RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 UBE2L3P68036 154 aaKnown RBP14.95□□□□□ -0.02
LIME1-204ENST00000476183 RGS21Q2M5E4 152 aa14.95□□□□□ -0.02
LIME1-204ENST00000476183 KHDC3LQ587J8 217 aa14.95□□□□□ -0.02
LIME1-204ENST00000476183 FAM210BQ96KR6 192 aa14.95□□□□□ -0.02
LIME1-204ENST00000476183 SLC25A5P05141 298 aaKnown RBP14.94□□□□□ -0.02
LIME1-204ENST00000476183 M6PRP20645 277 aa14.94□□□□□ -0.02
LIME1-204ENST00000476183 TAS2R45P59539 299 aa14.94□□□□□ -0.02
LIME1-204ENST00000476183 RANP62826 216 aaKnown RBP14.94□□□□□ -0.02
LIME1-204ENST00000476183 CD300CQ08708 224 aa14.94□□□□□ -0.02
LIME1-204ENST00000476183 ACOT6Q3I5F7 207 aaPredicted RBP14.94□□□□□ -0.02
LIME1-204ENST00000476183 TMEM88Q6PEY1 159 aa14.94□□□□□ -0.02
LIME1-204ENST00000476183 NOP10Q9NPE3 64 aaKnown RBP14.94□□□□□ -0.02
LIME1-204ENST00000476183 TIMM8BQ9Y5J9 83 aaPredicted RBP14.94□□□□□ -0.02
LIME1-204ENST00000476183 DNAH2Q9P225 4427 aa14.93□□□□□ -0.02
LIME1-204ENST00000476183 C7orf71A4D174 169 aa14.93□□□□□ -0.02
LIME1-204ENST00000476183 CRISP2P16562 243 aa14.93□□□□□ -0.02
LIME1-204ENST00000476183 BTN1A1Q13410 526 aa14.93□□□□□ -0.02
LIME1-204ENST00000476183 ASB13Q8WXK3 278 aa14.93□□□□□ -0.02
LIME1-204ENST00000476183 Q9H3A6 140 aa14.93□□□□□ -0.02
LIME1-204ENST00000476183 ZNF324O75467 553 aaPredicted RBP14.92□□□□□ -0.02
LIME1-204ENST00000476183 PRR9Q5T870 116 aa14.92□□□□□ -0.02
LIME1-204ENST00000476183 LYPD1Q8N2G4 141 aa14.92□□□□□ -0.02
LIME1-204ENST00000476183 ZFAND2AQ8N6M9 145 aa14.92□□□□□ -0.02
LIME1-204ENST00000476183 HSD17B11Q8NBQ5 300 aa14.92□□□□□ -0.02
LIME1-204ENST00000476183 P0DMU3 169 aa14.91□□□□□ -0.02
LIME1-204ENST00000476183 FAM231AP0DMU4 169 aa14.91□□□□□ -0.02
LIME1-204ENST00000476183 FAM231CP0DMU5 169 aa14.91□□□□□ -0.02
LIME1-204ENST00000476183 ZNF266Q14584 549 aa14.91□□□□□ -0.02
LIME1-204ENST00000476183 TMEM78Q5T7P6 136 aa14.91□□□□□ -0.02
LIME1-204ENST00000476183 CCDC28AQ8IWP9 274 aa14.91□□□□□ -0.02
LIME1-204ENST00000476183 PYGO2Q9BRQ0 406 aa14.91□□□□□ -0.02
LIME1-204ENST00000476183 ZNF492Q9P255 531 aa14.91□□□□□ -0.02
LIME1-204ENST00000476183 RNF222A6NCQ9 220 aa14.9□□□□□ -0.02
LIME1-204ENST00000476183 G3V3Q6 166 aa14.9□□□□□ -0.02
LIME1-204ENST00000476183 HMGB3O15347 200 aaKnown RBP14.9□□□□□ -0.02
LIME1-204ENST00000476183 ATP6V0CP27449 155 aa14.9□□□□□ -0.02
LIME1-204ENST00000476183 RNASE4P34096 147 aaKnown RBP14.9□□□□□ -0.02
LIME1-204ENST00000476183 Q6ZQT7 251 aa14.9□□□□□ -0.02
LIME1-204ENST00000476183 LINC00612Q8N6U2 182 aa14.9□□□□□ -0.02
LIME1-204ENST00000476183 POM121L12Q8N7R1 296 aa14.9□□□□□ -0.02
LIME1-204ENST00000476183 OR10G4Q8NGN3 311 aa14.9□□□□□ -0.02
LIME1-204ENST00000476183 OR10G9Q8NGN4 311 aa14.9□□□□□ -0.02
LIME1-204ENST00000476183 OR10G7Q8NGN6 311 aa14.9□□□□□ -0.02
LIME1-204ENST00000476183 OR2G3Q8NGZ4 309 aa14.9□□□□□ -0.02
LIME1-204ENST00000476183 Q8TAT8 98 aa14.9□□□□□ -0.02
LIME1-204ENST00000476183 FXYD6-FXYD2A0A087WZ82 144 aa14.89□□□□□ -0.03
LIME1-204ENST00000476183 A0A1W2PPV4 95 aa14.89□□□□□ -0.03
LIME1-204ENST00000476183 CBY3A6NI87 242 aa14.89□□□□□ -0.03
LIME1-204ENST00000476183 GPX1P07203 203 aa14.89□□□□□ -0.03
LIME1-204ENST00000476183 OR2T35Q8NGX2 323 aa14.89□□□□□ -0.03
LIME1-204ENST00000476183 PSMG3Q9BT73 122 aaPredicted RBP14.89□□□□□ -0.03
LIME1-204ENST00000476183 DIRC3C9JPN6 131 aa14.88□□□□□ -0.03
LIME1-204ENST00000476183 F5H768 121 aa14.88□□□□□ -0.03
LIME1-204ENST00000476183 ATP5G1P05496 136 aa14.88□□□□□ -0.03
LIME1-204ENST00000476183 NMBP08949 121 aa14.88□□□□□ -0.03
LIME1-204ENST00000476183 CSN1S1P47710 185 aa14.88□□□□□ -0.03
LIME1-204ENST00000476183 ATP5G3P48201 142 aa14.88□□□□□ -0.03
LIME1-204ENST00000476183 ZNF138P52744 262 aa14.88□□□□□ -0.03
LIME1-204ENST00000476183 PQLC2Q6ZP29 291 aa14.88□□□□□ -0.03
LIME1-204ENST00000476183 SH3BGRL3Q9H299 93 aa14.88□□□□□ -0.03
LIME1-204ENST00000476183 TNFSF18Q9UNG2 199 aa14.88□□□□□ -0.03
LIME1-204ENST00000476183 RBAKDNA6NC62 111 aa14.87□□□□□ -0.03
LIME1-204ENST00000476183 C11orf72Q8NBR9 251 aa14.87□□□□□ -0.03
LIME1-204ENST00000476183 INO80EQ8NBZ0 244 aaPredicted RBP14.87□□□□□ -0.03
LIME1-204ENST00000476183 LINC00467Q9BRT7 94 aa14.87□□□□□ -0.03
LIME1-204ENST00000476183 OTORQ9NRC9 128 aa14.87□□□□□ -0.03
LIME1-204ENST00000476183 DNAH17Q9UFH2 4485 aa14.87□□□□□ -0.03
LIME1-204ENST00000476183 PGPA6NDG6 321 aa14.86□□□□□ -0.03
LIME1-204ENST00000476183 SNURFLB1AK76 121 aa14.86□□□□□ -0.03
LIME1-204ENST00000476183 CDC34P49427 236 aaPredicted RBP14.86□□□□□ -0.03
LIME1-204ENST00000476183 RPL7L1Q6DKI1 246 aaKnown RBP14.86□□□□□ -0.03
LIME1-204ENST00000476183 HYLS1Q96M11 299 aa14.86□□□□□ -0.03
LIME1-204ENST00000476183 FAT2Q9NYQ8 4349 aa14.86□□□□□ -0.03
LIME1-204ENST00000476183 TRBV7-9A0A0J9YWB2 115 aa14.85□□□□□ -0.03
LIME1-204ENST00000476183 STAG3L2P0CL84 134 aa14.85□□□□□ -0.03
LIME1-204ENST00000476183 STAG3L3P0CL85 134 aa14.85□□□□□ -0.03
LIME1-204ENST00000476183 ARL14EPLP0DKL9 152 aa14.85□□□□□ -0.03
LIME1-204ENST00000476183 EIF4E3Q8N5X7 224 aaKnown RBP14.85□□□□□ -0.03
LIME1-204ENST00000476183 RXFP4Q8TDU9 374 aa14.85□□□□□ -0.03
LIME1-204ENST00000476183 RAB24Q969Q5 203 aa14.85□□□□□ -0.03
LIME1-204ENST00000476183 GSN-AS1Q9NRJ2 163 aa14.85□□□□□ -0.03
LIME1-204ENST00000476183 NACAE9PAV3 2078 aa14.85□□□□□ -0.03
LIME1-204ENST00000476183 HECTD4Q9Y4D8 3996 aa14.84□□□□□ -0.03
LIME1-204ENST00000476183 GAGE12BA1L429 117 aa14.84□□□□□ -0.03
LIME1-204ENST00000476183 GAGE7O76087 117 aa14.84□□□□□ -0.03
LIME1-204ENST00000476183 GAGE12FP0CL80 117 aa14.84□□□□□ -0.03
LIME1-204ENST00000476183 GAGE12GP0CL81 117 aa14.84□□□□□ -0.03
LIME1-204ENST00000476183 GAGE12IP0CL82 117 aa14.84□□□□□ -0.03
LIME1-204ENST00000476183 SERF2P84101 59 aa14.84□□□□□ -0.03
LIME1-204ENST00000476183 DAZ2Q13117 558 aaKnown RBP14.84□□□□□ -0.03
LIME1-204ENST00000476183 ANXA2RQ3ZCQ2 193 aa14.84□□□□□ -0.03
LIME1-204ENST00000476183 Q6ZTI0 123 aa14.84□□□□□ -0.03
LIME1-204ENST00000476183 C15orf53Q8NAA6 179 aa14.84□□□□□ -0.03
LIME1-204ENST00000476183 TP53TG3Q9ULZ0 132 aa14.84□□□□□ -0.03
LIME1-204ENST00000476183 UBE2DNLQ8IWF7 75 aa14.83□□□□□ -0.04
LIME1-204ENST00000476183 ZNF680Q8NEM1 530 aa14.83□□□□□ -0.04
LIME1-204ENST00000476183 RPH3ALQ9UNE2 315 aa14.83□□□□□ -0.04
LIME1-204ENST00000476183 IGHV1OR15-1A0A075B7D0 117 aa14.82□□□□□ -0.04
LIME1-204ENST00000476183 MBP02144 154 aa14.82□□□□□ -0.04
LIME1-204ENST00000476183 SSX7Q7RTT5 188 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms