RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 RBMY1FQ15415 496 aaKnown RBP8.92□□□□□ -0.98
CLCNKA-205ENST00000477360 IGFL4Q6B9Z1 124 aa8.92□□□□□ -0.98
CLCNKA-205ENST00000477360 ZFAND6Q6FIF0 208 aa8.92□□□□□ -0.98
CLCNKA-205ENST00000477360 ZNF680Q8NEM1 530 aa8.92□□□□□ -0.98
CLCNKA-205ENST00000477360 LYPD6BQ8NI32 183 aa8.92□□□□□ -0.98
CLCNKA-205ENST00000477360 LINC00477Q96M19 166 aa8.92□□□□□ -0.98
CLCNKA-205ENST00000477360 A0A1W2PRE2 83 aa8.91□□□□□ -0.98
CLCNKA-205ENST00000477360 CXorf65A6NEN9 183 aa8.91□□□□□ -0.98
CLCNKA-205ENST00000477360 TEX46H3BTG2 121 aa8.91□□□□□ -0.98
CLCNKA-205ENST00000477360 CRXO43186 299 aaPredicted RBP8.91□□□□□ -0.98
CLCNKA-205ENST00000477360 IFNA7P01567 189 aa8.91□□□□□ -0.98
CLCNKA-205ENST00000477360 SLC25A5P05141 298 aaKnown RBP8.91□□□□□ -0.98
CLCNKA-205ENST00000477360 HLA-DMBP28068 263 aa8.91□□□□□ -0.98
CLCNKA-205ENST00000477360 FAM74A1Q5RGS3 127 aa8.91□□□□□ -0.98
CLCNKA-205ENST00000477360 C1orf158Q8N1D5 194 aa8.91□□□□□ -0.98
CLCNKA-205ENST00000477360 SFT2D1Q8WV19 159 aa8.91□□□□□ -0.98
CLCNKA-205ENST00000477360 PPP1R14DQ9NXH3 145 aa8.91□□□□□ -0.98
CLCNKA-205ENST00000477360 TENM2Q9NT68 2774 aa8.9□□□□□ -0.98
CLCNKA-205ENST00000477360 LCE6AA0A183 80 aa8.9□□□□□ -0.98
CLCNKA-205ENST00000477360 RBAKDNA6NC62 111 aa8.9□□□□□ -0.98
CLCNKA-205ENST00000477360 EIF3GO75821 320 aaKnown RBP eCLIP8.9□□□□□ -0.98
CLCNKA-205ENST00000477360 SPART-AS1P0CW21 52 aa8.9□□□□□ -0.98
CLCNKA-205ENST00000477360 PPT1P50897 306 aa8.9□□□□□ -0.98
CLCNKA-205ENST00000477360 SPINK13Q1W4C9 94 aa8.9□□□□□ -0.98
CLCNKA-205ENST00000477360 RRN3P1Q2M238 152 aa8.9□□□□□ -0.98
CLCNKA-205ENST00000477360 C9orf47Q6ZRZ4 202 aa8.9□□□□□ -0.98
CLCNKA-205ENST00000477360 RXFP4Q8TDU9 374 aa8.9□□□□□ -0.98
CLCNKA-205ENST00000477360 PHLDA1Q8WV24 401 aaPredicted RBP8.9□□□□□ -0.98
CLCNKA-205ENST00000477360 BLNKQ8WV28 456 aa8.9□□□□□ -0.98
CLCNKA-205ENST00000477360 NKX6-2Q9C056 277 aaPredicted RBP8.9□□□□□ -0.98
CLCNKA-205ENST00000477360 DYNC2H1Q8NCM8 4307 aaKnown RBP8.89□□□□□ -0.99
CLCNKA-205ENST00000477360 H3BTX0 84 aa8.89□□□□□ -0.99
CLCNKA-205ENST00000477360 H7BYZ3 331 aa8.89□□□□□ -0.99
CLCNKA-205ENST00000477360 LEPP41159 167 aa8.89□□□□□ -0.99
CLCNKA-205ENST00000477360 FGF8P55075 233 aaPredicted RBP8.89□□□□□ -0.99
CLCNKA-205ENST00000477360 TAS2R60P59551 318 aa8.89□□□□□ -0.99
CLCNKA-205ENST00000477360 ZNF493Q6ZR52 646 aa8.89□□□□□ -0.99
CLCNKA-205ENST00000477360 TMEM208Q9BTX3 173 aa8.89□□□□□ -0.99
CLCNKA-205ENST00000477360 Q9H3A6 140 aa8.89□□□□□ -0.99
CLCNKA-205ENST00000477360 TMPRSS5Q9H3S3 457 aa8.89□□□□□ -0.99
CLCNKA-205ENST00000477360 OTORQ9NRC9 128 aa8.89□□□□□ -0.99
CLCNKA-205ENST00000477360 LENEPQ9Y5L5 61 aa8.89□□□□□ -0.99
CLCNKA-205ENST00000477360 STARD9Q9P2P6 4700 aa8.88□□□□□ -0.99
CLCNKA-205ENST00000477360 PRAC2D3DTV9 90 aa8.88□□□□□ -0.99
CLCNKA-205ENST00000477360 M0R2Z0 102 aa8.88□□□□□ -0.99
CLCNKA-205ENST00000477360 SNRPCP09234 159 aaKnown RBP8.88□□□□□ -0.99
CLCNKA-205ENST00000477360 CRISP2P16562 243 aa8.88□□□□□ -0.99
CLCNKA-205ENST00000477360 CSN1S1P47710 185 aa8.88□□□□□ -0.99
CLCNKA-205ENST00000477360 RANP62826 216 aaKnown RBP8.88□□□□□ -0.99
CLCNKA-205ENST00000477360 ZNF767PQ75MW2 155 aa8.88□□□□□ -0.99
CLCNKA-205ENST00000477360 FAM210BQ96KR6 192 aa8.88□□□□□ -0.99
CLCNKA-205ENST00000477360 FAM19A4Q96LR4 140 aa8.88□□□□□ -0.99
CLCNKA-205ENST00000477360 TXNDC17Q9BRA2 123 aa8.88□□□□□ -0.99
CLCNKA-205ENST00000477360 TRAV10A0A0B4J240 114 aa8.87□□□□□ -0.99
CLCNKA-205ENST00000477360 LOC102723971A0A1B0GUV8 181 aa8.87□□□□□ -0.99
CLCNKA-205ENST00000477360 FAM74A7A6NL05 159 aa8.87□□□□□ -0.99
CLCNKA-205ENST00000477360 LYRM9A8MSI8 78 aa8.87□□□□□ -0.99
CLCNKA-205ENST00000477360 M0R3E3 92 aa8.87□□□□□ -0.99
CLCNKA-205ENST00000477360 CT45A10P0DMU9 189 aa8.87□□□□□ -0.99
CLCNKA-205ENST00000477360 FXYD7P58549 80 aa8.87□□□□□ -0.99
CLCNKA-205ENST00000477360 IFITM2Q01629 132 aa8.87□□□□□ -0.99
CLCNKA-205ENST00000477360 ICAM4Q14773 271 aa8.87□□□□□ -0.99
CLCNKA-205ENST00000477360 EXOC3-AS1Q8N2X6 119 aa8.87□□□□□ -0.99
CLCNKA-205ENST00000477360 LINC00467Q9BRT7 94 aa8.87□□□□□ -0.99
CLCNKA-205ENST00000477360 TCEAL7Q9BRU2 100 aa8.87□□□□□ -0.99
CLCNKA-205ENST00000477360 MANBALQ9NQG1 85 aa8.87□□□□□ -0.99
CLCNKA-205ENST00000477360 SERTM2A0A1B0GWG4 89 aa8.86□□□□□ -0.99
CLCNKA-205ENST00000477360 PGPA6NDG6 321 aa8.86□□□□□ -0.99
CLCNKA-205ENST00000477360 KLLNB2CW77 178 aa8.86□□□□□ -0.99
CLCNKA-205ENST00000477360 GGTLC3B5MD39 225 aa8.86□□□□□ -0.99
CLCNKA-205ENST00000477360 DEFB4AO15263 64 aa8.86□□□□□ -0.99
CLCNKA-205ENST00000477360 TAGLN2P37802 199 aaKnown RBP8.86□□□□□ -0.99
CLCNKA-205ENST00000477360 NANOS2P60321 138 aaKnown RBP8.86□□□□□ -0.99
CLCNKA-205ENST00000477360 TMEM78Q5T7P6 136 aa8.86□□□□□ -0.99
CLCNKA-205ENST00000477360 CCDC28AQ8IWP9 274 aa8.86□□□□□ -0.99
CLCNKA-205ENST00000477360 IQCF2Q8IXL9 164 aa8.86□□□□□ -0.99
CLCNKA-205ENST00000477360 C5orf17Q8NAS9 161 aa8.86□□□□□ -0.99
CLCNKA-205ENST00000477360 C2CD4CQ8TF44 421 aa8.86□□□□□ -0.99
CLCNKA-205ENST00000477360 PYGO2Q9BRQ0 406 aa8.86□□□□□ -0.99
CLCNKA-205ENST00000477360 AGPAT4-IT1Q9H0P7 198 aa8.86□□□□□ -0.99
CLCNKA-205ENST00000477360 DKK2Q9UBU2 259 aa8.86□□□□□ -0.99
CLCNKA-205ENST00000477360 YTHDF2Q9Y5A9 579 aaKnown RBP8.86□□□□□ -0.99
CLCNKA-205ENST00000477360 IGHV3OR16-12A0A075B7B8 117 aa8.85□□□□□ -0.99
CLCNKA-205ENST00000477360 FBLL1A6NHQ2 334 aaKnown RBP8.85□□□□□ -0.99
CLCNKA-205ENST00000477360 NDUFS6O75380 124 aaKnown RBP8.85□□□□□ -0.99
CLCNKA-205ENST00000477360 ZNF138P52744 262 aa8.85□□□□□ -0.99
CLCNKA-205ENST00000477360 SUMO1P63165 101 aaKnown RBP8.85□□□□□ -0.99
CLCNKA-205ENST00000477360 CCL20P78556 96 aa8.85□□□□□ -0.99
CLCNKA-205ENST00000477360 C12orf74Q32Q52 190 aa8.85□□□□□ -0.99
CLCNKA-205ENST00000477360 GFI1BQ5VTD9 330 aa8.85□□□□□ -0.99
CLCNKA-205ENST00000477360 TMEM263Q8WUH6 116 aaKnown RBP8.85□□□□□ -0.99
CLCNKA-205ENST00000477360 C16orf74Q96GX8 76 aa8.85□□□□□ -0.99
CLCNKA-205ENST00000477360 LINC01587Q99440 93 aa8.85□□□□□ -0.99
CLCNKA-205ENST00000477360 DIRC3C9JPN6 131 aa8.84□□□□□ -0.99
CLCNKA-205ENST00000477360 PAGE4O60829 102 aa8.84□□□□□ -0.99
CLCNKA-205ENST00000477360 IFNA1P01562 189 aa8.84□□□□□ -0.99
CLCNKA-205ENST00000477360 CMTM2Q8TAZ6 248 aa8.84□□□□□ -0.99
CLCNKA-205ENST00000477360 NIPSNAP3BQ9BS92 247 aa8.84□□□□□ -0.99
CLCNKA-205ENST00000477360 ZNF492Q9P255 531 aa8.84□□□□□ -0.99
CLCNKA-205ENST00000477360 TRAV12-2A0A075B6T6 113 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms