RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 LY96Q9Y6Y9 160 aa8.05□□□□□ -1.12
HDAC6-219ENST00000476625 IGLV5-52A0A0A0MRZ9 124 aa8.04□□□□□ -1.12
HDAC6-219ENST00000476625 LRCOL1A6NCL2 159 aa8.04□□□□□ -1.12
HDAC6-219ENST00000476625 FAM229AH3BQW9 127 aa8.04□□□□□ -1.12
HDAC6-219ENST00000476625 CCSO14618 274 aa8.04□□□□□ -1.12
HDAC6-219ENST00000476625 NDUFB4O95168 129 aa8.04□□□□□ -1.12
HDAC6-219ENST00000476625 SLC25A5P05141 298 aaKnown RBP8.04□□□□□ -1.12
HDAC6-219ENST00000476625 PYYP10082 97 aa8.04□□□□□ -1.12
HDAC6-219ENST00000476625 FAUP35544 74 aaKnown RBP8.04□□□□□ -1.12
HDAC6-219ENST00000476625 ZNF680Q8NEM1 530 aa8.04□□□□□ -1.12
HDAC6-219ENST00000476625 OR10P1Q8NGE3 313 aa8.04□□□□□ -1.12
HDAC6-219ENST00000476625 ZNF479Q96JC4 524 aa8.04□□□□□ -1.12
HDAC6-219ENST00000476625 ODF3Q96PU9 254 aa8.04□□□□□ -1.12
HDAC6-219ENST00000476625 VGLL1Q99990 258 aa8.04□□□□□ -1.12
HDAC6-219ENST00000476625 PXMP4Q9Y6I8 212 aa8.04□□□□□ -1.12
HDAC6-219ENST00000476625 A6NHS1 94 aa8.03□□□□□ -1.12
HDAC6-219ENST00000476625 K7EQD1 137 aa8.03□□□□□ -1.12
HDAC6-219ENST00000476625 ZNF415Q09FC8 603 aa8.03□□□□□ -1.12
HDAC6-219ENST00000476625 MUC21Q5SSG8 566 aa8.03□□□□□ -1.12
HDAC6-219ENST00000476625 NRARPQ7Z6K4 114 aa8.03□□□□□ -1.12
HDAC6-219ENST00000476625 Q8TAT8 98 aa8.03□□□□□ -1.12
HDAC6-219ENST00000476625 BLNKQ8WV28 456 aa8.03□□□□□ -1.12
HDAC6-219ENST00000476625 GSKIPQ9P0R6 139 aa8.03□□□□□ -1.12
HDAC6-219ENST00000476625 PRO0255Q9UI72 69 aa8.03□□□□□ -1.12
HDAC6-219ENST00000476625 HHLA3Q9XRX5 114 aa8.03□□□□□ -1.12
HDAC6-219ENST00000476625 C7orf66A4D0T2 115 aa8.02□□□□□ -1.13
HDAC6-219ENST00000476625 MBPP02686 304 aaPredicted RBP8.02□□□□□ -1.13
HDAC6-219ENST00000476625 CAMLGP49069 296 aa8.02□□□□□ -1.13
HDAC6-219ENST00000476625 WFDC2Q14508 124 aa8.02□□□□□ -1.13
HDAC6-219ENST00000476625 IAH1Q2TAA2 248 aaPredicted RBP8.02□□□□□ -1.13
HDAC6-219ENST00000476625 ANXA2RQ3ZCQ2 193 aa8.02□□□□□ -1.13
HDAC6-219ENST00000476625 GCSAMLQ5JQS6 135 aa8.02□□□□□ -1.13
HDAC6-219ENST00000476625 SPANXN2Q5MJ10 180 aa8.02□□□□□ -1.13
HDAC6-219ENST00000476625 LCE2DQ5TA82 110 aaPredicted RBP8.02□□□□□ -1.13
HDAC6-219ENST00000476625 NEGR1Q7Z3B1 354 aa8.02□□□□□ -1.13
HDAC6-219ENST00000476625 NFE4Q86UQ8 179 aa8.02□□□□□ -1.13
HDAC6-219ENST00000476625 ZFAND2AQ8N6M9 145 aa8.02□□□□□ -1.13
HDAC6-219ENST00000476625 DEDD2Q8WXF8 326 aa8.02□□□□□ -1.13
HDAC6-219ENST00000476625 SLC25A21Q9BQT8 299 aaPredicted RBP8.02□□□□□ -1.13
HDAC6-219ENST00000476625 TRBV19A0A075B6N1 114 aa8.01□□□□□ -1.13
HDAC6-219ENST00000476625 TRGV4A0A0C4DH28 118 aa8.01□□□□□ -1.13
HDAC6-219ENST00000476625 FNDC10F2Z333 226 aa8.01□□□□□ -1.13
HDAC6-219ENST00000476625 RGS13O14921 159 aa8.01□□□□□ -1.13
HDAC6-219ENST00000476625 MPDU1O75352 247 aa8.01□□□□□ -1.13
HDAC6-219ENST00000476625 CST7O76096 145 aa8.01□□□□□ -1.13
HDAC6-219ENST00000476625 GPX1P07203 203 aa8.01□□□□□ -1.13
HDAC6-219ENST00000476625 CRYGDP07320 174 aa8.01□□□□□ -1.13
HDAC6-219ENST00000476625 GYPEP15421 78 aa8.01□□□□□ -1.13
HDAC6-219ENST00000476625 MRPL23Q16540 153 aaKnown RBP8.01□□□□□ -1.13
HDAC6-219ENST00000476625 PXDC1Q5TGL8 231 aa8.01□□□□□ -1.13
HDAC6-219ENST00000476625 FAM122CQ6P4D5 195 aa8.01□□□□□ -1.13
HDAC6-219ENST00000476625 Q9HAA7 133 aa8.01□□□□□ -1.13
HDAC6-219ENST00000476625 DNAJC4Q9NNZ3 241 aa8.01□□□□□ -1.13
HDAC6-219ENST00000476625 UBR4Q5T4S7 5183 aa8□□□□□ -1.13
HDAC6-219ENST00000476625 HMCN2Q8NDA2 5059 aa8□□□□□ -1.13
HDAC6-219ENST00000476625 IGHV1OR15-1A0A075B7D0 117 aa8□□□□□ -1.13
HDAC6-219ENST00000476625 PIGBOS1A0A0B4J2F0 54 aa8□□□□□ -1.13
HDAC6-219ENST00000476625 UBE2L5PA0A1B0GUS4 154 aa8□□□□□ -1.13
HDAC6-219ENST00000476625 FAM24AA6NFZ4 105 aa8□□□□□ -1.13
HDAC6-219ENST00000476625 TSC22D2O75157 780 aa8□□□□□ -1.13
HDAC6-219ENST00000476625 SRIP30626 198 aa8□□□□□ -1.13
HDAC6-219ENST00000476625 AP3S2P59780 193 aa8□□□□□ -1.13
HDAC6-219ENST00000476625 LINC00477Q96M19 166 aa8□□□□□ -1.13
HDAC6-219ENST00000476625 LSM5Q9Y4Y9 91 aaKnown RBP8□□□□□ -1.13
HDAC6-219ENST00000476625 LRP1Q07954 4544 aaKnown RBP8□□□□□ -1.13
HDAC6-219ENST00000476625 IGHV3-16A0A0C4DH30 117 aa7.99□□□□□ -1.13
HDAC6-219ENST00000476625 NDUFB6O95139 128 aa7.99□□□□□ -1.13
HDAC6-219ENST00000476625 CRISP2P16562 243 aa7.99□□□□□ -1.13
HDAC6-219ENST00000476625 BTCP35070 178 aa7.99□□□□□ -1.13
HDAC6-219ENST00000476625 BAK1Q16611 211 aa7.99□□□□□ -1.13
HDAC6-219ENST00000476625 LINC01620Q4KN68 170 aa7.99□□□□□ -1.13
HDAC6-219ENST00000476625 IBA57Q5T440 356 aaKnown RBP7.99□□□□□ -1.13
HDAC6-219ENST00000476625 S100A7AQ86SG5 101 aa7.99□□□□□ -1.13
HDAC6-219ENST00000476625 LINC00528Q8N1L1 170 aa7.99□□□□□ -1.13
HDAC6-219ENST00000476625 Q8N3U1 123 aa7.99□□□□□ -1.13
HDAC6-219ENST00000476625 Q8N814 137 aa7.99□□□□□ -1.13
HDAC6-219ENST00000476625 S100ZQ8WXG8 99 aa7.99□□□□□ -1.13
HDAC6-219ENST00000476625 ARPC5LQ9BPX5 153 aa7.99□□□□□ -1.13
HDAC6-219ENST00000476625 TMEM70Q9BUB7 260 aa7.99□□□□□ -1.13
HDAC6-219ENST00000476625 MRPL32Q9BYC8 188 aaKnown RBP7.99□□□□□ -1.13
HDAC6-219ENST00000476625 TRAV9-2A0A087WT02 112 aa7.98□□□□□ -1.13
HDAC6-219ENST00000476625 EVI2AP22794 236 aa7.98□□□□□ -1.13
HDAC6-219ENST00000476625 BCAP31P51572 246 aa7.98□□□□□ -1.13
HDAC6-219ENST00000476625 GUK1Q16774 197 aa7.98□□□□□ -1.13
HDAC6-219ENST00000476625 C4orf46Q504U0 113 aa7.98□□□□□ -1.13
HDAC6-219ENST00000476625 C9orf47Q6ZRZ4 202 aa7.98□□□□□ -1.13
HDAC6-219ENST00000476625 MRPL53Q96EL3 112 aaKnown RBP7.98□□□□□ -1.13
HDAC6-219ENST00000476625 SLC25A2Q9BXI2 301 aa7.98□□□□□ -1.13
HDAC6-219ENST00000476625 C11orf1Q9H5F2 150 aa7.98□□□□□ -1.13
HDAC6-219ENST00000476625 SLC39A9Q9NUM3 307 aa7.98□□□□□ -1.13
HDAC6-219ENST00000476625 WDR83OSQ9Y284 106 aa7.98□□□□□ -1.13
HDAC6-219ENST00000476625 TIMM9Q9Y5J7 89 aa7.98□□□□□ -1.13
HDAC6-219ENST00000476625 IGSF23A1L1A6 192 aa7.97□□□□□ -1.13
HDAC6-219ENST00000476625 LECT2O14960 151 aa7.97□□□□□ -1.13
HDAC6-219ENST00000476625 PSCAO43653 123 aa7.97□□□□□ -1.13
HDAC6-219ENST00000476625 IGHV3-30P01768 117 aa7.97□□□□□ -1.13
HDAC6-219ENST00000476625 IGHV3-33P01772 117 aa7.97□□□□□ -1.13
HDAC6-219ENST00000476625 IGHV3-30-3P0DP02 117 aa7.97□□□□□ -1.13
HDAC6-219ENST00000476625 IGHV3-30-5P0DP03 117 aa7.97□□□□□ -1.13
HDAC6-219ENST00000476625 TAS2R30P59541 319 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms