 443 aaPredicted RBP5.1□□□□□ -1.59
LDB3-206ENST00000477489 SMIM6P0DI80 62 aa5.1□□□□□ -1.59
LDB3-206ENST00000477489 FABP9Q0Z7S8 132 aa5.1□□□□□ -1.59
LDB3-206ENST00000477489 DNLZQ5SXM8 178 aa5.1□□□□□ -1.59
LDB3-206ENST00000477489 LCN12Q6JVE5 192 aa5.1□□□□□ -1.59
LDB3-206ENST00000477489 RBPMS2Q6ZRY4 209 aaKnown RBP5.1□□□□□ -1.59
LDB3-206ENST00000477489 C9orf47Q6ZRZ4 202 aa5.1□□□□□ -1.59
LDB3-206ENST00000477489 Q71RC1 249 aaPredicted RBP5.1□□□□□ -1.59
LDB3-206ENST00000477489 PRNTQ86SH4 94 aa5.1□□□□□ -1.59
LDB3-206ENST00000477489 MAPK1IP1LQ8NDC0 245 aa5.1□□□□□ -1.59
LDB3-206ENST00000477489 PACRGQ96M98 296 aaPredicted RBP5.1□□□□□ -1.59
LDB3-206ENST00000477489 C17orf77Q96MU5 243 aa5.1□□□□□ -1.59
LDB3-206ENST00000477489 PRR25Q96S07 402 aa5.1□□□□□ -1.59
LDB3-206ENST00000477489 ASCL2Q99929 193 aa5.1□□□□□ -1.59
LDB3-206ENST00000477489 KRTAP4-7Q9BYR0 210 aa5.1□□□□□ -1.59
LDB3-206ENST00000477489 KLK15Q9H2R5 256 aa5.1□□□□□ -1.59
LDB3-206ENST00000477489 NRN1Q9NPD7 142 aa5.1□□□□□ -1.59
LDB3-206ENST00000477489 SMPXQ9UHP9 88 aa5.1□□□□□ -1.59
LDB3-206ENST00000477489 RPH3ALQ9UNE2 315 aa5.1□□□□□ -1.59
LDB3-206ENST00000477489 TACC2O95359 2948 aa5.09□□□□□ -1.59
LDB3-206ENST00000477489 M0R3E3 92 aa5.09□□□□□ -1.59
LDB3-206ENST00000477489 ESDP10768 282 aa5.09□□□□□ -1.59
LDB3-206ENST00000477489 S100A2P29034 98 aa5.09□□□□□ -1.59
LDB3-206ENST00000477489 ID1P41134 155 aa5.09□□□□□ -1.59
LDB3-206ENST00000477489 Q0VG73 95 aa5.09□□□□□ -1.59
LDB3-206ENST00000477489 SMUG1Q53HV7 270 aa5.09□□□□□ -1.59
LDB3-206ENST00000477489 OR10J3Q5JRS4 329 aa5.09□□□□□ -1.59
LDB3-206ENST00000477489 FAM162BQ5T6X4 162 aa5.09□□□□□ -1.59
LDB3-206ENST00000477489 SIGLECL1Q8N7X8 197 aa5.09□□□□□ -1.59
LDB3-206ENST00000477489 GATD1Q8NB37 220 aa5.09□□□□□ -1.59
LDB3-206ENST00000477489 NUP35Q8NFH5 326 aa5.09□□□□□ -1.59
LDB3-206ENST00000477489 BORCS7Q96B45 105 aa5.09□□□□□ -1.59
LDB3-206ENST00000477489 LINC00477Q96M19 166 aa5.09□□□□□ -1.59
LDB3-206ENST00000477489 JMJD8Q96S16 334 aa5.09□□□□□ -1.59
LDB3-206ENST00000477489 NEU1Q99519 415 aa5.09□□□□□ -1.59
LDB3-206ENST00000477489 LINC00527Q9UJ94 153 aa5.09□□□□□ -1.59
LDB3-206ENST00000477489 FN1P02751 2386 aaKnown RBP5.09□□□□□ -1.59
LDB3-206ENST00000477489 FBN1P35555 2871 aaKnown RBP5.09□□□□□ -1.6
LDB3-206ENST00000477489 TRAV2A0A0B4J234 112 aa5.08□□□□□ -1.6
LDB3-206ENST00000477489 A0A1B0GXF2 115 aa5.08□□□□□ -1.6
LDB3-206ENST00000477489 HIGD1CA8MV81 97 aa5.08□□□□□ -1.6
LDB3-206ENST00000477489 SNURFLB1AK76 121 aa5.08□□□□□ -1.6
LDB3-206ENST00000477489 H3BTX0 84 aa5.08□□□□□ -1.6
LDB3-206ENST00000477489 M0QZ24 198 aa5.08□□□□□ -1.6
LDB3-206ENST00000477489 SOCS3O14543 225 aa5.08□□□□□ -1.6
LDB3-206ENST00000477489 ZNF138P52744 262 aa5.08□□□□□ -1.6
LDB3-206ENST00000477489 NDUFA6P56556 154 aa5.08□□□□□ -1.6
LDB3-206ENST00000477489 HBBP68871 147 aa5.08□□□□□ -1.6
LDB3-206ENST00000477489 HIST1H1AQ02539 215 aaPredicted RBP5.08□□□□□ -1.6
LDB3-206ENST00000477489 RIGQ13278 110 aa5.08□□□□□ -1.6
LDB3-206ENST00000477489 KRTAP19-4Q3LI73 84 aa5.08□□□□□ -1.6
LDB3-206ENST00000477489 TMEM78Q5T7P6 136 aa5.08□□□□□ -1.6
LDB3-206ENST00000477489 PRR27Q6MZM9 219 aa5.08□□□□□ -1.6
LDB3-206ENST00000477489 TMEM136Q6ZRR5 245 aa5.08□□□□□ -1.6
LDB3-206ENST00000477489 LINC00518Q8N0U6 118 aa5.08□□□□□ -1.6
LDB3-206ENST00000477489 HIST3H2BBQ8N257 126 aa5.08□□□□□ -1.6
LDB3-206ENST00000477489 NHLRC2Q8NBF2 726 aa5.08□□□□□ -1.6
LDB3-206ENST00000477489 OR2D3Q8NGH3 330 aa5.08□□□□□ -1.6
LDB3-206ENST00000477489 C4orf3Q8WVX3 66 aa5.08□□□□□ -1.6
LDB3-206ENST00000477489 ZC2HC1AQ96GY0 325 aa5.08□□□□□ -1.6
LDB3-206ENST00000477489 C16orf92Q96LL3 132 aa5.08□□□□□ -1.6
LDB3-206ENST00000477489 ODF3Q96PU9 254 aa5.08□□□□□ -1.6
LDB3-206ENST00000477489 RHPN1-AS1Q9BWJ2 59 aa5.08□□□□□ -1.6
LDB3-206ENST00000477489 ACANP16112 2415 aa5.07□□□□□ -1.6
LDB3-206ENST00000477489 NBEAL1Q6ZS30 2694 aa5.07□□□□□ -1.6
LDB3-206ENST00000477489 TRAV8-1A0A0A6YYK1 113 aa5.07□□□□□ -1.6
LDB3-206ENST00000477489 TRAV8-2A0A0B4J237 113 aa5.07□□□□□ -1.6
LDB3-206ENST00000477489 IGHV3-35A0A0C4DH35 117 aa5.07□□□□□ -1.6
LDB3-206ENST00000477489 FABP5P3A8MUU1 101 aa5.07□□□□□ -1.6
LDB3-206ENST00000477489 F2Z2F3 143 aa5.07□□□□□ -1.6
LDB3-206ENST00000477489 TRBV12-3P01733 135 aa5.07□□□□□ -1.6
LDB3-206ENST00000477489 IGHV3-11P01762 117 aa5.07□□□□□ -1.6
LDB3-206ENST00000477489 SNRPCP09234 159 aaKnown RBP5.07□□□□□ -1.6
LDB3-206ENST00000477489 AKR1D1P51857 326 aa5.07□□□□□ -1.6
LDB3-206ENST00000477489 PAFAH1B2P68402 229 aa5.07□□□□□ -1.6
LDB3-206ENST00000477489 KRTAP1-1Q07627 177 aa5.07□□□□□ -1.6
LDB3-206ENST00000477489 LCE4AQ5TA78 99 aa5.07□□□□□ -1.6
LDB3-206ENST00000477489 UNQ9165/PRO28630Q6UXU0 137 aa5.07□□□□□ -1.6
LDB3-206ENST00000477489 ZNF418Q8TF45 676 aaPredicted RBP5.07□□□□□ -1.6
LDB3-206ENST00000477489 TMEM18Q96B42 140 aa5.07□□□□□ -1.6
LDB3-206ENST00000477489 C16orf95Q9H693 158 aa5.07□□□□□ -1.6
LDB3-206ENST00000477489 PEMTQ9UBM1 199 aa5.07□□□□□ -1.6
LDB3-206ENST00000477489 IGKV2-40A0A087WW87 121 aaPredicted RBP5.06□□□□□ -1.6
LDB3-206ENST00000477489 A0A1B0GUT8 65 aa5.06□□□□□ -1.6
LDB3-206ENST00000477489 TMEM213A2RRL7 107 aa5.06□□□□□ -1.6
LDB3-206ENST00000477489 TMEM189A5PLL7 270 aa5.06□□□□□ -1.6
LDB3-206ENST00000477489 DNAJC9-AS1A6NH13 148 aa5.06□□□□□ -1.6
LDB3-206ENST00000477489 IGKV2D-40P01614 121 aaPredicted RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms